LOCUS AK127724 3543 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ45824 fis, clone NT2RP8003490, highly similar
to LIM homeobox transcription factor 1 alpha.
ACCESSION AK127724
VERSION AK127724.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3543)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..3543
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8003490"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000047597"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 384..1532
/codon_start=1
/note="highly similar to LIM homeobox transcription
factor 1 alpha"
/protein_id="BAG54558.1"
/translation="MLDGLKMEENFQSAIDTSASFSSLLGRAVSPKSVCEGCQRVILD
RFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEKLFAVKCGGCFEAIA
PNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKERELLSLVSP
AASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRTILTTQQRRAFKASFEVSS
KPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQQDQQNTQRLSSAQTN
GGGSAGMEGIMNPYTALPTPQQLLAIEQSVYSSDPFRQGLTPPQMPGDHMHPYGAEPL
FHDLDSDDTSLSNLGDCFLATSEAGPLQSRVGNPIDHLYSMQNSYFTS"
BASE COUNT 869 a 861 c 972 g 841 t
ORIGIN
1 agaagctgca ggatccgccc cggcgaagca gggccgactc gcacccagga ccctgggcct
61 ctgccttccc tcctagcctt ggagaagcaa ctggccctct cctcccgctg aggagcgacg
121 cgggctggta ggacgtcccg ggaaggccgg cagctcgcga ccacgtcccg gcccagcctg
181 ggcgcgccga ggagcagagc cagcggccgg ctttcgctcc ggctccctcc ccggcgctcc
241 gaagccgagg gcggctcctc cggctgcagt ctcgggggcg acgccttccc gggcagaagc
301 ttccagcagc gctccgcaac ttctctctgc tccagtcact gggagagagc tcgcctacca
361 ggtcctcccg gcccggcccg aacatgctgg acggcctaaa gatggaggag aacttccaaa
421 gcgcgatcga cacctcggcc tccttctcct cgctgctggg cagagcggtg agccccaagt
481 ctgtctgcga gggctgtcag cgggtcatct tggacaggtt tctgctgcgg ctcaacgaca
541 gcttctggca tgagcagtgc gtgcagtgcg cctcctgcaa agagcccctg gagaccacct
601 gcttctaccg ggacaagaag ctgtactgca agtatgacta cgagaagctg tttgctgtta
661 aatgtggggg ctgcttcgag gccatcgctc ccaatgagtt tgttatgcgg gcccagaaga
721 gtgtatacca cctgagctgc ttctgctgct gtgtctgcga gcgacagctt cagaagggtg
781 atgagtttgt cctgaaggag gggcagctgc tctgcaaagg ggactatgag aaggagcggg
841 agctgctcag cctggtgagc ccagcagcct cagactcagg taaaagtgat gatgaagaaa
901 gtctctgcaa gtcagcccat ggggcaggga aaggaactgc tgaggaaggc aaggaccata
961 agcgccccaa acgtccgaga accatcttga caactcaaca gaggcgagca ttcaaggcct
1021 catttgaagt atcctccaag ccctgcagga aggtgagaga gactctggct gcagagacag
1081 ggctgagtgt ccgtgtcgtc caggtgtggt tccaaaacca gagagcgaag atgaagaagc
1141 tggccaggcg acagcagcag cagcagcaag atcagcagaa cacccagagg ctgagctctg
1201 ctcagacaaa cggtggtggg agtgctggga tggaaggaat catgaacccc tacacggctc
1261 tgcccacccc acagcagctc ctggccatcg agcagagtgt ctacagctca gatcccttcc
1321 gacagggtct caccccaccc cagatgcctg gagaccacat gcacccttat ggtgccgagc
1381 cccttttcca tgacctggat agcgacgaca cctccctcag taacctgggt gactgtttcc
1441 tagcaacctc agaagctggg cctctgcagt ccagagtggg aaaccccatt gaccatctgt
1501 actccatgca gaattcttac ttcacatctt gagtcttccc ctagagttct gtgactaggc
1561 tcccatatgg aacaaccata ttctttgagg ggtcactggc tttaggacag ggaggccagg
1621 gaagaggtgg gttggggagg gagttttgtt ggggatgctg ttgtataatg atatggtgta
1681 gctcagcatt tccaaagact gaatacatta tggattgcat agtttaatgt ttctaataag
1741 agtcttagca ttagatatga agacgtgttt atcattaagg acagagactt ttaatataga
1801 cattctcatg caaactagat acttagggac tcctaacaac ttcccaccat gtcggggaag
1861 ctcttgtcaa gaggtgcata tgtctatcca tctacacacc aatagacaga aggacagata
1921 gatagatgtg tgtgtgtgag tgtgtaacct ttcgtatttt accctcaaag tttattccta
1981 attataacag acaccaactg tacagcaaaa gtaactttat tttcagtgtg aactatattt
2041 aaggaaatgc ttgatgcact taagttataa aatgagataa tttactttta taaactttat
2101 ttttagcttg acaagacttg tcagcagggc agagagggct gctccaccta gccccatagc
2161 tttgagtgct ggggttcatt ctgttttcag agtgtctttc agatctggaa agaaattctg
2221 tgtggctgat ggtgttctct cttgcattct tgctctcttt ggggttgaat cactgggcag
2281 gggtgggaca gaataatctc tgatcatgtt ctgagaaaat gtaaagccca gactcctggg
2341 ctttctttta aattctgaca agtggttgtt gggcagtgct aggatgattg gttcagctct
2401 tgagcttcag catctgcaaa tgtggatgag gctaatagta tgtacctacc tcactgggaa
2461 acaccaaggc ttaattcatt cccaggacac atgagcaggg ctgagactaa tatctgatat
2521 ttgtttaaga tacaaccagg ccactcactt ggcaaaggag ggtacatagg gttgcagagc
2581 aggagggctc ctgaactcca gagggcagtc tgcctgctga agtccctctg caaagcctgt
2641 gctgaaggag acaccagctc agagcagttc agagggatcc cagagtccca gagtggggag
2701 gaggtgaagg ctgaggggat agaggagggc ctggtggtgt tctagagcag ggttgggcaa
2761 actcctgctt gcgggcctgc tttctatggc ttgccagcaa agaatggttt ttactttttt
2821 tttgaggtca ttaaaaaaaa ggagaagaag aatatataac aggctgtctg tggcctggaa
2881 agcctgaaat atttgctatc tgtattgtct ggcccttaca gaaaaagttt ggggcccctt
2941 gttttagagg gtctgtttct aaagaacctc atggcgctca tagaggcaga aggttccagt
3001 ggaaaccctt ggctcttcct tccaactcac tcctctgatc ctcggcacag aagacccagc
3061 agccattgta catggggaca gttccacacc ctggtctcca gttgcggtgc taggatggta
3121 ttgttctgtg ctaggaagtc tcctgggaac ccagaatgag ttggtgggga agacagcggg
3181 tcactgtgga cccatccagg aggggccagg ataggcttgg cctcatttct ggggacatca
3241 ttggagactt gaacacagag acacgtccct atcactctgg caaggccaga gggaacatgt
3301 ccccttatgg tagagtctat gttgtgtgat ttttgtgctc ttgtttataa tttatgcaaa
3361 ccaccaagaa acccaaacca gtctgatgag tgaaaattat gcagatgctg tatggcccca
3421 caggtttctg tggtaaagac cagttggaga atgtaggaga tactatgtga gtgaaaatga
3481 atagagatcc ttattccact ccttaatggc ataccaagat gaaattaaaa tctcttacaa
3541 atg
//