LOCUS AK127345 3573 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ45417 fis, clone BRHIP3033811, highly similar
to Sorting nexin-9.
ACCESSION AK127345
VERSION AK127345.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3573)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kanehori,K., Ishibashi,T., Chiba,Y., Fujimori,K., Hiraoka,S.,
Tanai,H., Watanabe,S., Ishida,S., Ono,Y., Hotuta,T., Watanabe,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Takahashi-Fujii,A., Oshima,A.,
Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..3573
/clone="BRHIP3033811"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000047218"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 720..1907
/codon_start=1
/note="highly similar to Sorting nexin-9"
/protein_id="BAG54490.1"
/translation="MKIPLNKFPGFAKPGTEQYLLAKQLAKPKEKIPIIVGDYGPMWV
YPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWLYERLLVKFG
SAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEK
EWKTGKRKAERDELAGVMIFSTMEPEAPDLDLVEIEQKCEAVGKFTKAMDDGVKELLT
VGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTYEEIAS
LVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDKLVATSKITLQDK
QNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRF
PVM"
BASE COUNT 1002 a 789 c 823 g 959 t
ORIGIN
1 tggctatttc tgttttttcc tctggagttt gtttctctgg ctgtatgact tgcatgatac
61 ttaatccatt ctttctgtgc tgcttatagt tatttttagg gtttcattaa tactgtatca
121 tgatgccaaa caacagactt tagaaaatat aatgcattga agataaccca ttgctacaca
181 gttggggctt tttgcatgta atgtttgtga gtgagtggca tgctagagtt ttctggagaa
241 tttggtcctg ccatgaatgt gctggtttta gttaaaaact ttgacctgct ttttcactct
301 tgttcactgg gcaccttttt tattttaagg tggatatttt ggctcagatt ggttgtgtcg
361 aaagtctcag ccagtcacca ccttcttctc cttctccttc tccttcttcc atatataagg
421 ttggcagtgg caatgacccc tggtcagcct ggagtgcctc caaatctggg aactgggaaa
481 gctcagaagg ctggggggcc cagccagagg gggctggagc ccaaagaaac acaaacactc
541 ccaacaactg ggacactgcc ttcggccacc cccaggccta ccaaggacca gcaactggtg
601 atgatgatga ctgggatgaa gactgggatg ggcccaaatc ctcttcctac tttaaggatt
661 cagagtcagc tgatgcaggc ggcgctcagc gaggaaacag tcgtgctagt tcctcatcca
721 tgaaaattcc ccttaacaaa tttcctggat ttgcgaaacc tggcacggaa cagtatttgt
781 tggccaaaca actagcaaaa cccaaagaga aaattcccat cattgttgga gattatggcc
841 caatgtgggt ttatcctacc tctacttttg actgtgtggt agcagatccc agaaaaggct
901 ccaaaatgta tggtctaaag agctacatcg aatatcagct aacacctact aacactaatc
961 gatctgtaaa ccacaggtat aagcactttg actggttata tgagcgtctc ctggttaagt
1021 ttgggtcagc cattccaatc ccttctcttc cagacaaaca agtcacaggc cgctttgaag
1081 aggaatttat caaaatgcgc atggagagac ttcaggcctg gatgaccagg atgtgtcgcc
1141 atccagtaat ctcagaaagt gaagttttcc agcagttcct aaatttccga gatgagaagg
1201 aatggaaaac tggaaagagg aaggccgaga gagatgagct ggcgggagtc atgatatttt
1261 ccaccatgga accagaggca cctgacttgg acttagtaga aatagagcag aagtgcgagg
1321 ctgtggggaa gttcaccaag gccatggatg acggcgtgaa ggagctgctg acggtggggc
1381 aggagcactg gaagcgctgc acgggcccat tacccaagga atatcagaag ataggaaagg
1441 ccttgcagag tttggccaca gtgttcagtt ccagtggcta tcaaggtgaa acagatctca
1501 atgatgcaat aacagaagca ggaaagactt atgaagaaat tgccagtctc gtggcagaac
1561 agccaaagaa agatctccat ttcctgatgg aatgtaatca cgagtataaa ggttttcttg
1621 gctgcttccc tgacatcatt ggcactcaca agggagcaat agaaaaagtg aaagaaagtg
1681 acaaactagt tgcaacaagt aaaatcaccc tacaagacaa acagaacatg gtgaagagag
1741 tcagcatcat gtcttacgcg ttgcaagctg agatgaatca ctttcacagt aaccggatct
1801 atgattacaa cagtgtcatc cgcctgtacc tggagcagca agtgcaattt tacgaaacga
1861 ttgcagaaaa gctgaggcag gccctcagcc gctttccagt gatgtaggac agaacgggcc
1921 ttgaagagaa tgccgcgtgc tttctcctga cttggggcaa tgcaattcaa aacttttttt
1981 cccctattat tcagaaaaaa aaggaaacaa aaccaaaaag aaagagttgc aaaaaactgc
2041 atttatttta ttagccaccc taaatgcgtc agttatttag ggatggtctt ttgttcattt
2101 ccgcatccat tatttaaacc agtggaaatt gtctctattt ttggaaagta cttaaaagtt
2161 accagaattt tcaatggaaa atgaggggtt tctccccact gatattttac atagagtcat
2221 aatttatatg tcttataaat tataagtctt atataattta taagtctccc acaatcttcc
2281 agttcttacc cagtgtcaga taattaatta ctaattactt tcttaaaaac atgaactatg
2341 ccagaataaa aaatatctat gtttgtatat ttttataact cctttcagtc ctctggggct
2401 cctgtcattg agggaagtcg ttacgccttt cactgccaca gttacagctc aagtgcttac
2461 acttcaagag ggaggacgct gggggcccct ggggctgcta gtgccatcgt ggtgtgtggc
2521 aggtgggcca tcccatgtcc ctccaggggg accccacagc ctggcagatg agcagatacc
2581 cctggccacc catgtcctca gcgacatttc tgatgtgctg ctcttatgtg aggaccagtg
2641 ctttctctct ttgcacttcc ttcctaatct tggttaaggc atgttttatg ccatgaagaa
2701 tacattagaa gaattgaggg actttgtaga gaattttgtg gctttggtcc aacgggtgag
2761 tggctgtgcg gaggcctgtg ttcgggaggg cctgggggaa ggagggcacc cagcaccccg
2821 gcgtctctgg ccctttctta ttctttggct cctcatccac cgtgatgaga agcgctgctg
2881 tggccacggc acactgcttg gcttgggtgg cgggttcatg gccagttggt gtcatcagca
2941 aagagaaaaa gcacaggtta gctccccatt agatggaaaa gtgtagggac tgagaagggc
3001 tgcagcctca gcagtgtaga gagtccccgg cgctctgagg ttggagagaa agaacagacc
3061 agcgcccttc ctgactacat ccgaaacttc acacagggtg tttccgagca ccagcacttc
3121 cagcgcttca cttaacggca taaagcaaaa caggaccttg gcacaccgtc agctcgaact
3181 caacactggc agccaccgtc tcacccctgc ggaggagcgc tcccgtctcc cacaggtgcc
3241 ttaccgcgtt ccctcccgct gctttcattt ttctgaccta ataattacgg gaaatggaaa
3301 gtctgggcca gcatcaataa aatgacacca aaaataagta gatgaaatca aatgaatatg
3361 agaacatctt gttcttcaat atcacgggtt tttgttaatg tttcataagt aattctcccc
3421 acttgatttt tcttctataa aatcccatag aacaatgttt atgctatagc catttaatat
3481 atgtacaaat tgtaaagaat atgtataaat gttttacacg aatgtaagag catgtagaag
3541 ccaacatata aataaattgt ttaaaaaaac tgt
//