LOCUS AK127242 5259 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ45309 fis, clone BRHIP3004725, highly
similar to DNA-binding protein SATB1.
ACCESSION AK127242
VERSION AK127242.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5259)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..5259
/clone="BRHIP3004725"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000047115"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 1741..4032
/codon_start=1
/protein_id="BAG54463.1"
/translation="MDHLNEATQGKEHSEMSNNVSDPKGPPAKIARLEQNGSPLGRGR
LGSTGAKMQGVPLKHSGHLMKTNLRKGTMLPVFCVVEHYENAIEYDCKEEHAEFVLVR
KDMLFNQLIEMALLSLGYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDV
YHVVTLKIQLHSCPKLEDLPPEQWSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISS
IVNSTYYANVSAAKCQEFGRWYKHFKKTKDMMVEMDSLSELSQQGANHVNFGQQPVPG
NTAEQPPSPAQLSHGSQPSVRTPLPNLHPGLVSTPISPQLVNQQLVMAQLLNQQYAVN
RLLAQQSLNQQYLNHPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAGISQAV
FARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQDERER
SLNAASAMGPAPLISTPPSRPPQVKTATIATERNGKPENNTMNINASIYDEIQQEMKR
AKVSQALFAKVAATKSQGWLCELLRWKEDPSPENRTLWENLSMIRRFLSLPQPERDAI
YEQESNAVHHHGDRPPHIIHVPAEQIQQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRL
PPRQPTVASPAESDEENRQKTRPRTKISVEALGILQSFIQDVGLYPDEEAIQTLSAQL
DLPKYTIIKFFQNQRYYLKHHGKLKDNSGLEVDVAEYKEEELLKDLEESVQDKNTNTL
FSVKLEEELSVEGNTDINTDLKD"
BASE COUNT 1414 a 1236 c 1248 g 1361 t
ORIGIN
1 tttttttttc tcgctcgctc ccgttccccg gacgcggcgg atgagccggc cccgctgggg
61 aaggctccgg gcggcggcgg gcggccggga ggaggctgcg tgctcggggc tggggctgcg
121 agcggggtga ttttgtatta aaatgaggag gaggaagaag aggcacccac agcggcagcg
181 gcggcggcgg cggcagcagc agcaggagca gcggcggaga gggctgcagc ccgggcggac
241 gcgcggagcc gagcggggca cggcggcggc agcgacagcg gccgggatga gtcaactaat
301 aatttaatgg gggcagagac ggcagcgagg ggtagagcta gcgagggaga gagcgagaga
361 agcagccccg tccggggact cgcgctcaca ctcacgcaca cacacaaaca cacacacacc
421 tctccctgtg ccacccagca acacccggcc tcgtcacaac aacaacagcc gcggccgccc
481 tctatcctgc ccgggggccc agccgaaagc cagggcgact ctagaggacg ctgcccgccc
541 ccctctttca tttcgggaaa ctcctgatca gttttgtcgg ggtttctggg tttcttttcc
601 cccaaagtcc tagtgccatt gtggtgctcg ttgtttacct cggactctgg acgagtgaga
661 gcttggcgac tttttggggg gagggggcgg ggagtttgtc gctgcctagg cggtggaggt
721 ggctgggggt gccttctgat cttcctcctc ctccccctcc ccccgaacct cttctcccct
781 cacttgctgg gaccccagac gctcacagcc ccgcgtcaat gggcagggag agggtccttg
841 cggctgttgt cagcgagggc agaatcaaaa gtggcatttt agtgcctttc cggggctttt
901 ctcgcgaccc cctgcccccc accctcgctg tcccccgcta gatgccctcg ttgggggtgc
961 gaggctgtgg ggaaaagttt aaggtttgtt aatattagtc gcgattgttg gcgagggggg
1021 tgggggtgat tggaagggag gcgaggtggc cttcccaatg cgcgttattc ggggttattg
1081 aagaataata ttgcaagtga cagccagaag tagactttct gtcctcacac cgaagaaccc
1141 gagtgagcag gagggaggga gagacgcgaa gagacctttt ttcctttttg gagaccttgt
1201 ccgcagtgat tttttttttt ttaagagaat cctcagtcac cacgtcgttt ccccagcacc
1261 atcacagtgt acagctcata acgggttttg ctttgttttt acgatttccc cccaacggat
1321 cacttgtcag atcaatttta tcttcttcct cctccctgct tcccactctc ccctcctccc
1381 catcgcaaac cccgttctct gaggttagac attttacaaa cccctatatg ttggttttcg
1441 aattgtgatt ttttttttaa acccctttct catggctact cttctagacg tttatttctg
1501 cccttccccc gcttaggggg gcgggggtag gggaaaggaa aataatacaa tttcagggga
1561 agtcgccttc aggtctgctg cttttttatt tttttttttt aattaaaaaa aaaaaggaca
1621 tagaaaacat cagtcttgaa cttctcttca agaacccggg ctgcaaagga aatctccttt
1681 gtttttgtta tttatgtgct gtcaagtttt gaagtggtga tctttagaca gtgactgagt
1741 atggatcatt tgaacgaggc aactcagggg aaagaacatt cagaaatgtc taacaatgtg
1801 agtgatccga agggtccacc agccaagatt gcccgcctgg agcagaacgg gagcccgcta
1861 ggaagaggaa ggcttgggag tacaggtgca aaaatgcagg gagtgccttt aaaacactcg
1921 ggccatctga tgaaaaccaa ccttaggaaa ggaaccatgc tgccagtttt ctgtgtggtg
1981 gaacattatg aaaacgccat tgaatatgat tgcaaggagg agcatgcaga atttgtgctg
2041 gtgagaaagg atatgctttt caaccagctg atcgaaatgg cattgctgtc tctaggttat
2101 tcacatagct ctgctgccca ggccaaaggg ctaatccagg ttggaaagtg gaatccagtt
2161 ccactgtctt acgtgacaga tgcccctgat gctacagtag cagatatgct tcaagatgtg
2221 tatcatgtgg tcacattgaa aattcagtta cacagttgcc ccaaactaga agacttgcct
2281 cccgaacaat ggtcgcacac cacagtgagg aatgctctga aggacttact gaaagatatg
2341 aatcagagtt cattggccaa ggagtgcccc ctttcacaga gtatgatttc ttccattgtg
2401 aacagtactt actatgcaaa tgtctcagca gcaaaatgtc aagaatttgg aaggtggtac
2461 aaacatttca agaagacaaa agatatgatg gttgaaatgg atagtctttc tgagctatcc
2521 cagcaaggcg ccaatcatgt caattttggc cagcaaccag ttccagggaa cacagccgag
2581 cagcctccat cccctgcgca gctctcccat ggcagccagc cctctgtccg gacacctctt
2641 ccaaacctgc accctgggct cgtatcaaca cctatcagtc ctcaattggt caaccagcag
2701 ctggtgatgg ctcagctgct gaaccagcag tatgcagtga atagactttt agcccagcag
2761 tccttaaacc aacaatactt gaaccaccct ccccctgtca gtagatctat gaataagcct
2821 ttggagcaac aggtttcgac caacacagag gtgtcttccg aaatctacca gtgggtacgc
2881 gatgaactga aacgagcagg aatctcccag gcggtatttg cacgtgtggc ttttaacaga
2941 actcagggct tgctttcaga aatcctccga aaggaagagg accccaagac tgcatcccag
3001 tctttgctgg taaaccttcg ggctatgcag aatttcttgc agttaccgga agctgaaaga
3061 gaccgaatat accaggacga aagggaaagg agcttgaatg ctgcctcggc catgggtcct
3121 gccccactca tcagcacacc acccagccgt cctccccagg tgaaaacagc tactattgcc
3181 actgaaagga atgggaaacc agagaacaat accatgaaca ttaatgcttc catttatgat
3241 gagattcagc aggaaatgaa gcgtgctaaa gtgtctcaag cactgtttgc aaaggttgca
3301 gcaaccaaaa gccagggatg gttgtgcgag ctgttacgct ggaaagaaga tccttctcca
3361 gaaaacagaa ccctgtggga gaacctctcc atgatccgaa ggttcctcag tcttcctcag
3421 ccagaacgtg atgccattta tgaacaggag agcaacgcgg tgcatcacca tggcgacagg
3481 ccgccccaca ttatccatgt tccagcagag cagattcagc aacagcagca gcaacagcaa
3541 cagcagcagc agcagcagca ggcaccgccg cctccacagc cacagcagca gccacagaca
3601 ggccctcggc tccccccacg gcaacccacg gtggcctctc cagcagagtc agatgaggaa
3661 aaccgacaga agacccggcc acgaacaaaa atttcagtgg aagccttggg aatcctccag
3721 agtttcatac aagacgtggg cctgtaccct gacgaagagg ccatccagac tctgtctgcc
3781 cagctcgacc ttcccaagta caccatcatc aagttctttc agaaccagcg gtactatctc
3841 aagcaccacg gcaaactgaa ggacaattcc ggtttagagg tcgatgtggc agaatataaa
3901 gaagaggagc tgctgaagga tttggaagag agtgtccaag ataaaaatac taacaccctt
3961 ttttcagtga aactagaaga agagctgtca gtggaaggaa acacagacat taatactgat
4021 ttgaaagact gagataaaag tatttgtttc gttcaacagt gccactggta tttactaaca
4081 aaatgaaaag tccaccttgt cttctctcag aaaacctttg ttgttcattg tttggccaat
4141 gaatcttcaa aaacttgcac aaacagaaaa gttggaaaag gataatacag actgcactaa
4201 atgttttcct ctgttttaca aactgcttgg cagccccagg tgaagcatca aggattgttt
4261 ggtattaaaa tttgtgttca cgggatgcac caaagtgtgt accccgtaag catgaaacca
4321 gtgttttttg tttttttttt agttcttatt ccggagcctc aaacaagcat tataccttct
4381 gtgattatga tttcctctcc tataattatt tctgtagcac tccacactga tctttggaaa
4441 cttgcccctt atttaaaaaa aaaaaagaaa aaaaagagtt tgttactcta ttgtatgtta
4501 caaaagaact atagactgtg gaatgcagtt taaagatgac atatgccaac aaatgccttg
4561 tattatatgg cactgccgta attcaaattt gtttttattt tggaaataaa agttcactgt
4621 actttttttt cattctcatt gttacatgat tttttaaaaa aaggaaaaga aaatgtgaaa
4681 cacaatttag tcctcattat ttatttgtag atcctgcagc atcatgttgt aattaatttt
4741 ttggaagttt ccgttaaatg taatattgct tctcttgtta ccatactgat tcttttctat
4801 ttataaatgt attttgatgg gcagtaaaac aaagtgtctt aaaagtttta aatagagaaa
4861 atgtgcttta cacagttgcc tataaaaagt gctctatgtt atccaagcaa ttcatactat
4921 aagcttcact cttattgttg tatgcaattt ttactatcat gcaaataagc ttaggtaaat
4981 aaaactaata gatcacctta gaaaattatg caattaatgt gaaaataatt gatgtttgca
5041 atgtgtcttc ctttggttta caatcaattt taaagctaca tctgtataaa atttctgtat
5101 aaaggtgtat ttctttttta tgagtttatg gctatgaaaa cagctatttt gttacagctg
5161 gctgttttta taagtgtatc acaattttct ttatgcagaa atgttctgac taggagtggt
5221 tattgactgt aactacacaa ttaaaattgt ttgtatcgt
//