LOCUS AK124178 1990 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ42184 fis, clone THYMU2031994, highly similar
to Eukaryotic translation initiation factor 3 subunit 6.
ACCESSION AK124178
VERSION AK124178.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1990)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..1990
/clone="THYMU2031994"
/clone_lib="THYMU2"
/db_xref="H-InvDB:HIT000044051"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 780..1970
/codon_start=1
/note="highly similar to Eukaryotic translation
initiation factor 3 subunit 6"
/protein_id="BAG54018.1"
/translation="MVDFAMDVYKNLYSDDIPHALREKRTTVVAQLKQLQAETEPIVK
MFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYL
YFFRVLVPATDRNALSSLWGKLASEILMQNWDAAMEDLTRLKETIDNNSVSSPLQSLQ
QRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDV
RKRRQVLKDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFL
VACLEDFIENARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAK
IDSKLGHVVMGNNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD
SGFY"
BASE COUNT 595 a 338 c 413 g 644 t
ORIGIN
1 tttagtatgc atttccttat gattaatgac tttgagaacc ttttcatgtg tctgttggcc
61 atttggttgt cttcttttgc gaagtgccta tcttttagcc atttcaattg caaggtctgt
121 cttgtcttac tcatttatag gagttctgca tgtaatttgg aaggttcgat tttgctctca
181 tggctaaata ccctttgacc accttcatct ttattttttg cgggcagtga aatattgtgg
241 cattttcttg gatttttctt tccttgcaaa attaagttca gtacagaaat cttttctttt
301 gctgaagcat ttctgtctgt gaatattttg tagaatcttt acatattact cagtacactt
361 catgttgttg tgagtttgtg tatatatatc tatttgctcc ctgtactata ggttaaatta
421 tgcttttttg gatcctttgc aaagcaaaag cctgatctga catggttgac ttaaaaactt
481 ggtgcaggtt gtttcagcaa tgtggatgga gaagcatata ggagtttatt actgattacc
541 tggatgtgga gaagtgacag ctatatgtgc tttacaggaa agatggcatg ggttttattt
601 atacacagcc ttgcctagaa agggtaagag atggtttgta gggacacata aaaaataagg
661 tcatgtaaat cagaagtagg tgggaatgtc tacagtaatt ctcttcattt taaaattttt
721 agatatataa tgaaaaggaa ttattacaag gtaaattgga ccttcttagt gataccaaca
781 tggtagactt tgctatggat gtatacaaaa acctttattc tgatgatatt cctcatgctt
841 tgagagagaa aagaaccaca gtggttgcac aactgaaaca gcttcaggca gaaacagaac
901 caattgtgaa gatgtttgaa gatccagaaa ctacaaggca aatgcagtca accagggatg
961 gtaggatgct ctttgactac ctggcggaca agcatggttt taggcaggaa tatttagata
1021 cactctacag atatgcaaaa ttccagtacg aatgtgggaa ttactcagga gcagcagaat
1081 atctttattt ttttagagtg ctggttccag caacagatag aaatgcttta agttcactct
1141 ggggaaagct ggcctctgaa atcttaatgc agaattggga tgcagccatg gaagacctta
1201 cacggttaaa agagaccata gataataatt ctgtgagttc tccacttcag tctcttcagc
1261 agagaacatg gctcattcac tggtctctgt ttgttttctt caatcacccc aaaggtcgcg
1321 ataatattat tgacctcttc ctttatcagc cacaatatct taatgcaatt cagacaatgt
1381 gtccacacat tcttcgctat ttgactacag cagtcataac aaacaaggat gttcgaaaac
1441 gtcggcaggt tctaaaagat ctagttaaag ttattcaaca ggagtcttac acatataaag
1501 acccaattac agaatttgtt gaatgtttat atgttaactt tgactttgat ggggctcaga
1561 aaaagctgag ggaatgtgaa tcagtgcttg tgaatgactt cttcttggtg gcttgtcttg
1621 aggatttcat tgaaaatgcc cgtctcttca tatttgagac tttctgtcgc atccaccagt
1681 gtatcagcat taacatgttg gcagataaat tgaacatgac tccagaagaa gctgaaaggt
1741 ggattgtaaa tttgattaga aatgcaagac tggatgccaa gattgattct aaattaggtc
1801 atgtggttat gggtaacaat gcagtctcac cctatcagca agtgattgaa aagaccaaaa
1861 gcctttcctt tagaagccag atgttggcca tgaatattga gaagaaactt aatcagaata
1921 gcaggtcaga ggctcctaac tgggcaactc aagattctgg cttctactga agaaccataa
1981 agaaaagatg
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