LOCUS AK127269 5395 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ45336 fis, clone BRHIP3007609, highly similar
to Jumonji/ARID domain-containing protein 1D.
ACCESSION AK127269
VERSION AK127269.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5395)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..5395
/clone="BRHIP3007609"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000047142"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 2063..4171
/codon_start=1
/note="highly similar to Jumonji/ARID domain-containing
protein 1D"
/protein_id="BAG54468.1"
/translation="MWVEHPQGVTEAEREAFELLPDDERQCIKCKTTCFLSALACYDC
PDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWANKVRVALE
VEDGRKRSFEELRALESEARERRFPNSELLQRLKNCLSEVEACIAQVLGLVSGQVARM
DTPQLTLTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGLL
RSLLERGQQLGIEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAK
IASSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETENIPVHLP
NIQALKEALTKAQAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQV
LTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKALGLYQCDTELL
GLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCG
QVPAGVGVLQCDLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMR
SRRPRLETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALASEDVTALLRQ
LAELRQQLQAKPRPEEASVYTSATACDPIREGSGNNISKVQGLLENGDSVTSPENMAP
GKGSGKTGVVWVGCWLNITE"
BASE COUNT 1229 a 1232 c 1349 g 1585 t
ORIGIN
1 ttgcaaatac atttttccat tctgtaggtc gttgccttac tctgttgatg tttccttcat
61 tatgcagaag ctttttagct taatgtaata ccatttgtct gtttttgctt ttgttgctta
121 tacttttgag gtcttaatcc acaaaattct tgccaagatc aatgtcatgg agctttcctc
181 ttatgtcttc ttttagtagt ttgataattt tggattttac atattttaca tttaagtttt
241 tacttccttt ggggttggtt tttgtacatg gtgaaagatg ggtcaagttt catccttttg
301 catgtggata tccaggtttt ccaacaatgg atactgaaga gactttcctt tcctctctgt
361 gtgttcttgg tgtctttgtg gaacttctgt tggctgaaaa tgcagagatt tatttctggg
421 ctattatttt ccatggagct gtgtgtttgt ttttaatggc agtactaagc ccttttagtt
481 actatagctt tgtgatatga tagtaaatta gtgtgaatac tctcagcttt ttgtttgttg
541 gtttgttttg tttcacatat tgctttgggt attttgagtc tttggggttc catatcaatt
601 taagggttgc ttttttgaaa atttctgtga aggatgctgt tatttttgac agggattaaa
661 ttgaatttct agatcagttt ggatagtatg gacattttag caatattaat tcttgtggtc
721 tgtgaggaca aggtgtctta aaatttcttt gtgtgttctt cagtttactt catcattatt
781 tgtatagttt gcagtgtagt tattttttta cctctttaaa tttattgcta gagatttttt
841 tcagctgtta caaatgaagt ttttattttg tttttttcag ataattttct actaatgtat
901 acaaacacca ctgattttta tattgatttt gtatcctgca aatttactga atttgttagt
961 tctaacacca tttttacgga ggccttagca tcctcttaaa aaagaagtgt tttctttaag
1021 acttttttat aaatcttcaa acagggataa cataactttc tcttttccaa tttgaatgtt
1081 tttttaattt cttttcctgc ctcattgctc tggctgggac ctccggcact gtgttagttg
1141 acagtggcaa aacagggcat tatttttgag tttacaatat ggacctcttg tgaccaggaa
1201 taccagaggc agcatgttct aagacacagt tgtcttctta tgtatgtttt gctcagtttg
1261 cctctcctca tcgtatccta ctccctactc actctggcaa atctctgacc caacaggagt
1321 atgcgaccag tggttggaac ctgaatgtga tgccagtgct agatcagtct gttctctgtc
1381 acatcaatgc agacatctca ggcatgaagg tgccctggct gtacgtgggc atggttttct
1441 cagcattttg ttggcatatt gaggatcact ggagttactc tattaactat ctgcattggg
1501 gtgagccgaa gacctggtat ggtgtaccct ccctggcagc agagcatttg gaggaggtga
1561 tgaagatgct gacacctgag ctgtttgata gccagcctga tctcctacac cagcttgtca
1621 ctctcatgaa tcccaacact ttgatgtccc atggtgtgcc agttgtccgc acaaaccagt
1681 gtgcagggga gtttgtcatc acttttcctc gtgcttacca cagtggtttt aaccgaggct
1741 acaattttgc tgaagctgtc aacttttgta ctgctgactg gctacctgct ggacgccagt
1801 gcattgaaca ctaccgccgg ctccggcgct attgtgtctt ctcccacgag gagctcatct
1861 gcaagatggc tgccttccca gagacgttgg atctcaatct agcagtagct gtgcacaagg
1921 agatgttcat tatggttcag gaggagcgac gtctacgaaa ggcccttttg gagaagcttt
1981 ccttacaagg ttgagtccac atcagggctc agtgttggct gaggtggggt gtccacaacc
2041 ctactcctag tctttacagt atatgtgggt tgaacacccc cagggcgtca cggaggctga
2101 gcgagaggct tttgagctgc tcccagatga tgaacgccag tgcatcaagt gcaagaccac
2161 gtgcttcttg tcagccctgg cctgctacga ctgcccagat ggccttgtat gcctttccca
2221 catcaatgac ctctgcaagt gctctagtag ccgacagtac ctccggtatc ggtacacctt
2281 ggatgagctc cccaccatgc tgcataaact gaagattcgg gctgagtctt ttgacacctg
2341 ggccaacaaa gtgcgagtgg ccttggaggt ggaggatggc cgtaaacgca gctttgaaga
2401 gctaagggca ctggagtctg aggctcgtga gaggaggttt cctaatagtg agctgcttca
2461 gcgactgaag aactgcctga gtgaggtgga ggcttgtatt gctcaagtcc tggggctggt
2521 cagtggtcag gtggccagga tggacactcc acagctgacc ttgactgaac tccgggtcct
2581 tcttgagcag atgggcagcc tgccctgtgc catgcatcag attggggatg tcaaggatgt
2641 cctggaacag gtggaggcct atcaagctga ggctcgtgag gctctggcca cactgccctc
2701 tagtccaggg ctattgcggt ccctgttgga gagggggcag cagctgggta tagaggtgcc
2761 tgaagcccat cagcttcagc agcaggtgga gcaggcgcaa tggctagatg aagtgaagca
2821 ggccctggcc ccttctgctc acaggggctc tctggtcatc atgcaggggc ttttggttat
2881 gggtgccaag atagcctcca gcccttctgt ggacaaggcc cgggctgagc tgcaagaact
2941 actgaccatt gcagagcgct gggaagaaaa ggctcatttc tgcctggagg ccaggcagaa
3001 gcatccacca gccacattgg aagccataat tcgtgagaca gaaaacatcc ctgttcacct
3061 gcctaacatc caggctctca aagaagctct gactaaggca caagcttgga ttgctgatgt
3121 ggatgagatc caaaatggtg accactaccc ctgtctagat gacttggagg gcctggtggc
3181 tgtgggccgg gacctgcctg tggggctgga agagctgaga cagctagagc tgcaggtatt
3241 gacagcacat tcctggagag agaaggcctc caagaccttt ctcaagaaga attcttgcta
3301 cacactgctt gaggtgcttt gcccgtgtgc agacgctggc tcagacagca ccaagcgtag
3361 ccggtggatg gagaaggcgc tggggttgta ccagtgtgac acagagctgc tggggctgtc
3421 tgcacaggac ctcagagacc caggctctgt gattgtggcc ttcaaggaag gggaacagaa
3481 ggagaaggag ggtatcctgc agctgcgtcg caccaactca gccaagccca gtccactggc
3541 accatccctc atggcctctt ctccgacttc tatctgtgtg tgtgggcagg tgccagctgg
3601 ggtgggagtt ctgcagtgtg acctgtgtca ggactggttc catgggcagt gtgtgtcagt
3661 gccccatctc ctcacctctc caaagcccag tctcacttca tctccactgc tagcctggtg
3721 ggaatgggac acaaaattcc tgtgtccact gtgtatgcgc tcacgacggc cacgcctgga
3781 gacaatccta gccttgctgg ttgccctgca gaggctgccc gtgcggctgc ctgagggtga
3841 ggcccttcag tgtctcacag agagggccat tggctggcaa gaccgtgcca gaaaggctct
3901 ggcctctgaa gatgtgactg ctctgttgcg acagctggct gagcttcgcc agcagctaca
3961 ggccaaaccc agaccagagg aggcctcagt ctacacttca gccactgcct gtgaccctat
4021 cagagaaggc agtggcaaca atatttctaa ggtccaaggg ctgctggaga atggagacag
4081 tgtgaccagt cctgagaaca tggctccagg aaagggctct ggtaagacag gtgtggtttg
4141 ggtaggctgt tggctaaaca taactgagtg acccatgtat ttgtcacctc tgttgtggcc
4201 atggaggata agaccaagag tggcctctaa cccagtctgt ccctgcacct ttcaccgcac
4261 caccttccgc ccagacctgg agctactgtc ctcactgttg ccgcagttga ctggccctgt
4321 gttggagctg cctgaggcaa tccgggctcc cctggaggag ctcatgatgg aaggggacct
4381 gcttgaggtg accctggatg agaaccacag catctggcag ctgctgcagg ctggacagcc
4441 tccagacctg gacagaattc gcacacttct ggagctggaa aaatttgaac atcaagggag
4501 tcggacaagg agccgggctc tggagaggcg acggcggcgg cagaaggtgg atcagggtag
4561 aaacgttgag aatcttgttc aacaggagct tcagtcaaaa agggctcgga gctcagggat
4621 tatgtctcag gtgggccgag aagaagaaca ttatcaggag aaagcagacc gtgaaaatat
4681 gttcctgaca ccttccacag accacagccc tttcttgaaa ggaaaccaaa atagcttaca
4741 acacaaggat tcaggctctt cagctgcttg tccttcttta atgcctttgc tacaactctc
4801 ctactctgat gagcaacagt tgtgacagtg gcaccaaagg tcatttgtgg ctgtttttgt
4861 ttgtttgttt cttaaatcct actatctcct ggcctggacc tcagaaggag ctttttgcct
4921 atctataatt tttcactgcc aatttttgat atcctctctc ctagagttac tgttaaaagg
4981 ttggttcgta aagtccacac cccgatgctc agaagtgtct tgccagcaac attcctgcta
5041 gcatacagga gtgatttcct aaaccagttt cattctagtc tgaataggga caaacaaatc
5101 ttgaggaagc ccaagtgcgt acctttattt ttgcccccgc caccctcttt ctatacttca
5161 atttttgttt gttttttgtt tttttgtccc tgtcataaaa tattttggtg cttcaaaact
5221 tgtaccttca ttgtacatcc ttttcttttc tccccttggg tcttattata aaagaagaca
5281 atgtacgttg taattaccaa aaagaatagg gaaaaacaag aatttcatga ctctacctgt
5341 ggtctatctt taatttcatt tcttttgtta aaaataaaac aatgagtatg tttgg
//