LOCUS AK126959 4592 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ45012 fis, clone BRAWH3013264, highly similar
to Homo sapiens SNF2 histone linker PHD RING helicase (SHPRH),
mRNA.
ACCESSION AK126959
VERSION AK126959.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4592)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Kawakami,B., Sugiyama,A., Takemoto,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..4592
/clone="BRAWH3013264"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000046832"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 68..2716
/codon_start=1
/note="highly similar to Homo sapiens SNF2 histone linker
PHD RING helicase (SHPRH), mRNA"
/protein_id="BAG54410.1"
/translation="MAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWC
ISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQHLYSFIAKILWRS
AKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDVVVKLRKISDWALKLSS
LDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEA
HRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLME
LLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKI
HSNSPWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLL
TTQMEELNKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFT
EYESKLFSNTVKGQTAIFEEMIGDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAK
SHRFDVEFVDEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDP
REPKPNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSG
GVNPEPCPICARQLGKQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTS
HKEISYVFTSEKANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVL
DIISKALTDNNMEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHV
LLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNSS
AKHSEASVLTVADLADLFTKETEELE"
BASE COUNT 1409 a 864 c 920 g 1399 t
ORIGIN
1 aaattatgtc gatatcccac atagcaatag tgaggatggg cgtcgcctac ggaaccagaa
61 gcgctatatg gctatcccga gccccctggt agctgtggag tggtggagga tctgccttga
121 tgaagctcag atggttgagt gtcccacagt aaaagctgca gaaatggccc agcgtttgag
181 tgggattaat cgatggtgta tcagtggcac tccagtacag agaggattag aggatctttt
241 tgggttagtg gtctttcttg gtattgaacc ttactgtgtc aaacactggt gggttcgact
301 tctctatcgg ccttactgca agaagaatcc tcagcatctc tacagcttta ttgccaagat
361 actgtggagg tctgcaaaga aagatgtgat tgaccaaatc caaataccac cacaaaccga
421 agaaatacac tggctccact tttctccagt ggaaaggcat ttctatcacc gtcagcatga
481 ggtgtgctgc caggatgtgg tggtaaaact caggaagatt tctgactggg ctctgaagct
541 cagcagccta gacagaagga ctgtcacctc tatcctgtat ccattgctga ggctcagaca
601 ggcctgctgt cacccacagg ctgttcgtgg agagttcttg ccactccaaa aaagcaccat
661 gacaatggaa gagctgctga catctttgca gaagaaatgt ggaactgaat gtgaagaagc
721 acatcgacag ctagtttgtg ctctcaatgg cttagcaggc attcatatta ttaaaggtga
781 gtatgccttg gcagcagaat tgtacagaga agtgttgcgc tcctcggagg aacacaaagg
841 aaaactcaaa actgattcac ttcaaagact tcatgctacc cataacttga tggaattgtt
901 gatagccagg cacccaggga taccacctac cttgcgtgat ggccgacttg aggaagaggc
961 caaacagctg cgagagcact acatgagcaa gtgtaataca gaagttgctg aagcccagca
1021 agctttatat cctgtgcagc agaccatcca tgagcttcaa agaaagattc attctaattc
1081 tccttggtgg ctaaatgtga tccacagagc aatagaattt actattgatg aggagctagt
1141 tcagcgagtg cgaaatgaaa taaccagcaa ctacaagcaa caaactggca agctttctat
1201 gtcagagaag ttccgtgatt gcagaggtct tcagttctta cttacaacac aaatggaaga
1261 gctaaataaa tgccagaagc tagtaagaga ggctgtaaaa aacctggagg gacctccatc
1321 tcgtaatgtt attgagtctg caacagtctg tcacctccga ccagccagac ttcctctcaa
1381 ctgctgtgtc ttttgtaaag ctgatgaatt gttcacagag tatgaatcaa agctattttc
1441 caacacagtc aaaggccaga ctgcaatatt tgaggagatg ataggagatg aagaaggact
1501 ggtggatgat cgagcaccta ccaccacccg gggtctctgg gcaataagtg agacagagcg
1561 atctatgaaa gcaatactat catttgcaaa atcacatagg tttgatgttg aatttgttga
1621 tgaaggaagc acttcaatgg atctctttga agcatggaag aaggaatata agttgcttca
1681 tgaatattgg atggctctga ggaatcgtgt gtctgctgtt gatgaacttg caatggctac
1741 agaacgacta agagtgcgtg atcctaggga gccaaagcct aatccgcctg ttcttcatat
1801 cattgaacca catgaggtag aacaaaaccg aataaaacta ctaaatgata aagctgttgc
1861 tacatcacag cttcagaaaa aacttgggca gcttctttac ctaactaatt tggagaagtc
1921 tcaagataaa acatcgggag gtgttaatcc agaaccttgt ccaatctgtg ctcgacagct
1981 aggaaaacag tgggcggtac tgacctgtgg tcactgtttc tgtaatgaat gcatttctat
2041 aattattgaa caatacagcg tgggatctca cagaagctcc attaagtgtg caatctgccg
2101 ccagaccaca tctcacaaag aaatctcgta tgtctttacc tcagagaaag caaaccagga
2161 ggaggacatc cctgtgaagg gcagccattc tacaaaagtg gaagctgtgg tcagaactct
2221 gatgaaaata cagcttagag atccaggggc caaagcactc gttttctcaa cgtggcaaga
2281 tgtattagat attatttcaa aagctcttac tgacaacaac atggaatttg cacaaatcag
2341 tcgtgttaag acatttcagg agaacctttc agcatttaaa cgtgatcccc aaatcaatat
2401 tttgctgctg cccctgcaca caggttctaa tggattaact atcattgaag caactcatgt
2461 tctcttggtg gagcccatat tgaaccctgc ccatgagctt caggccatag ggagggtgca
2521 ccgaattgga cagacaaaac ctactattgt acacagattc ttaattaaag caacaataga
2581 agaaagaatg caggcaatgc tgaaaactgc tgagagaagt cacacgaact catcagcaaa
2641 gcattcagag gcctctgtct tgactgtggc tgacctggca gacctattta ccaaagaaac
2701 tgaagagctt gaatgaacta cacttgattc attccatgga ctttagtgta ttaataaact
2761 ttcatagctg tagagcaaag ttacaagttt taaaaaccca gtagataaca gtaacactgt
2821 tcctagttga atgaatttgt ttattgttct ggttatacag tggcttagta cttattgagt
2881 ccttttcaat atactgtttc caaaagatct ataaagattc ttaattttac actcctaata
2941 aaacatttat tttttgtccc aaatagtatc tatatctgat gatgcaaggg aattaagaga
3001 ggtaatgtgt acttttctta tgataagatc actcataaaa cagttggaat aagaaagtaa
3061 actagtctag ttttatatga cctggtatat tgaacaaaca tagatctcag ttttggaagg
3121 gccttcagta tctttagcac atgattcacc aatatcttgt tagtaatatt ttaagtagat
3181 ggtgaattat attaacccat tttttgagta ggcttatacc ataactttac acctagtaat
3241 tttgcagtaa tacaactcct tacaataagt taatgttaga cagttatttg tttcttctgc
3301 atcttgctac tgaaaacaaa aacaatgaaa atattcatat ttctattatg tgtaaagtgg
3361 tgttagtgta aacagttaac tccaaataga ttttttaatg tattaatgat taccttaaaa
3421 ttatctgctt tccctactct taatttttct tattgttaaa gtttttatat gttgtaagat
3481 tgatgtatct gtaaatattg cagtttttat gattttgttt tattataaca tggaaatatg
3541 gcagggtttt tttttttaat cattattata ctgatgtctt ggattctttt tctttcccat
3601 gttcttgtgt aactagactt tttagccagt gatatctgaa ttcatggtag agttgttatt
3661 tcactccagt tgttcctccc ttaagcacga gtctttgacc ttttgaacaa gagaatgcca
3721 tgttcacata agcaaatcgt tgcaagtgat aataacgaag tgtttcttcc tctgtgagga
3781 attaatggac tttgaaattg ctgaataagg agtagcttgt tacatcctag ccatttgatg
3841 taatacaaat gttcttattt ggcttccttt tctttgagcc ttcagagttt taaaggaccc
3901 tctttgaccc tcaggactta ttagctccca gttagctgcc tggaaaactc atagaaccat
3961 tccctagatc ccatttgtcc gagaggcttt ggtgcttagt taaggtgcat tttcttactc
4021 taggtttata gagtgatgta attcaactga agaaaacaca cacatgcttt tggtgcttat
4081 tcttcagtta aaaggaggta tccattgatt cttttatatg aaattaaatc aaactgttat
4141 ttttatagct cttcacatat taaaaagagc tttcatgtac atttacgtgt ttaatttacc
4201 caacaatctt gtgaagttga tataattaat atctttactg ttttaaaggt agagaactga
4261 agttcagata tattgaaact ttcttaggac atgtagcaag taaacagtgg agcccaggtc
4321 ccctgactcc atatcttaca ttcttttact aataacatgt catgctgaga ttcagaaggc
4381 ccatgcttat aatttaaaaa tgagactatt tcagtatttc tttgtgtttg ttttctacta
4441 ttcctttctg agctatgttt tagagaaaac aatttgatat gcttcaattt tgtaaaatca
4501 aattacatat atataaaaaa acctatctgt attagacaaa aactgttttt atttatttct
4561 gtaagatatc cattaaataa atattttagt gg
//