LOCUS AK125179 2775 bp mRNA linear HUM 12-JUL-2008
DEFINITION Homo sapiens cDNA FLJ43189 fis, clone FCBBF3024266, highly similar
to Gamma-aminobutyric-acid receptor alpha-2 subunit precursor.
ACCESSION AK125179
VERSION AK125179.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2775)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..2775
/clone="FCBBF3024266"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000045052"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 679..2034
/codon_start=1
/note="highly similar to Gamma-aminobutyric-acid receptor
alpha-2 subunit precursor"
/protein_id="BAG54159.1"
/translation="MKTKLNIYNMQFLLFVFLVWDPARLVLANIQEDEAKNNITIFTR
ILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERL
KFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRL
TVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQY
DLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNR
ESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATV
NYFTKRGWAWDGKSVVNDKKKEKASVMIQNNAYAVAVANYAPNLSKDPVLSTISKSAT
TPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWATYLNREPVLGVS
P"
BASE COUNT 838 a 530 c 580 g 827 t
ORIGIN
1 aaaaaaaacg cgtcgtttcg cagcacttga tcggaacccg gctgcctcta agacttggtc
61 ttgggcaacc gtgggtgggc aggaagggaa attatttatt ttattttgtt aaggggagtg
121 aagaaaagaa gacgtgagga ccgcagttca ctgtaatgta gagtaattgc aaaagtgggc
181 tgcctgcccc tagcttttcc cgctgtggtt gcggaggtgg tcttggttga gggggttgtg
241 gcgtgaagta cccatctctc ctctcctctc ctttcctccc ctcccctcca acccattccc
301 tttccagctg ctatgccagt ttaaagtcca gggtgttatt attacgtgtg cgcaaaacag
361 tgtttgctga cgatgaggct gggggacgtt cctggcagag agaagtctga ttacttggtc
421 atcttgctgt taaagaaaga aagaaagaaa aaaagaaaga aagaaacaga aaggaaaagg
481 gtgggggtgg gggtccataa aaaagaaatc gtctctcaat catcaagtcc tacacagagt
541 ccaggaagta atctccatag ctttaacacg aatccctaac taaaaggata ttctttgggg
601 ttacttggat agtgaaactg aaggcaattt taagtgtatt ttgtttttca ttccatggct
661 ttgtaaagag cggcggtgat gaagacaaaa ttgaacatct acaacatgca gttcctgctt
721 tttgttttct tggtgtggga ccctgccagg ttggtgctgg ctaacatcca agaagatgag
781 gctaaaaata acattaccat ctttacgaga attcttgaca gacttctgga tggttacgat
841 aatcggctta gaccaggact gggagacagt attactgaag tcttcactaa catctacgtg
901 accagttttg gccctgtctc agatacagat atggaatata caattgatgt tttctttcga
961 caaaaatgga aagatgaacg tttaaaattt aaaggtccta tgaatatcct tcgactaaac
1021 aatttaatgg ctagcaaaat ctggactcca gatacctttt ttcacaatgg gaaaaaatca
1081 gtagctcata atatgacaat gccaaataag ttgcttcgaa ttcaggatga tgggactctg
1141 ctgtatacca tgaggcttac agttcaagct gaatgcccaa tgcacttgga ggatttccca
1201 atggatgctc attcatgtcc tctgaaattt ggcagctatg catatacaac ttcagaggtc
1261 acttatattt ggacttacaa tgcatctgat tcagtacagg ttgctcctga tggctctagg
1321 ttaaatcaat atgacctgct gggccaatca atcggaaagg agacaattaa atccagtaca
1381 ggtgaatata ctgtaatgac agctcatttc cacctgaaaa gaaaaattgg gtattttgtg
1441 attcaaacct atctgccttg catcatgact gtcattctct cccaagtttc attctggctt
1501 aacagagaat ctgtgcctgc aagaactgtg tttggagtaa caactgtcct aacaatgaca
1561 actctaagca tcagtgctcg gaattctctc cccaaagtgg cttatgcaac tgccatggac
1621 tggtttattg ctgtttgtta tgcatttgtg ttctctgccc taattgaatt tgcaactgtt
1681 aattacttca ccaaaagagg atgggcttgg gatgggaaga gtgtagtaaa tgacaagaaa
1741 aaagaaaagg cttccgttat gatacagaac aacgcttatg cagtggctgt tgccaattat
1801 gccccgaatc tttcaaaaga tccagttctc tccaccatct ccaagagtgc aaccacgcca
1861 gaacccaaca agaagccaga aaacaagcca gctgaagcaa agaaaacttt caacagtgtt
1921 agcaaaattg acagaatgtc cagaatagtt tttccagttt tgtttggtac ctttaattta
1981 gtttactggg ctacatattt aaacagagaa cctgtattag gggtcagtcc ttgaattgag
2041 acccatgtta tctttgggat gtatagcaac attaaatttg gtttgttttg ctatgtacag
2101 tctgactaat aactgctaat ttgtgatcca acatgtacag tatgtatata gtgacatagc
2161 ttaccagtag acctttaatg gagacatgca tttgctaact catggaactg cagacagaaa
2221 gcactccatg cgaaaacagc cattgccttt tttaaagatt taccctagga cctgatttaa
2281 agtgaatttc aaatgacctg attaatttcc tattcttcca aatgagatga aaatggggat
2341 cctgtacaac cctttgtgga cccttttggt ttagctctta agtaggggta ttttctactg
2401 ttgcttaatt atgatggaag ataacattgt cattcctaga tgaatccttt gaagtaacaa
2461 acattgtatc tgacatcagc tctgttcatg agtgctcaga gtccctgcta atgtaattgg
2521 aagcttggta cacataagaa aaactagaga tttgaaatca gctatgaatt actctatata
2581 gtatctatag ccatgtacat attacagcat gacaagctca aataattatg agtcagcccg
2641 aaaggatgtt aattatgcct acgatgtaat aactattgga atgtcatggt cattacattt
2701 ttagcttcag agtttatttg aaagtaataa ttgaaatcct acaatttatt ttaatcattg
2761 gaaactacct taatt
//