LOCUS AK125700 1972 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ43712 fis, clone TESOP2004114, highly similar
to Homo sapiens procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
(PLOD2), transcript variant 1, mRNA.
ACCESSION AK125700
VERSION AK125700.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1972)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Kanehori,K., Ishibashi,T., Chiba,Y., Fujimori,K., Hiraoka,S.,
Tanai,H., Watanabe,S., Ishida,S., Ono,Y., Hotuta,T., Watanabe,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Takahashi-Fujii,A., Oshima,A.,
Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..1972
/clone="TESOP2004114"
/clone_lib="TESOP2"
/db_xref="H-InvDB:HIT000045573"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="esophageal, tumor tissue"
CDS 510..1766
/codon_start=1
/note="highly similar to Homo sapiens procollagen-lysine,
2-oxoglutarate 5-dioxygenase 2 (PLOD2), transcript
variant 1, mRNA"
/protein_id="BAG54235.1"
/translation="MLENHILHKRIYILTFFSQQIFILCHAHFIFFFTVRDFCRQDEK
CDYYFSVDADVVLTNPRTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSE
DYVDIVQGNRVGVWNVPYMANVYLIKGKTLRSEMNERNYFVRDKLDPDMALCRNAREM
TLQREKDSPTPETFQMLSPPKGVFMYISNRHEFGRLLSTANYNTSHYNNDLWQIFENP
VDWKEKYINRDYSKIFTENIVEQPCPDVFWFPIFSEKACDELVEEMEHYGKWSGGKHH
DSRISGGYENVPTDDIHMKQVDLENVWLHFIREFIAPVTLKVFAGYYTKGFALLNFVV
KYSPERQRSLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIESPRKGWSFMHP
GRLTHLHEGLPVKNGTRYIAVSFIDP"
BASE COUNT 625 a 319 c 399 g 629 t
ORIGIN
1 aagtgctgac tgggaccgac agtgagggag gggagcccag agggaagttg ataacccaaa
61 tgtcatctgg tatctccagt tgttcattcc ttgatattgc tgatgataat gttacaaact
121 gtaccaggga aagcaaacat agtcactgcc cctggtaaga aggcagggga ataactatct
181 tagaaaattt gatgaaaatc aagtttgtaa aatattaata cctgaaaagt catatactta
241 catctccaac attcatttaa aactgagttg tgggatatgt aagttgcatt tgtgtgcatg
301 tgtatgtatg tatgtatgta tgcagaaaca ttttgatttg tggatgtttt atgccttaaa
361 atatttactg gcttgaaaat atattttaac tggcttaaaa ttttagaggt gagctccctg
421 tgaatatccg tgttaaattg accattttga aatttaagac aatatatata tcgtttcaga
481 tattgttcca ctattttgat cagaaaagta tgctagagaa ccatatttta cataaaagaa
541 tatatatatt aacatttttc agtcagcaga tatttatttt atgtcatgcc catttcattt
601 tctttttcac tgttagggac ttttgccgtc aggatgaaaa gtgtgattat tactttagtg
661 tggatgcaga tgttgttttg acaaatccaa ggactttaaa aattttgatt gaacaaaaca
721 gaaagatcat tgctcctctt gtaactcgtc atggaaagct gtggtccaat ttctggggag
781 cattgagtcc tgatggatac tatgcacgat ctgaagatta tgtggatatt gttcaaggga
841 atagagtagg agtatggaat gtcccatata tggctaatgt gtacttaatt aaaggaaaga
901 cactccgatc agagatgaat gaaaggaact attttgttcg tgataaactg gatcctgata
961 tggctctttg ccgaaatgct agagaaatga ctttacaaag ggaaaaagac tcccctactc
1021 cggaaacatt ccaaatgctc agccccccaa agggtgtatt tatgtacatt tctaatagac
1081 atgaatttgg aaggctatta tccactgcta attacaatac ttcccattat aacaatgacc
1141 tctggcagat ttttgaaaat cctgtggact ggaaggaaaa gtatataaac cgtgattatt
1201 caaagatttt cactgaaaat atagttgaac agccctgtcc agatgtcttt tggttcccca
1261 tattttctga aaaagcctgt gatgaattgg tagaagaaat ggaacattac ggcaaatggt
1321 ctgggggaaa acatcatgat agccgtatat ctggtggtta tgaaaatgtc ccaactgatg
1381 atatccacat gaagcaagtt gatctggaga atgtatggct tcattttatc cgggagttca
1441 ttgcaccagt tacactgaag gtctttgcag gctattatac gaagggattt gcactactga
1501 attttgtagt aaaatactcc cctgaacgac agcgttctct tcgtcctcat catgatgctt
1561 ctacatttac cataaacatt gcacttaata acgtgggaga agactttcag ggaggtggtt
1621 gcaaatttct aaggtacaat tgctctattg agtcaccacg aaaaggctgg agcttcatgc
1681 atcctgggag actcacacat ttgcatgaag gacttcctgt taaaaatgga acaagataca
1741 ttgcagtgtc atttatagat ccctaagtta tttacttttc attgaattga aatttatttt
1801 ggatgaatga ctggcatgaa cacgtctttg aagttgtggc tgagaagatg agaggaatat
1861 ttaaataaca tcaacagaac aacttcactt tgggccaaac atttgaaaaa ctttttataa
1921 aaaattgttt gatatttctt aatgtctgct ctgagcctta aaacacagat tg
//