LOCUS AK128795 3970 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ45485 fis, clone BRTHA2002661, highly similar
to Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26
(DDX26), mRNA.
ACCESSION AK128795
VERSION AK128795.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3970)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..3970
/clone="BRTHA2002661"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000048668"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 304..2433
/codon_start=1
/note="highly similar to Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA"
/protein_id="BAG54738.1"
/translation="MSVESEQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLES
LVQKVQSGVVINFEKAGPDPSPVEDGQPDISRPFGSQPWHSCHKLIYVRPNPKTGVPI
GHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPLTQFI
LERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDL
FKVHKAKPTLKWRQSFESYLKTMPPYYLGPLKKAVRMMGAPNLIADSMEYGLSYSVIS
YLKKLSQQAKIESDRVIGSVGKKVVQETGIKVRSRSHGLSMAYRKDFQQLLQGISEDV
PHRLLDLNMKEYTGFQVALLNKDLKPQTFRNAYDIPRRNLLDHLTRMRSNLLKSTRRF
LKGQDEDQVHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMI
DEADEFVAGPQNKHKRPGEPNMQGIPKRRRCMSPLLRGRQQNPVVNNHIGGKGPPAPT
TQAQPDLIKPLPLHKISETTNDSIIHDVVENHVADQLSSDITPNAMDTEFSASSPASL
LERPTNHMEALGHDHLGTNDLTVGGFLENHEEPRDKEQCAEENIPASSLNKGKKLMHC
RSHEEVNTELKAQIMKEIRKPGRKYERIFTLLKHVQGSLQTRLIFLQNVIKEASRFKK
RMLIEQLENFLDEIHRRANQINHINSN"
BASE COUNT 1311 a 756 c 745 g 1158 t
ORIGIN
1 aaaaaccttc aggctgaagg acttacgact cttggccaat ccctaaggac agcttttgat
61 ttattaaatt taaatagatt agtaactggc atagacaact atgggcaggg aagaaaccct
121 tttttcttgg agccagcaat aattatcaca attactgatg ggagcaagtt gactaccacc
181 agtggagtcc aggatgagct tcatttacct cttaattctc ctttgcctgg aagtgaattg
241 accaaggaac cttttcgttg ggatcagaga ctctttgcat tagtgttgcg gttgcctggc
301 accatgtcag tagaatcaga acagttgaca ggtgtgcctt tagatgactc tgcaatcaca
361 ccaatgtgtg aagtgacagg cggccgttca tattctgtgt gttctccaag aatgcttaat
421 cagtgtctgg agtccttggt gcagaaagta caaagtgggg tggtaataaa ctttgaaaaa
481 gcaggaccag atccttcccc tgtagaagat gggcagccag atatatcaag gccttttgga
541 tctcagcctt ggcatagctg tcacaaactc atatatgtca gaccaaatcc taaaactggg
601 gttcctatag gtcattggcc tgttccagag tctttttggc cagatcaaaa ttcgccaaca
661 ctaccacctc gtacatctca tcctgtagtg aagttttcct gtacagactg tgaaccaatg
721 gttattgata aacttccttt tgacaaatat gagttggaac cttcaccact gactcaattt
781 atcctggaaa ggaaatctcc tcaaacatgt tggcaggtgt acgtgagcaa tagtgcaaaa
841 tacagtgaac ttggtcatcc ttttggttac ttgaaagcca gtacagcact gaactgtgtc
901 aacttatttg tgatgcctta caattatcca gtccttcttc ccctcttaga tgacttgttt
961 aaagtgcata aagcaaaacc aacattgaag tggagacagt catttgaaag ttatttgaag
1021 acaatgcctc cctactatct tgggcccttg aagaaagctg ttaggatgat gggagcacct
1081 aacctaatag cagacagtat ggaatatgga cttagttaca gtgtcatttc atacctcaaa
1141 aaactgagtc aacaggccaa aatagaatct gatcgagtca ttggatctgt aggcaaaaaa
1201 gtagtacagg agactggaat aaaagtccgg agccgatcac atggtttatc aatggcatat
1261 aggaaagatt ttcaacaact cctccaggga atttcagagg atgtccctca cagactgcta
1321 gaccttaata tgaaggaata cactgggttc caagttgctt tgctgaataa ggatttgaag
1381 ccacagacat ttagaaatgc ttatgacata ccaagacgaa atcttttgga tcacttaaca
1441 agaatgagat ctaatctttt gaagagcact cgcagatttc tgaaaggaca ggacgaagat
1501 caagtgcaca gtgttcctat agcacaaatg gggaactacc aggaatacct caagcaagta
1561 ccttctccac taagagaact tgatcctgat cagccacgaa ggttgcatac atttggcaac
1621 ccctttaagc tggataagaa gggtatgatg atagatgaag cagatgaatt tgtggctgga
1681 cctcaaaata aacataaacg acccggagaa ccaaatatgc aagggatccc taaaagacgt
1741 cggtgtatgt ctccactact aagaggcaga cagcagaatc ctgttgtaaa caatcatatt
1801 gggggaaaag gaccacctgc acctacaact caagcacagc cagatcttat taaacctctt
1861 cctcttcata aaatttcaga aaccactaat gattcgataa tacatgatgt ggttgaaaat
1921 catgttgcag accaactttc atcagacatt acaccaaatg ctatggatac ggaattttca
1981 gcatcttctc cagccagttt actggaacgg ccaaccaatc atatggaggc tcttggtcat
2041 gaccatttag gaaccaatga cctcactgtt ggtggatttt tagaaaatca tgaggagcca
2101 agagataaag aacaatgtgc tgaagagaac ataccagcat cttcactcaa caaaggaaag
2161 aaattgatgc attgcagaag ccatgaagag gtcaatactg aactaaaagc acaaataatg
2221 aaagagatcc gaaagccagg aagaaaatat gaaagaatct tcactttact gaagcatgtg
2281 caaggcagtt tacaaacaag actaatattt ttacaaaatg tcattaaaga agcatcaagg
2341 tttaaaaaac gaatgctaat agaacaactg gagaacttct tggatgaaat tcatcgaaga
2401 gccaatcaga tcaaccatat taatagcaat taaaagaaaa tagaatgtgg ccacttattt
2461 cactatcttc ttcaaataca aagtaaatac aagactgttg tgatcttgca ttcattttcc
2521 gacatgcatt gttggctatt tgaaatacta aaagcaaatc tacagatcct ttttccatca
2581 ttttacagtg accttttctt cattttggtt tatttttgta atgtgaaaag tatcactcta
2641 aaaaacattt ttaatttaac aaactaaaaa tattcctcca aatctcttgc ttgtcattga
2701 ctcttgcgtg tcaatttccc tcaggttcta ttttcttaaa ccaaccttta aaattgtcac
2761 ctctgttaag gttgaacttt gccaaaaaaa aaaaaaaaaa aaaaaaaaaa aagaagttac
2821 tttgtaattt ttggggaaaa aagcacatac attaaaacta ggtaatgttt tgtatataca
2881 gttattttgg atatattatt gtaagttgta caaatgtatt ttgaagaata tttaagaaaa
2941 gcacttttgt tattccatca ataaatgctc tattttactc ttgtgtggtt taggaaataa
3001 tcacatttaa agtaatcatt taaaaacatc ctaagataat ggaattttaa aggccttgct
3061 ttttagcatt ggaaaaatac accacttgaa gttcatgttt gttaagccta actgtaatta
3121 catgttacat aatctgcatt gcctttttac tatatgttcg tagtttttgt tggccatgcc
3181 aacatactcc catttctgcc tagattatgg gaatgacttt gtatggggca gatagacaga
3241 tactttaaaa gctatttaaa aagcaaacaa ctttggatat tattggtttc cttacttcaa
3301 caccttttcc tttatcacta ggattgtgga tggcacgaag ctgaagctgt tagggagtgg
3361 taggtttgga gtacagtaca tgctctgaaa tatctagcct ttagcagctt catgccatgc
3421 ttgcaaaagc ccacaacaaa ttggaggcct ccttgttctg ctctgctgtt ctcacactta
3481 aactctgttt tatttataag ctaaatggaa aggaaacacc tttaagatga ctttgctcat
3541 tttgcatccc ccctgagttt cacaggataa ggaaaaccac gctattcatt ctccaccctc
3601 aattcaacat ggcctagagt atccgtactg aggaagcaat cttatggcct gactcactca
3661 ccattcatga tcactgctgt gccttttagt ggtttggggg gtaagcagta gaaaagaagg
3721 tcaaaataga tttggattaa gagtaggcaa aataaactta taacatttaa aaactgaagt
3781 atttttaggt ttataatatt gaaaatcaca tacccttagc tttttacact ttatcagaca
3841 tttttttaaa tttcaagggt atagcaaaat gaaattataa ctttatgaag aaaagcattg
3901 atgaaagtgg agaacatgca tttagtctag gggatttgaa actctcccaa tactgaagac
3961 aaaccctgtc
//