LOCUS AK124934 2747 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ42944 fis, clone BRSTN2004863, highly similar
to PolypeptideN-acetylgalactosaminyltransferase 11 (EC 2.4.1.41).
ACCESSION AK124934
VERSION AK124934.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2747)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..2747
/clone="BRSTN2004863"
/clone_lib="BRSTN2"
/db_xref="H-InvDB:HIT000044807"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="subthalamic nucleus"
CDS 438..2264
/codon_start=1
/note="highly similar to
PolypeptideN-acetylgalactosaminyltransferase 11 (EC
2.4.1.41)"
/protein_id="BAG54116.1"
/translation="MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPVKG
SGPHGPSPKKFYPRFTRGPSRVLEPQFKANKIDDVIDSRVEDPEEGHLKLSSELGMIF
NERDQELRDLGYQKHAFNMLISDRLGYHRDVPDTRNAACKEKFYPPDLPAASVVICFY
NEAFSALLRTVHSVIDRTPAHLLHEIILVDDDSDFDDLKGELDEYVQKYLPGKIKVIR
NTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVMWLQPLLAAIREDRHTVVCPVIDI
ISADTLAYSSSPVVRGGFNWGLHFKWDLVPLSELGRAEGATAPIKSPTMAGGLFAMNR
QYFHELGQYDSGMDIWGGENLEISFRIWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQ
DTMTHNSLRLAHVWLDEYKEQYFSLRPDLKTKSYGNISERVELRKKLGCKSFKWYLDN
VYPEMQISGSHAKPQQPIFVNRGPKRPKVLQRGRLYHLQTNKCLVAQGRPSQKGGLVV
LKACDYSDPNQIWIYNEEHELVLNSLLCLDMSETRSSDPPRLMKCHGSGGSQQWTFGK
NNRLYQVSVGQCLRAVDPLGQKGSVAMAICDGSSSQQWHLEG"
BASE COUNT 697 a 613 c 701 g 736 t
ORIGIN
1 attttgagtt gattttcaca tagaggtggg aggctagttt cattcctctg catatgaata
61 tccagttttc ccagtatcat ctattgaaga tactgtcctt tccccaaggg atctctctgg
121 gatcttttac cttagtgcct ggtggagttc ctggaggtaa agcccacaga agtgtgggtc
181 tcgcacctcc tgagactgct tccccgagtt tctcactctc actagtccac accgagcatc
241 cagcaccagc ttatggctct ggcagtttct gctccaggtc tatagtgagc gagagctgct
301 actttttact tgggcattca ttcaaagtgt tgaagaataa cagcctctac catcccttat
361 tcactggctc atcagctgtc ccaggttttg ctcttctagg aaattgacaa tggcccttca
421 gctatgctag gtctataatg ggaagtgtca cagttcggta tttctgttat gggtgccttt
481 ttacatctgc gacctggaca gttttgcttt ttgtttattt caacttcagt gaagtgactc
541 agccacttaa gaatgtgccc gtcaaggggt ctgggcccca cggaccatct ccaaaaaaat
601 tctatccccg tttcactcga ggcccaagtc gagtgctcga gccacagttc aaagcaaaca
661 aaattgacga tgtgatagac agtcgtgttg aagatccaga agaaggccac ttgaaactct
721 cttctgaatt aggtatgatt tttaatgaac gcgatcaaga gttgagagac ttgggctatc
781 agaaacatgc ttttaatatg cttatcagtg accgcttggg ctaccacaga gatgtgccag
841 acacaaggaa tgcagcatgt aaagaaaagt tctacccacc tgacctgcca gctgctagtg
901 ttgttatctg tttctataat gaagcgtttt ctgccttgct tcggacagtg cacagtgtca
961 tagaccgcac gccagcacac ctgcttcatg agatcatcct tgtggatgat gatagtgact
1021 ttgatgattt gaaaggagaa ctagatgaat atgtccaaaa atacctccct ggaaaaatta
1081 aagtcataag aaatacaaag cgtgaggggt tgattcgagg gagaatgatt ggcgcggccc
1141 acgcgacagg agaagtcctt gtgttcctgg acagccactg tgaagtgaat gtgatgtggc
1201 tgcagccctt gctggccgcc atccgtgagg accggcacac cgtggtgtgc ccagtgattg
1261 acatcatcag cgccgacacg ctggcctaca gctcgtcccc tgtcgtccgc ggagggttca
1321 actggggact gcacttcaaa tgggatcttg tccccctttc tgagctagga cgagcggagg
1381 gagccactgc accaataaag tcaccaacaa tggctggagg tttgtttgcc atgaacagac
1441 agtatttcca tgaacttgga cagtatgata gtggcatgga tatctgggga ggagaaaatt
1501 tggaaatatc atttcggatc tggatgtgtg gcggtaagct cttcatcatc ccttgctcta
1561 gagtaggaca cattttccga aaaaggcgac catatggatc tcccgaaggc caggacacca
1621 tgacacacaa ctctttgcgg ctggcacatg tctggttgga tgaatacaag gagcagtatt
1681 tttccttaag acctgacctg aagacgaaaa gctatggcaa tatcagtgag cgtgtggaac
1741 tgagaaagaa gttgggctgt aaatcattta aatggtattt ggataatgta tacccagaga
1801 tgcagatatc tgggtcccac gccaaacccc aacaacccat ttttgtcaat agagggccaa
1861 aacgacccaa agtccttcaa cgtggaaggc tctatcacct ccagaccaac aaatgcctgg
1921 tggcccaggg ccgcccaagt cagaagggag gtctcgtggt gcttaaggcc tgtgactaca
1981 gtgacccaaa tcagatctgg atctataatg aagagcatga attggtttta aatagtctcc
2041 tttgtctaga tatgtcagag actcgctcat cagacccgcc acggctcatg aaatgccacg
2101 ggtcaggagg atcccagcag tggacctttg ggaaaaacaa tcggctatac caggtgtcgg
2161 ttggacagtg cctgagagca gtggatcccc tgggtcagaa gggctctgtc gccatggcga
2221 tctgcgatgg ctcctcttca cagcagtggc atttggaagg ttaaggtgga tgctgtggcg
2281 ggaacgttgc ttcatcaggc gttgcctccg gtgtggagtt tggggcttta ggaaagcctg
2341 ggttgggtgg agcagaacca tcttggagaa gatgacagtt ccctgtcctc ccggagatgc
2401 ctgggtgtgt tagcagaggt gacacgtgtc tgacagagac gggagctctg agtgtccacg
2461 ggtgaagaag tgagtgtcca cgggtgaaga agtgagtatg tttcacctgg acattaaggt
2521 gatgtttgag ctgctgttaa ggaatttctt gcttatagag gcaaaccaca gtatcatttt
2581 aactctagaa ttgggcttgt acagaaggat aaaacccagg aaaatggata tttctattca
2641 gatttattta tgcctctttt taatcccctt taatgatgca gtggttttta tctgatcagg
2701 aacttgtcat gatttccttt cttagacttc ataggagata gtgcttt
//