LOCUS AK124752 4537 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ42762 fis, clone BRAWH3002600, highly similar
to Homo sapiens protocadherin 21 (PCDH21), mRNA.
ACCESSION AK124752
VERSION AK124752.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4537)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Kawakami,B., Sugiyama,A., Takemoto,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..4537
/clone="BRAWH3002600"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000044625"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 104..1795
/codon_start=1
/note="highly similar to Homo sapiens protocadherin 21
(PCDH21), mRNA"
/protein_id="BAG54089.1"
/translation="MAPVFVGTPYYGYVYEDTLPGSEVLKVVAMDGDRGKPNRILYSL
VNGNDGAFEINETSGAISITQSPAQLQREVYELHVQVTEMSPAGSPAAQATVPVTIRI
VDLNNHPPTFYGESGPQNRFELSMNEHPPQGEILRGLKITVNDSDQGANAKFNLQLVG
PRGIFRVVPQTVLNEAQVTIIVENSAAIDFEKSKVLTFKAVDPDTGPWGEVKYSTYGT
GADLFLIHPSTGLIYTQPWASLDAEATARYNFYVKAEDMEGKYSVAEVFITLLDVNDH
PPQFGKSVQKKTMVLGTPVKIEAIDEDAEEPNNLVDYSITHAEPANVFDINSHTGEIW
LKNSIRSLDALHNITPGRDCLWSLEVQAKDRGSPSFSTTALLKIDITDAETLSRSPMA
AFLIQTKDNPMKAVGVLAGTMATVVAITVLISTATFWRNKKSNMVLPMRRVLRKRPSP
APRTIRIEWLKSKSTKAATKFMLKEKPPNENCNNNSPESSLLPRAPALPPPPSVAPST
GAAQWTVPTVSGSLTPQPTQPPPKPKTMGSPVQSTLISELKQKFEKKSVHNKAYF"
BASE COUNT 1129 a 1258 c 1192 g 958 t
ORIGIN
1 catcaccgtg gtcgccaagg atggcggtgg gaggcttcat ggggctgatg tggtgttctc
61 agccaccacc acggtcacgg tcaatgtgga ggatgttcag gacatggccc ctgtcttcgt
121 gggcacaccc tactatggct atgtgtacga ggacaccctt ccgggctcgg aggtactgaa
181 ggtggtcgcc atggatggag accggggcaa acccaatcga attctctaca gccttgtaaa
241 tgggaacgat ggagcctttg aaattaatga gacatctgga gccatctcca tcactcagag
301 cccggcccag ctccagagag aggtgtatga gctgcatgta caggtgactg aaatgagccc
361 tgcggggagc ccagctgccc aggccaccgt cccagtcacc atcaggattg tggacctcaa
421 caaccacccg ccaacattct atggagagag cggaccccaa aacaggtttg agctgtccat
481 gaatgagcac ccaccccagg gagagatcct gcggggcctc aagatcaccg tcaatgactc
541 cgaccaggga gccaatgcca aattcaactt gcagctggtg ggacccaggg gcatcttccg
601 agtggttcca cagacagtcc tgaatgaagc ccaagtcaca atcattgtgg agaactcagc
661 tgccattgac tttgaaaagt ccaaagtatt aaccttcaag gctgtggatc cagatacagg
721 accctggggc gaagtgaaat attccaccta tgggactggg gcagacctct tcctgatcca
781 cccatccact gggcttatct acacccagcc ctgggctagc ctggacgctg aggccactgc
841 caggtacaac ttctatgtga aggcagagga catggaaggc aagtacagcg tagctgaggt
901 gtttatcaca ctgctggatg tcaatgacca cccccctcag tttggaaaga gcgttcagaa
961 gaagacgatg gtgctaggga ccccagtgaa aattgaggcc atagacgagg atgcagagga
1021 acccaacaac ctggtggact attccatcac ccatgcagag cccgccaacg tgttcgacat
1081 caattcccac acgggggaga tctggctcaa gaattccatc cgctccctgg atgccctgca
1141 caacatcaca cctggaaggg actgcctatg gtccctagag gtgcaggcca aggaccgggg
1201 ctccccatcc ttcagcacca cagccttact caagattgac atcacagatg ctgagaccct
1261 ctcccggagc cccatggctg ccttcctgat acagaccaag gacaacccca tgaaggccgt
1321 gggtgtgctg gccggcacca tggccaccgt cgtggccatc actgtcctca tctccaccgc
1381 caccttctgg cgcaacaaga agtctaacat ggtcctgcca atgcggcggg tgctccgcaa
1441 gcggcccagc cctgcgcccc gcaccatccg cattgagtgg ctcaagtcca agagcaccaa
1501 agccgctacc aagttcatgc tcaaagagaa acctcccaat gagaactgta acaacaacag
1561 cccagaaagc tctctgctcc cgagagctcc ggctctccct ccaccaccca gcgtggcgcc
1621 cagcactggc gcagcccagt ggaccgtgcc taccgtctct ggctctctca ctccgcagcc
1681 gacccaaccc ccgccaaaac ccaaaactat gggaagcccc gtccagtcaa ctctgatctc
1741 tgagctcaag caaaagtttg agaagaagag tgtgcacaac aaggcttact tctagtgtgt
1801 gccctatgac cccccatctt tcctccgccc ctgaccccca ccaccctgct gctcggacta
1861 tgctcccctt cctctgctcc ttaaggtcac tgacccctgt tttgcacaat ggtataatcc
1921 ccactgtcct catctctacc gccaccttct ggcgcaacaa gaagttgagc tctgacaggg
1981 ctctagtcag ggccttgggc aagacattgg gctctaggat gcaattggca aatacgtccc
2041 cgttactcaa atccttggca ctactacaat gccctccatt cttcagggct gagaattgac
2101 gagaagccag ctcacccatc ccagacctca cagtccctca ggttctactg ggatctcatc
2161 atcatcctta gtcaagcagc agggccctgg ccacgtggag caacactgac tagaatctgg
2221 atcctgacgc ctgcagctga gagcaggagc aggaaaagga ggctcagcac tgtctcaggc
2281 tggaggtcag cgaacctcgt gggctgtagg aaagcaaatg taggtaaggg gagagcaagg
2341 atgcacagaa aacacactga ctgtgggact gtgccaggat gcatttggaa agatagagca
2401 ttctgtctgg gcagagactg tggaccctgg tatgcccacg tgggacagag gacacagagg
2461 tggaagattg atcttgccaa gagtgagggc agatgtctcc agccaggact gccctgagcc
2521 gcaaaatgtc aaagctggag ctatagaggt agccctaaag gcaactagaa gagcatcagg
2581 gctgctctct gaggagctgc cccaccagcc atccttgaag agacaattca gggcagttga
2641 tgaatatcag ggctgagatg tggggagact tccgttttta tccagctctt ttgctcacat
2701 cgcgtaacct tgggaaagct gtttaaagtt gctgatcatc ctcttcctca tctgtaaatg
2761 aagaaagtag gccctgtcta cctcacatgc aggtctaggg tgaggattga agaaaatagt
2821 ggtgatgagg gctttaacca agtgcaaagc ggcatgaatg caaagtattt ttctgcagcc
2881 cagttctgtg ggtgcagctc ttccagaaag tattaggagc ctcacatcta ctctgccaag
2941 cgccccagca ggcactgtgc tgggcttagg ggctaccact ggatgatggc attgccgtga
3001 ctcacacacc tctacttctg ttcttccctc actccatccc cgctaccgtc ctggccagct
3061 accgtcagag agaaccagag ctccaagtct ttaatttgcc aagatgaaga aaatgagttc
3121 tcaaggaggg aatgctttgc ttgaggccac acagcaggtt ggtagcaaag atcttgtcta
3181 gccagggcag cccttatcag cttgtgacaa ccttccccag gacagaagtc atacaaggcc
3241 tctggggtta atacaaatag gttgtgccct gctttaagga acctgctatc aggaaatcta
3301 catgtgtgca cagagagaga aaagtagaac agttctttgc atttggctct acttactaac
3361 aacccctcta gaatacattg gtgatttcat ttaaagagat tgtatgcatt tgtggctttc
3421 ctgatttctg agtctgtgtt tggaggtgtt actgagatgt gccagtgtgc agaatccttg
3481 ctggggtttc tacagtcccc aacgtgaaca gtattaagca agaggtggac tcgagcaatc
3541 caggagccca gactgagcaa ataagtactt tccagcctgt gtttcaggag aggactgtgc
3601 tggatcatgc ttgccctcca cagggaatac agcatcctta cagcttgcat gcaatcaacc
3661 tcttttgtaa atggaaaata aagtctgtta cccaaaggcc atgctgatcc cctgctccct
3721 gctttcattt atgtttgctg acctgtggag accagtcttt ctgacacaca gtgaagctca
3781 acttgcctcc tggctgcttc agcaggtgga tccattcttc gacccccaga tgtgactcta
3841 aagaaggctg aaaatttttg tccaaattgc catgcagata tcttgaacag caggacattt
3901 gcaggccttg tctactggac ttttctccca aacaggacaa gcccaggcag ggctgcatgg
3961 agaggaatgg aacctggagc tagaattaat tgcccactct cccaccctac cagtgcagcc
4021 cggcaagggc aggaattggg aggcctaggg tgggcatgaa agcttgggaa gcactgtcgt
4081 ctctcagaca ggcgtcctaa agacctctag gctggaagct tgggcttgca agtggatccg
4141 ggaccgaggg tggtctcttg gacaacccca ggaacttgga ccaaggcaga gccaatcttg
4201 caaactggcc atggatgggg aagtgcccgg tagccagcat gagccacact aggaaagagg
4261 aggagggtgc agccaaactt aaggcaccgg caagtgttgt cagcactgga ggagaccccg
4321 ccagtggggt gaggccagcc aagtccctgt gttacgaatg gtgggccaag gggctgtctg
4381 ctcggtccca gtaggacagg cagagctcca ggctggcacc atggtaggcc tccagggaaa
4441 gagctgggag gcaggaatgg cacactgggc aggcttgccc attcctggcc ctgagaatgg
4501 agctgtagcc tcatggacaa taaatggatg tgacacc
//