LOCUS AK126013 2981 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ44025 fis, clone TESTI4026700, highly similar
to Rab effector MyRIP.
ACCESSION AK126013
VERSION AK126013.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2981)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..2981
/clone="TESTI4026700"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000045886"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 242..2626
/codon_start=1
/note="highly similar to Rab effector MyRIP"
/protein_id="BAG54276.1"
/translation="MGRKLDLSGLTDDETEHVLQVVQRDFNLRKKEEERLSELKQKLD
EEGSKCSILSKHQQFVEHCCMRCCSPFTFLVNTKRQCGDCKFNVCKSCCSYQKHEKAW
VCCVCQQARLLRAQSLEWFYNNVKSRFKRFGSAKVLKNLYRKHRLESGACFDILGGSL
FESNLENEGSISGSDSTFYRQSEGHSVMDTLAVALRVAEEAIEEAISKAEAYGDSLDK
QNEASYLRDHKEELTEELATTILQKIIRKQKSKSEQQVEEEPGWPHPQSCSTKVADEG
TSASPGGYRAPAALWRSQSAFSITGEEALKTPPVEAPSRQPRDQGQHPRAESALPSWK
SVDRLDETNLAPVLQSPDGNWVALKDGAPPPTRLLAKPKSGTFQALEVASSVASAYDE
MGSDSEEDFDWSEALSKLCPRSRALPRNPQPQPTQAQSSDQGPIAASPSSALSPNPEA
MCSDSETSSAGSSREVGHQARLSWLQRKAPRNPAAEKMRLHGELDVNFNPQLASRETS
DSSEPEEAPHTTDRRARRWRGARLGSEGPSKEPSSPSAQLRDLDTHQVSDDLSETDIS
NEARDPQTLTDTTEEKRRNRLYELAMKMSEKETSSGEDQESEPKTESENQKESLSSED
NSQSVQEELKKVYLAAGTVYGLETQLTELEDAARCIHSGTDETHLADLEDQVATAAAQ
VHHAELQISDIESRISALTIAGLNIAPCVRFTRRRDQKQRTQVQTIDTSRQQRRKLPA
PPVKAEKIETSSVTTIKTFNHNFILQGSSTNRTKERKGTTKDLMEPALESAVMY"
BASE COUNT 767 a 833 c 833 g 548 t
ORIGIN
1 ctgcggctgc ggttctggca gccgagcccc cgcggtgctg cagcccagct ttagcgcgca
61 gaccgacccg cgccccttct tcgccgccgg cagcctctaa tccacgcggc gcgttgcggc
121 aggtgccctg ggcgtactga ggcgcggtgg cctgagcccg gccgccatcg atgaccccgg
181 tcgcggactt gcttcaggct ggccaccccc cgtcttgttt catcatctgt gttgagtaac
241 catggggagg aagctggacc tgtctggttt gactgatgat gaaacagagc atgttcttca
301 ggtggttcaa agagacttca atcttcgcaa aaaagaagaa gaacgactaa gtgagctgaa
361 gcagaagctg gatgaggaag gcagcaagtg cagcatcctc tcgaagcacc agcagtttgt
421 ggagcactgc tgcatgcgct gctgctcgcc cttcaccttc ctcgtcaaca ccaagcgcca
481 gtgtggagat tgcaaattca atgtctgcaa gagctgctgc tcctaccaga agcacgaaaa
541 ggcctgggtc tgctgcgtct gccagcaagc gaggcttctg agggcccaat ctctggaatg
601 gttctacaat aatgtgaaga gccgcttcaa gcgctttggc agtgccaagg ttctgaagaa
661 cctgtacagg aagcaccggc tggagagtgg cgcgtgcttc gacattctag gaggaagcct
721 ttttgagtca aacctggaga atgaaggaag catttctggc agtgattcaa cattttatag
781 gcagtcagaa ggacatagtg tgatggacac cttggctgtg gccctacggg tggctgaaga
841 ggccattgag gaagcaattt ccaaagcaga ggcatatggg gacagcctgg acaagcaaaa
901 tgaggccagt tacctgcggg accacaagga ggagctaact gaggaactgg ccacgacaat
961 cctgcagaag attatacgaa aacagaagag caaaagtgag cagcaagtgg aagaagagcc
1021 aggatggcca catccccaga gttgcagcac aaaggtggca gatgagggga cctcagcatc
1081 ccctggaggc taccgtgctc ccgctgccct ctggaggtcc cagtctgcct tctcaatcac
1141 tggagaagaa gccctgaaga cccctccagt ggaggctcca tcgaggcagc caagggacca
1201 aggccaacac ccgagagcag agtctgctct gcccagctgg aagagtgtgg acaggctgga
1261 tgaaacaaac ctggccccag ttttgcagag ccccgacggg aactgggtgg ccctgaagga
1321 tggcgctcca ccccccaccc gactactggc caaacctaag agcgggacgt ttcaggccct
1381 ggaggtggcc tccagtgtgg catctgccta cgatgagatg ggctccgata gcgaggaaga
1441 ctttgactgg agtgaggcct tgagcaagct gtgtcccagg tcccgggccc tgcccaggaa
1501 cccccagcct cagcccacac aggcccagag ctctgaccaa ggccccatag ctgcctcccc
1561 atcctctgca ctctccccca accctgaggc catgtgctct gactcggaga cctcctccgc
1621 aggctcttcc cgagaagttg ggcaccaggc cagactgtcc tggttgcaga ggaaggcccc
1681 caggaaccct gcagctgaga agatgcgctt gcatggagag ctggacgtga acttcaaccc
1741 ccagttggcc agcagggaga cctcggacag cagcgagccg gaggaggccc cccacaccac
1801 agaccggcgg gccaggaggt ggagaggagc ccgattgggc tcagaagggc caagcaaaga
1861 accatcttcc cccagcgccc agctccggga tctagacaca catcaggtgt cggatgattt
1921 atcagagaca gacatcagca atgaggctcg ggacccccag actctcacag acaccacaga
1981 ggagaaacgg agaaacaggc tgtacgagtt agcaatgaaa atgagtgaaa aggagacttc
2041 ttcaggggag gatcaggagt ctgagcccaa gacagaatct gagaaccaga aggaaagtct
2101 gtcctctgaa gacaacagcc agagtgtcca ggaagagctg aagaaggtat acctggcagc
2161 aggcactgtg tatggactgg agacccagct gactgagcta gaagatgccg cccgctgcat
2221 ccacagtggc actgatgaga cccatctggc ggatctggag gaccaggtgg ccacggctgc
2281 agcccaagtc caccatgctg aactccagat ttcagatatt gagagccgga tttcagccct
2341 gaccattgca ggattaaaca tagcaccatg tgtgcgcttc acaagaagac gggatcagaa
2401 gcaaaggacc caggtacaaa ccatagatac atcaaggcag caaaggagga aactgcctgc
2461 tccaccggtg aaagccgaaa aaattgagac atcttcagtg actaccatta aaacatttaa
2521 ccacaacttc attctccaag gctcctcaac aaacaggact aaggaaagga aaggcaccac
2581 caaggatttg atggagcctg ctctggagtc agctgtgatg tactgacacc atggaattcc
2641 actgccagtg acccactgcc tccggccgta cacgacagtg ccttgaccca acagccatcg
2701 agtactgtat gtatttccac ctgaggagaa ggcctgggga ggccacagtg caccattgca
2761 cagggctgtc ctgatacctc atccagaaag ccgtctcaga cttcagcact gcggtcttgc
2821 ccactctctg ccttaggctc ccaggggaat ccaagacaga aaatgaagac actggcttcc
2881 aacagcagcg ctccatgttt aagatacata ttttccctgt ttgctttgct actgtatgtt
2941 gactttaaga tcttttttta aatacatttg attcagctag t
//