LOCUS AK125659 4196 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ43671 fis, clone SYNOV4007553, highly similar
to Toll-like receptor 2 precursor.
ACCESSION AK125659
VERSION AK125659.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4196)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..4196
/clone="SYNOV4007553"
/clone_lib="SYNOV4"
/db_xref="H-InvDB:HIT000045532"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatioid
arthritis"
CDS 1405..3759
/codon_start=1
/note="highly similar to Toll-like receptor 2 precursor"
/protein_id="BAG54231.1"
/translation="MPHTLWMVWVLGVIISLSKEESSNQASLSCDRNGICKGSSGSLN
STPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL
EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD
TFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFV
DVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQI
SGLLELEFDDCTLNGVGNFRASDNDRVIDPGKVETLTIRRLHIPRFYLFYDLSTLYSL
TERVKRITVENSKVFLVPCLLSQHLKSLEYLDLSENLMVEEYLKNSACEDAWPSLQTL
ILRQNHLASLEKTGETLLTLKNLTNIDISKNSFHSMPETCQWPEKMKYLNLSSTRIHS
VTGCIPKTLEILDVSNNNLNLFSLNLPQLKELYISRNKLMTLPDASLLPMLLVLKISR
NAITTFSKEQLDSFHTLKTLEAGGNNFICSCEFLSFTQEQQALAKVLIDWPANYLCDS
PSHVRGQQVQDVRLSVSECHRTALVSGMCCALFLLILLTGVLCHRFHGLWYMKMMWAW
LQAKRKPRKAPSRNICYDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKRDFIPG
KWIIDNIIDSIEKSHKTVFVLSENFVKSEWCKYELDFSHFRLFDENNDAAILILLEPI
EKKAIPQRFCKLRKIMNTKTYLEWPMDEAQREGFWVNLRAAIKS"
BASE COUNT 1227 a 795 c 855 g 1319 t
ORIGIN
1 aagcactaat ggactaagac aaaaagattc cattatgaaa gtgaaaaggc aaccgcagag
61 tggcagaagc ttttggagat gatgaatatg tttacttcct ggattgcggt gatgatacca
121 tgagtgtata catatgtgtg tatacataat gtatacaaat tgtgttcatt gattatgtac
181 agtttctttg tataccaatt ataccttaat aaagctaagg aaaaaaaaaa gaaaatccag
241 aataaatatg catggtatga cccatttatt taaaaaaaaa aagagggaat gcgaagcagt
301 ggttttggtg cgaacacaaa aattctggct tcaacagcat ttaaattccc aaaccaagca
361 tgtttatgtt ttaattcttt gtggccataa attgtacagc tcaggccttt atagtctctc
421 agattctgtg aatgtgggga attagtttta ctcataaaaa gttttgttct tggggataaa
481 ttttttaaaa aaatttttgt atagttagca cactgagaaa atacagacaa aggcatacag
541 atgcaagaaa tgaggtagct gaatagacca aagaatgata tagggcccag aaggtaggca
601 aagagaaagt tgttgggttt atggttacaa gtaaactagc agttgtggtg cagatagttt
661 tatttccccc acattaatct gaacagccca tccagactta aacactgctt tttgcattta
721 cttctaggca ggaagacagg gttctgatgg tgtgagtctc cttcaactca gcaaaccacc
781 ttggtctgcc tcgagtttcc aacacccctc ctgcctgcta gtgataggtg tgaggcaggt
841 tgatgaacat ggaacttttt tcttttggtc ccaaagcatg ctactcctgg agtttcattc
901 agtgaatgag aactatagtt tggttctgtg agatctctat gaatcaaggc ggccactgaa
961 gcggagaaaa gaaatgctta aatgttaaga aagtttgaag tgcagaaaaa ggtgattgta
1021 aatccatatg gttaagctta gcccatttct taaaaggctt gattgctcat tcctccattc
1081 attgatttac tcactcttcc aatccatgtt attgagtctt gctctgtaat tccggatggt
1141 tgtgctttta agtactgcat agtggttgta tgtctgtgtt agcattgctg aatgtatcag
1201 ggaattcatt tttttatccc cattcattcg ttccattcat ctgtttctct ctctctctct
1261 ctttgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgttatgcc tagaaaacat
1321 ttctcaagaa ttagaattac gatatgctgt caaacacaat gacttatttg aacctctttt
1381 atttgtaggt tgaagcactg gacaatgcca catactttgt ggatggtgtg ggtcttgggg
1441 gtcatcatca gcctctccaa ggaagaatcc tccaatcagg cttctctgtc ttgtgaccgc
1501 aatggtatct gcaagggcag ctcaggatct ttaaactcca ctccctcagg gctcacagaa
1561 gctgtaaaaa gccttgacct gtccaacaac aggatcacct acattagcaa cagtgaccta
1621 cagaggtgtg tgaacctcca ggctctggtg ctgacatcca atggaattaa cacaatagag
1681 gaagattctt tttcttccct gggcagtctt gaacatttag acttatccta taattactta
1741 tctaatttat cgtcttcctg gttcaagccc ctttcttctt taacattctt aaacttactg
1801 ggaaatcctt acaaaaccct aggggaaaca tctctttttt ctcatctcac aaaattgcaa
1861 atcctgagag tgggaaatat ggacaccttc actaagattc aaagaaaaga ttttgctgga
1921 cttaccttcc ttgaggaact tgagattgat gcttcagatc tacagagcta tgagccaaaa
1981 agtttgaagt caattcagaa tgtaagtcat ctgatccttc atatgaagca gcatatttta
2041 ctgctggaga tttttgtaga tgttacaagt tccgtggaat gtttggaact gcgagatact
2101 gatttggaca ctttccattt ttcagaacta tccactggtg aaacaaattc attgattaaa
2161 aagtttacat ttagaaatgt gaaaatcacc gatgaaagtt tgtttcaggt tatgaaactt
2221 ttgaatcaga tttctggatt gttagaatta gagtttgatg actgtaccct taatggagtt
2281 ggtaatttta gagcatctga taatgacaga gttatagatc caggtaaagt ggaaacgtta
2341 acaatccgga ggctgcatat tccaaggttt tacttatttt atgatctgag cactttatat
2401 tcacttacag aaagagttaa aagaatcaca gtagaaaaca gtaaagtttt tctggttcct
2461 tgtttacttt cacaacattt aaaatcatta gaatacttgg atctcagtga aaatttgatg
2521 gttgaagaat acttgaaaaa ttcagcctgt gaggatgcct ggccctctct acaaacttta
2581 attttaaggc aaaatcattt ggcatcattg gaaaaaaccg gagagacttt gctcactctg
2641 aaaaacttga ctaacattga tatcagtaag aatagttttc attctatgcc tgaaacttgt
2701 cagtggccag aaaagatgaa atatttgaac ttatccagca cacgaataca cagtgtaaca
2761 ggctgcattc ccaagacact ggaaatttta gatgttagca acaacaatct caatttattt
2821 tctttgaatt tgccgcaact caaagaactt tatatttcca gaaataagtt gatgactcta
2881 ccagatgcct ccctcttacc catgttacta gtattgaaaa tcagtaggaa tgcaataact
2941 acgttttcta aggagcaact tgactcattt cacacactga agactttgga agctggtggc
3001 aataacttca tttgctcctg tgaattcctc tccttcactc aggagcagca agcactggcc
3061 aaagtcttga ttgattggcc agcaaattac ctgtgtgact ctccatccca tgtgcgtggc
3121 cagcaggttc aggatgtccg cctctcggtg tcggaatgtc acaggacagc actggtgtct
3181 ggcatgtgct gtgctctgtt cctgctgatc ctgctcacgg gggtcctgtg ccaccgtttc
3241 catggcctgt ggtatatgaa aatgatgtgg gcctggctcc aggccaaaag gaagcccagg
3301 aaagctccca gcaggaacat ctgctatgat gcatttgttt cttacagtga gcgggatgcc
3361 tactgggtgg agaaccttat ggtccaggag ctggagaact tcaatccccc cttcaagttg
3421 tgtcttcata agcgggactt cattcctggc aagtggatca ttgacaatat cattgactcc
3481 attgaaaaga gccacaaaac tgtctttgtg ctttctgaaa actttgtgaa gagtgagtgg
3541 tgcaagtatg aactggactt ctcccatttc cgtctttttg atgagaacaa tgatgctgcc
3601 attctcattc ttctggagcc cattgagaaa aaagccattc cccagcgctt ctgcaagctg
3661 cggaagataa tgaacaccaa gacctacctg gagtggccca tggacgaggc tcagcgggaa
3721 ggattttggg taaatctgag agctgcgata aagtcctagg ttcccatatt taagaccagt
3781 ctttgtctag ttgggatctt tatgtcacta gttatagtta agttcattca gacataatta
3841 tataaaaact acgtggatgt accgtcattt gaggacttgc ttactaaaac tacaaaactt
3901 caaattttgt ctggggtgct gttttataaa catatgccag atttaaaaat tggtttttgg
3961 tttttctttt ttctatgaga taaccatgat cataagtcta ttactgatat ctgaatatag
4021 tcccttggta tccaagggaa ttggttgcag gatcctcgtg gatatcaaaa ttcatagatg
4081 atcaagtccc ttataagagt ggcatagtat ttgcatataa cctgtgtaca ttctcctgta
4141 tactttaaat catctctaga ttacttatga tacccaatac aatgtaaata ctatgt
//