LOCUS AK125918 3461 bp mRNA linear HUM 12-JUL-2008
DEFINITION Homo sapiens cDNA FLJ43930 fis, clone TESTI4013441, highly similar
to 1,4-alpha-glucan branching enzyme (EC 2.4.1.18).
ACCESSION AK125918
VERSION AK125918.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3461)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..3461
/clone="TESTI4013441"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000045791"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 647..2755
/codon_start=1
/note="highly similar to 1,4-alpha-glucan branching
enzyme (EC 2.4.1.18)"
/protein_id="BAG54265.1"
/translation="MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVD
FQRRYKQFSQILKNIGENEGGIDKFFRGYESFGVHRCADGGLYCKEWAPGAEGVFLTG
DFNGWNPFSYPYKKLDYGKWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPW
AKYVVREGDNVNYDWIHWDPEHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKH
FTCNVLPRIKGLGYNCIQLMAIMEHAYYASFGYQITSFSAASSRYGTPEELQELVDTA
HSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEV
LRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEYFGLQVDEDALTY
LMLANHLVHTLCPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEF
KDEDWNMGDIVYTLTNRRYLEKCIAYAESHDQALVGDKSLAFWLMDAEMYTNMSVLTP
FTPVIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHPEWLDFPRKGNNESYHYARRQ
FHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAPQAYVSEKHEGNKIIAFERAGLLFI
FNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGHQRLDHSTDFFSEAFEHNGRPYS
LLVYIPSRVALILQNVDLPN"
BASE COUNT 945 a 712 c 805 g 999 t
ORIGIN
1 aaaacttagg agagtcctgg ttgtaagagg tattaacatt ttcagcagta gtactctagc
61 tacacttgac tgttcccctc tctgtgaatt tacatgatat gtttgaaata ctgcccctca
121 aaagtctcag aactttgaga aatacggtcc tttccaaaaa aaccccttat gtccaatttg
181 aaggggtcgc tgtcagtggg tgcttaagtg ggtaaagaaa agccaagaat atgtcagggt
241 gaggaaggcc aaggctgagc gaggtcagct tgggacccac ctcctagaat gacttccgcc
301 agcaggaaaa aaccgttaag gggaggaaag ggcaggtccc tgcggcctcc aggtgccagc
361 cgcgtgagtg ggcggagagg cctcggtgcc tcctacccgc tccggacgtg cgtcccggca
421 tcaccccggg atccgctcct ccccgctggc ggggggagaa agggcaggag gccttccgtc
481 ccggctataa agggccccgg accgccgcgg ctcgcctcgg cttgcctcga cacgcctagg
541 cgccctccgg ctccgcccta gccgccgcgt cccagctaga gctccagcgc ccgctcaggc
601 cccactcgac cctctcgggc ctcggctact tggactgcgg cggaatatgg cggctccgat
661 gactcccgcg gctcggcccg aggactacga ggcggcgctc aatgccgccc tggctgacgt
721 gcccgaactg gccagactcc tggagatcga cccgtacttg aagccctacg ccgtggactt
781 ccagcgcagg tataagcagt ttagccaaat tttgaagaac attggagaaa atgaaggtgg
841 tattgataag tttttcagag gctatgaatc atttggcgtc cacagatgtg ctgatggtgg
901 tttatactgc aaagaatggg ccccgggagc agaaggagtt tttcttactg gagattttaa
961 tggttggaat ccattttcgt acccatacaa aaaactggat tatggaaaat gggagctgta
1021 tatcccacca aagcagaata aatctgtact cgtgcctcat ggatccaaat taaaggtagt
1081 tattactagt aaaagcggag agatcttgta tcgtatttca ccgtgggcaa agtatgtggt
1141 tcgtgaaggt gataatgtga attatgattg gatacactgg gatccagaac actcatatga
1201 gtttaagcat tccagaccaa agaagccacg gagtctaaga atttatgaat ctcatgtggg
1261 aatttcttcc catgaaggaa aagtagcttc ttataaacat tttacatgca atgtactacc
1321 aagaatcaaa ggccttggat acaactgcat tcagttgatg gcaatcatgg agcatgctta
1381 ctatgccagc tttggttacc aaatcacaag cttctctgca gcttccagcc gttatggaac
1441 acctgaagag ctacaagaac tggtagacac agctcattcc atgggtatca tagtcctctt
1501 agatgtggta cacagccatg cttcaaaaaa ttcagcagat ggattgaata tgtttgatgg
1561 gacagattcc tgttattttc attctggacc tagagggact catgatcttt gggatagcag
1621 attgtttgcc tactccagct gggaagtttt aagattcctt ctgtcaaaca taagatggtg
1681 gttggaagaa tatcgctttg atggatttcg ttttgatggt gttacgtcca tgctttatca
1741 tcaccatgga gtgggtcaag gtttctcagg tgattacagt gaatatttcg gactacaagt
1801 agatgaagat gccttgactt acctcatgtt ggcaaatcat ttggttcaca cgctgtgtcc
1861 cgattctata acaatagctg aggatgtatc aggaatgcca gctctgtgct ctccaatttc
1921 ccagggaggg ggtggttttg actatcgact agccatggca attccagata agtggattca
1981 gctacttaaa gagtttaaag atgaagactg gaacatgggc gatatagtat acacgctcac
2041 aaacaggcgc taccttgaaa agtgcattgc ttatgcagag agccatgatc aggcattggt
2101 tggggataag tcgctggcat tttggttgat ggatgccgaa atgtatacaa acatgagtgt
2161 cctgactcct tttactccag ttattgatcg tggaatacag cttcataaaa tgattcgact
2221 cattacgcat gggcttggtg gagaaggcta tctcaatttc atgggtaatg aatttgggca
2281 tcctgaatgg ttagacttcc caagaaaagg aaataatgag agttaccatt atgccaggcg
2341 gcagtttcat ttaactgacg acgaccttct tcgctacaag ttcctaaata attttgacag
2401 ggatatgaat agattggaag aaagatatgg ttggcttgca gctccacagg cctacgtgag
2461 tgaaaaacat gaaggcaata agatcattgc ttttgaaaga gcaggtcttc ttttcatttt
2521 caacttccat ccaagcaaga gctacactga ctaccgagtt ggaacagcat tgccagggaa
2581 attcaaaatt gtgctagatt cagatgcagc ggaatatgga gggcatcaga gactggacca
2641 cagcactgac tttttttctg aggcttttga acataatggg cgtccctatt ctcttttggt
2701 gtacattcca agcagagtgg ccctcatcct tcagaatgtg gatctgccga attgaagagg
2761 cctgatttca gctccaccag atgcagattt gtgttttgtt ttcttgttat cactgtcaca
2821 cagcttataa catgtatgct tttcagaata cagttgtcta gccaagccat caagtgtctg
2881 aaattcaata ttggtttatg caaatacagc aaacttttat ttaagtagat aggagaatat
2941 gtttaaaata ttaggaatcc tagaccatat tttcaagtca tcttagcagc taggattctc
3001 aaatggaagt gttatatata atatgttaaa aacattttgc tttcctggct aattatttga
3061 tccttttaaa ttcaaatttg aatcatttgt catgtatgat tatttctgtt aaatgtacac
3121 agtatttaag atggatattt ggtggctcta tttgttctga tatcttttgg tctaaattat
3181 gaggtaccaa gattgtttct ttgtttcttt ttttcaaatt gtgtttagaa atactgtaat
3241 aaatatgcag tagtgatata aagaattata tccaaggtaa tataaaagcc attacgtatg
3301 aactcatccg tgtctcattt tgtgttttat tttgtgatct cttgtccact aagtatcttg
3361 ttaaatgcca gtatctcagt ctttctgaag ccctgaaatg gtaattgtag catttcagaa
3421 aatgtctttc atttcaatca ataaaaagct tttgtaaaat t
//