LOCUS AK125587 3241 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ43599 fis, clone SMINT2017781, highly
similar to PERIPHERIN.
ACCESSION AK125587
VERSION AK125587.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3241)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kanehori,K., Ishibashi,T., Chiba,Y., Fujimori,K., Hiraoka,S.,
Tanai,H., Watanabe,S., Ishida,S., Ono,Y., Hotuta,T., Watanabe,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Takahashi-Fujii,A., Oshima,A.,
Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..3241
/clone="SMINT2017781"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000045460"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 1500..2912
/codon_start=1
/protein_id="BAG54218.1"
/translation="MSHHPSGLRAGFSSTSYRRTFGPPPSLSPGAFSYSSSSRFSSSR
LLGSASPSSSVRLGSFRSPRAGAGALLRLPSERLDFSMAEALNQEFLATRSNEKQELQ
ELNDRFANFIEKVRFLEQQNAALRGELSQARGQEPARADQLCQQELRELRRELELLGR
ERDRVQVERDGLAEDLAALKQRLEEETRKREDAEHNLVLFRKDVDDATLSRLELERKI
ESLMDEIEFLKKLHEEELRDLQVSVESQQVQQVEVEATVKPELTAALRDIRAQYESIA
TKNLQEAEEWYKSKYADLSDAANRNHEALRQAKQEMNESRRQIQSLTCEVDGLRGTNE
ALLRQLRELEEQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLNVKMALDIE
IATYRKLLEGEESRISVPVHSFASLNIKTTVPEVEPPQDSHSRKTVLIKTIETRNGEV
VTESQKEQRSELDKSSAHSY"
BASE COUNT 635 a 1008 c 990 g 608 t
ORIGIN
1 agatgcactc tcttgtcctc aggtcccatc tgaggcagac ctgtctcaca ggacagcgct
61 ggagtcccca gcagcagcag cagccccagc cctatggttc ctggcaaacc cagcagacct
121 cagcaacccg gctcctgcag accatccgag ctgcctctgt ccactcctgg gcaggttgtg
181 cttgcattct ggaagctgtt tgacatacaa aggccagata tcagccttct cgctaactct
241 ggagtagggg agggtgtggt gggatgtgtg attgtgtgtg tatgtgtgtg tatgtagtgt
301 gtgtgcgcat agatatacaa agctgtgtgt atgcatctgt ttgcgtgcgc aggtttgtgg
361 acctgttctg gggccttctc tctttcagac tgctggggat gggcactttc tctttcccca
421 tctcttcccc atccagcccc acccatccct ggtacctgca actcatcaat actggaaacc
481 agctcctgcc agtccatcca tctctcagcc ttggcagccg ctgttgcccc tcagccccct
541 ccccttccta cctcaggaat cactctggtt cccgtaaagc ccatgactga gcagcaattg
601 gtgtggggtt ggggggaggg agaatccagt aaaccaagac agaatacaaa aggcccactt
661 agcccagccc gtggcatggg gcagaccctc ccgagtggga tccagagctg ggtccagcca
721 ccctcagccc cctatgatgt acccacctca ttggggcttg ttgcggggta ggtctaggtt
781 tgggggctgt gtctttaagg ctgaaacatc agcagacaac ctctgctggg ccgtcttcag
841 gggaggggga ggggggctgg tcagcccatt agcagcagag ctggcgccag gcaccagccc
901 ttcacagggc cctggggatt agggagagta gctcttcccc agcccgatct gcctctgcgc
961 ccctgtctcc tattcctctc tgggtgtggt gaaggagggg tagctgacag caggtgaaaa
1021 tagagcctgg ccttcagggg gcaagtcaag gcactagcta tggggcctaa gccaggtcaa
1081 ctctccctcc agctggcctc ctccctactc ctgtgccaga agcctgccct ttaacttcag
1141 gtccttctac ctcgcaattt tcagggactc tagttcaagt caggccttcc taccctaggt
1201 tctagctttg ggtgcttgtt gggaggaagt gacccccacc ccagcggcaa cagggggcaa
1261 tcaagtgggt agaggcctgc aaccagggaa gggaggggaa ggcgctcctg ctgttccgca
1321 ggggtggggc atccccctcc ccatacaacc cccctccagc gggccatcag gccagtggga
1381 ggagctgccc gtgccccccc tgagaccgca gggctataaa gccgcctcgc agcggtctgc
1441 ggctccttcc cagcccccgg cctagctctg cgaacggtga ctgcccatcc ttggccgcaa
1501 tgagtcacca cccgtcgggc ctccgggccg gcttcagctc cacctcatac cgccgtacct
1561 ttggtccacc gccctcacta tcccccgggg ccttctccta ctcgtccagc tcccgcttct
1621 ccagcagccg cctgctgggc tccgcgtccc cgagctcctc ggtgcgcctg ggcagcttcc
1681 gtagcccccg agcgggagcg ggcgccctcc tgcgcctgcc ctcggagcgc ctcgacttct
1741 ccatggccga ggccctcaac caggagttcc tggccacgcg cagcaacgag aagcaggagc
1801 tgcaggagct caacgaccgc ttcgccaact tcatcgagaa ggtacgcttt ctggagcagc
1861 agaacgcggc cctgcgcggg gagctgagcc aagcccgggg ccaggagccg gcgcgcgccg
1921 accagctgtg ccagcaggag ctgcgcgagc tgcggcgaga gctggagctg ttgggccgcg
1981 agcgtgaccg ggtgcaggtg gagcgcgacg ggctggcgga ggacctggcg gcgctcaagc
2041 agaggttgga ggaggagacg cgcaagcggg aggacgcgga gcacaacctc gtgctcttcc
2101 gcaaggacgt ggacgatgcc actctgtccc gcctggaact agagcgcaag attgagtctc
2161 tgatggatga gattgagttc ctcaagaagc tgcacgagga ggagctgcga gacctgcagg
2221 tgagtgtgga gagccagcag gtgcagcagg tggaggtgga agccacggtg aagcccgagc
2281 tgacggcagc gctgagggac atccgcgcgc agtacgagag catcgccacg aagaacctgc
2341 aggaggcgga ggagtggtac aagtccaagt acgcggacct gtccgacgct gccaaccgga
2401 accacgaggc cctgcgccag gccaagcagg agatgaacga gtcccgacgc cagatccaga
2461 gtctaacgtg cgaggtggac gggctgcgcg gcacgaacga ggcgctgctc aggcagttga
2521 gagagctgga ggagcagttc gccctggagg cggggggcta ccaggcgggc gctgcgcggc
2581 tcgaggagga gctgcgacag ctaaaggagg agatggcgcg gcacctgagg gagtaccagg
2641 agctcctcaa cgtcaagatg gccctggaca tcgagatcgc cacctaccgc aagctgctgg
2701 agggcgagga gagccggatc tccgtgcccg tccattcttt tgcctcctta aatataaaga
2761 cgactgtgcc tgaggtggag cctccccagg acagccacag ccggaagacg gttctgatca
2821 agaccattga gacccggaat ggggaggtgg tgacagagtc ccagaaggag cagcgcagtg
2881 agctggacaa gtcttctgcc cacagttact gaaccccttg gtccggagcc ttgactctgc
2941 cctaggcctg ctcaaagccc aaaccctaag accactcctg aattgtctcc tctccctctg
3001 catgtgtcta aaaggtggta ccaggcatcc ctttcctggc ttatggccaa gccctacccg
3061 gccagcagtc gctgggcctc tccctgccct gacacttgat gtgacctatg tgcttccctt
3121 ttcatgtccc gataagaagc caatgatccc ccctcaggac aaatctactc cagccacgat
3181 gagaagtggg tgggccaggg tctgagtttc acatttgaac caaataaaat gctgtcaaga
3241 g
//