LOCUS AK126923 3471 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ44975 fis, clone BRAWH3001783, highly similar
to Protocadherin-15 precursor.
ACCESSION AK126923
VERSION AK126923.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3471)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Kawakami,B., Sugiyama,A., Takemoto,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..3471
/clone="BRAWH3001783"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000046796"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 363..2540
/codon_start=1
/note="highly similar to Protocadherin-15 precursor"
/protein_id="BAG54399.1"
/translation="MFRQFYLWTCLASGIILGSLFEICLGQYDDGTILVDNMLIKGTA
GGPDPTIELSLKDNVDYWVLMDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCINKK
VGTIIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDG
PNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNIVLRKRLNYEDKTRYFVIIQANDRAQN
LNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPI
IVTPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRD
FHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATI
SDSLNLTSPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDRE
EQQTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQ
LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADN
APPAERRNSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRVGAVLLNLQATDREGD
SITYAIENGDPQRVFNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVN
IVVTDVNDNAPVFDPYLPRNLSVVEEEANAFVGQVKAINNDSV"
BASE COUNT 1083 a 724 c 728 g 936 t
ORIGIN
1 gctatcagga ggagcaaaag ggaaggatct gctgctgggg gctcgctggg tgaccctttg
61 ccagacgaaa agagctggtc gagagagaag cgcttggcag gagctctctg cgggacctaa
121 gctccgtggc tgctcgggat ccctacgtcc gctgctgctg aaggagcaga ggggaggacg
181 ccagcggttg cttactggag cctggaggaa aatggaaaca tcattcccta gaaacagttg
241 aagttgacag acctagaggt tgacaaaagg acacgacact agggaatttg cattgtcatg
301 tttcgaaata ccattccaaa gacctgcaaa taagatcagc tttgagtgaa ctttgacaga
361 agatgtttcg acagttttat ctctggacat gtttagcttc agggatcatc ctgggctctc
421 tctttgaaat ctgcttgggc cagtatgatg atggtacaat tctggtggac aacatgctga
481 tcaaagggac tgctggagga ccagacccca ccatagaact ttctttaaag gataatgtgg
541 attactgggt gttgatggat cctgttaagc aaatgctttt cctgaacagc accggaagag
601 ttctggatag agatccaccg atgaacatac actccattgt ggtgcaggtc cagtgcatca
661 acaaaaaagt gggcactatt atctaccatg aagtgcgaat agtggtgaga gacaggaatg
721 acaactcacc cactttcaag catgaaagct actatgccac agtgaatgag ctcactccag
781 ttggtaccac aatattcaca ggattttcag gagacaatgg agctacagat atagatgatg
841 gaccaaatgg acagatagag tatgttattc agtataatcc agatgatccg acatccaatg
901 acacctttga aattccccta atgttgactg gaaatatagt gttaaggaag aggctcaact
961 atgaagataa gactcgctac tttgtcataa tccaagctaa tgaccgtgcc caaaatctga
1021 atgagaggcg aaccaccacc accactctca cagtggatgt tctggatgga gatgacttgg
1081 gtccaatgtt tcttccttgt gtccttgtgc caaacactcg tgattgccgt ccactcactt
1141 atcaagctgc catacctgag ttgagaactc cggaagaact gaaccccatt attgttacgc
1201 caccaatcca agccattgat caggaccgga atattcaacc gccatcagat aggccaggaa
1261 tcctctattc catccttgtt gggactcctg aggattaccc acgatttttc catatgcatc
1321 ctaggacagc agaacttagt ctcctggagc cagtaaacag agactttcac cagaaatttg
1381 atttggttat taaggctgaa caagacaatg gtcatcctct tcctgccttt gccggtctac
1441 acattgaaat actggatgaa aacaatcaaa gtccatattt tacaatgccc agttatcaag
1501 gctatatcct ggaatctgcc ccagtgggag caaccatttc ggacagtctc aatttgactt
1561 cacctttaag aatagtagct ctggacaagg acatagaaga tacaaaagac ccagagcttc
1621 acctttttct gaatgactac acctcagtct tcaccgtcac acagactggt attactcgct
1681 acctcacctt acttcaacca gtggacaggg aagaacagca aacttacacc ttttcgataa
1741 cagcatttga tggtgtacaa gaaagtgagc cagtcatcgt caatattcaa gtgatggatg
1801 caaatgataa cacgccaacc ttccctgaaa tatcctatga tgtgtatgtt tatacagaca
1861 tgagacctgg ggacagtgtc atacagctca ctgcagtcga cgcagacgaa gggtcaaatg
1921 gggagatcac atatgaaatc cttgttgggg ctcagggaga cttcatcatc aataaaacaa
1981 cagggcttat caccatcgct ccaggggtgg aaatgatagt cgggcggact tacgcactca
2041 cggtccaagc agcggataat gctcctcctg cagagcgaag gaactccatc tgcactgtgt
2101 atattgaagt gcttccacca aataatcaaa gccctcctcg cttcccacag ctgatgtata
2161 gccttgaaat tagtgaagcc atgagggttg gtgctgtttt attaaatcta caggcaactg
2221 atcgagaggg agactcaata acatatgcca ttgagaatgg agatcctcag agagttttta
2281 atctttcaga aaccacgggg attctaacct tagggaaagc actggacagg gaaagcactg
2341 atcgctacat tctgatcatc acagcttcag atggcaggcc agatgggacc tcaactgcca
2401 cagtaaacat agtggtgaca gatgtcaatg acaatgctcc agtgtttgat ccttatctgc
2461 caagaaattt atctgtggtg gaagaagaag ccaatgcctt tgtgggtcaa gtaaaagcta
2521 tcaacaacga cagtgtgtaa aacagaccct cagagagaac caaaaggcat cctcagacac
2581 gttaaaaact tagcagaact tgaaaaatca gtagctaaca tgtacagtca aatagaaaaa
2641 aactatctac gcacaaatgt ttcagaactt caaactatgt gcccttcaga agtaacaaat
2701 atggaaatca catctgaaca aaacaagggg agtttgaaca atattgtcga gggaactgaa
2761 aaacaatctc acagtcaatc tacttcactg taatgttgct tttcttattt tagtcgggca
2821 aacctcttgt tgatcatagt cttcaagttg aacatcaaat ttgaacgtca aagaagactc
2881 tattatttta ccccaaattc aatgaaatgc agtttttttt ctcgttttta atttaaaaag
2941 atattaacct catcactact aactcactca tataatagat taccttactt tttaaaaact
3001 acaaagtagc ataatttgtt ctacatttat ttgaaaagta agtaatttta atctcttttt
3061 tagtgggaat atttgggcat gaaaattaga tacccaactt aaaccaaagg catgtctatc
3121 atgtggatgc agtaacattt acatttagtt tttgatcgta gttttatatg aatgttccaa
3181 gaaaaaagca gactgttaca aataagttaa aactgatatg attgataggt tctgtttttt
3241 cttgaagcct atgtatttgg taagaagaaa tactaccgaa gtaaaatata atgtacctag
3301 attgtaggag atgacagaca taaggtattt caaaataaat ctcaggtgct ataacatgta
3361 gtcatctgtt ttctgataag aacatctttt actctgactt gcttttatct tagtagtatg
3421 cttatggatt tagtagtatg cttatggatt tgataaatct tacacttttt c
//