LOCUS AK124678 3467 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ42687 fis, clone BRAMY3001794, moderately
similar to Rattus norvegicus SCN circadian oscillatory protein
(Scop).
ACCESSION AK124678
VERSION AK124678.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3467)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..3467
/clone="BRAMY3001794"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000044551"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 51..1322
/codon_start=1
/protein_id="BAC85924.1"
/translation="MKRNGSRNCLNRRSRFGSRERDWLREDVKRGCVYLYGADTTTAT
TTTTTSSSSSSSSSSSDLHLVLCTVETPASEICAGEGRESLYLQLHGDLVRRLEPTER
PLQIVYDYLSRLGFDDPVRIQEEATNPDLGCMIRFYGEKPCHMDRLDRILLSGIYNVR
KGKTQLHKWAERLVVLCGTCLIVSSVKDCQTGKMHILPLVGGKIEEVKRRQYSLAFSS
AGAQAQTYHVSFETLAEYQRWQRQASKVVSQRISTVDLSCYSLEEVPEHLFYSQDITY
LNLRHNFMQLERPGGLDTLYKFSQLKGLNLSHNKLGLFPILLCEISTLTELNLSCNGF
HDLPSQIGNLLNLQTLCLDGNFLTTLPEELGNLQQLSSLGISFNNFSQIPEVYEKLTM
LDRVVMAGNCLEVLNLGVLNRMNHIKHVDLR"
BASE COUNT 925 a 715 c 747 g 1080 t
ORIGIN
1 aagcgcccgc gagccgccgg ccgggaggga tccgggtcct gaagagaaat atgaaacgca
61 atgggagcag aaattgtttg aataggagaa gtaggtttgg ttctcgagaa agagactggc
121 taagagaaga tgtaaagaga ggctgtgttt acctttatgg agcagacact accactgcca
181 ctacaaccac caccacctcc tcttcctctt cctcctcctc ctcttcctct gacttacatc
241 tcgtcctttg cactgtagag acaccagcat cagaaatatg tgctggagag ggaagagaaa
301 gtctttattt acagcttcat ggagacctgg tcaggagact ggaacctact gaacgacctc
361 ttcagatcgt ttatgattac ttatccaggc tgggatttga tgatcctgtg cgcatacagg
421 aggaggctac aaatcctgac ctcggctgta tgattcgatt ttatggtgaa aaaccatgcc
481 acatggatcg tttggatcga atcctattgt ctggcatcta taatgtacgc aagggaaaga
541 cccagctgca taagtgggct gagcgcctag ttgtcctctg tggtacctgc cttatcgttt
601 cctcagtgaa ggattgtcaa actggaaaga tgcacatttt gcctctggtt ggtggaaaga
661 tagaagaagt gaagcgacgg caatactccc ttgctttcag ctcagcagga gcccaagctc
721 agacctatca tgtcagcttc gagactttgg ccgagtacca gcgatggcaa cggcaagcat
781 ccaaggtggt gtcccagcga atcagtaccg tggatctctc gtgttacagc ctcgaggagg
841 ttcctgagca tctcttctat agtcaagata ttacctacct caacttgcga cacaacttca
901 tgcagttaga aagacccgga ggcctcgata cactctacaa attttctcaa ctgaagggcc
961 tgaacttgtc ccataataaa cttgggttgt ttcctatatt gttatgcgag atctctaccc
1021 tgactgagct caacctttcc tgtaatggat ttcatgacct accaagtcaa attggcaatc
1081 tgctaaatct tcaaaccctc tgtcttgatg gcaactttct gactacttta cctgaagaat
1141 tgggaaatct acaacagctt tcctccttgg gaatttcctt caacaacttt agtcaaattc
1201 ctgaggttta tgagaaactc actatgttag atagagtggt tatggcagga aattgcctgg
1261 aagtcctgaa cttaggggtg ctgaatagga tgaaccatat caagcatgtg gatttaaggt
1321 aaggttattc tttaccacac cttcctttaa attgactctg gtggaccttt atgtcttctg
1381 tttatgaaga tttgtttaaa acattagggt ttttaaaatt ttgttgttgt tttgagacaa
1441 ggtctcactt tgtcacccaa gctggcatac agtggcgcga tctcggccca ctgcagtctt
1501 gacctcccgt tctcaggcga ttctcccacc tcagcctccc gagtagttgg gacttcaggt
1561 gcgcaccacg aggcctggct aatttttttc tacttttggt ggagatgagg tttcaccatg
1621 ttgtgcaggc aggtctcgaa ctcctggact cgagcagtcc acccacctcg gcctcccaaa
1681 gtgctgggat tacagccacc gcacctggcc cataacttta ggttttttga atagtgtaga
1741 aatatatgtt ttcaaaggta tagtaagact ttatttatca ctcagtagca gagagattaa
1801 ggatcaggta gttgtaccat gtgatagaga ctatcaaatt gcctttgaca aagattgttc
1861 tcacttaccc tcccatcagt gtatattttt tattttaaaa attttttata gaggtggggt
1921 cttgctgtgt tgcccaggct ggtcttgaac tccctggctc aagtaatcct cctgccttgg
1981 cctcctaaag tgttgggatt gcaggtgtga gccagtgtgc ccgacccctc caccatttta
2041 tgagaattcc cattttctca tatctttgtc agtattggat tttagcattt ctttttattt
2101 atcatcagtc tagtaggttg aaaaaagtat ttcattgttt taatcaacgt ttatttacat
2161 agcagtgagg ttgaacatct ttttatatgt atattagtag tttgtagatt tccataaatg
2221 accatttttc tgttgagtca ttgggtttct tcttgatacc cattgtatta caattaaaat
2281 gttaagggtt tcattactaa gaacttttta tgagagtttt attttctagt cataatattt
2341 tcctaaagga agctggtaaa aagacaccta ctggatgttc tgttatttac agtaagccat
2401 tgatgtagct tgtaaagaca gtaagagagt tttttttttt tttaaaccac actggagact
2461 taagagagag attcatagaa atacaggaaa gtgagaatag acctgcataa attaaatcat
2521 acacctgtgt agaaaaaaac ccagaggtca ttttctataa tttgcctttg aactcttcca
2581 tatatatata tatatatatg tgcagattat ttccttgtct gttaattaat tttatgtttg
2641 aaccttagct ctagagatag agcaggcata gcaacaggaa gaagtatggc tccatcctta
2701 tactctggac atggtactgt tgtgactgct ttgctactca ctgactcaaa aggttgtgtt
2761 tatcttcctg ttcctttgtc ctacttagtg cccacctgac attattaggt atttggatat
2821 aagtgtttaa ctgttcgtag atatggcctc ttttttcctt ctctttatta atttgtatac
2881 gtatttgcca atttggattg tctaacttag ctgtaccttg agttattcat caactgtaat
2941 tatttatata gtaccttgca aaatgaggcg agtagtgaaa ttcttaagtt gtttaggaaa
3001 cagagaaagg gggccgggca cggtggctca tgcctgtaat cccagcactt tgggaggccg
3061 aggcaggcag atcatctgag gttaggagtt caagcctggc caacatggtg aaaccccagc
3121 tctactgaag gtacaaaaaa ttggcctggc atggtggggg tgattctagt cccggcaact
3181 tgggaggctg aagcaggaga atcgctttaa cctgggaggc agaggttgca gtgggccgag
3241 atcacgccat tgcactccag cctgcgcaac acagtgaaac tccatctcaa aaaaaaaaag
3301 taaacagaga aagggatcat acctgtccta ttttttattt ttattctggt aagcacattt
3361 aatagactct tatttatgat tattttcttg tttctgcgta ttaaggatga accatttgaa
3421 aaccatggtt attgaaaatc tggagggaaa taaacacatc acccacg
//