LOCUS AK123897 2652 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ41903 fis, clone PEBLM2005183, highly similar
to 5'-3' exoribonuclease 1 (EC 3.1.11.-).
ACCESSION AK123897
VERSION AK123897.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2652)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..2652
/cell_type="peripheral blood mononuclear cells
(HPBMC5939)"
/clone="PEBLM2005183"
/clone_lib="PEBLM2"
/db_xref="H-InvDB:HIT000043770"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, peripheral blood mononuclear
cells"
/organism="Homo sapiens"
CDS 9..2426
/codon_start=1
/note="highly similar to 5'-3' exoribonuclease 1 (EC
3.1.11.-)"
/protein_id="BAG53979.1"
/translation="MARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIME
FIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCAP
EETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPH
LHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVD
LKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWTALDKNEGEMITSKDN
LEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHG
VQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPACYQ
HLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE
RKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNKIT
RIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDELTVEN
VASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLG
DKEQSNWAKEVQGISEHYLRRKGIIINETSAVVYAQLLTGRKYQINQNGEVRLEKQWS
KQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDV
ITEGRIRVIFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFI
GRGSRRK"
BASE COUNT 884 a 442 c 544 g 782 t
ORIGIN
1 ctgaatttat ggccaggtta catgaacatc tgaagtattt tgtaaatatg aaaatttcca
61 cagacaagtc atggcaagga gttaccatct acttctcagg ccatgagact cctggagaag
121 gagagcataa aatcatggaa tttatcagat ccgagaaagc aaagccagat catgatccaa
181 acaccagaca ctgtctttat ggtttagatg ctgacttgat tatgcttgga ttaacaagtc
241 atgaggcaca tttttctctc ttaagagaag aagttcgatt tggtggcaaa aaaacacaac
301 gggtatgtgc tccagaagaa actacatttc accttctaca cttgtcttta atgagagagt
361 atattgacta tgagttttca gtattaaaag aaaagatcac atttaaatat gatattgaaa
421 ggataataga tgattggatt ttgatggggt ttcttgttgg taatgatttt atccctcatc
481 tacctcattt acatattaat catgatgcac tgcctcttct ttatggaaca tatgttacca
541 tcctgccaga acttgggggt tatattaatg aaagtgggca cctcaactta cctcgatttg
601 agaaatacct tgtgaaacta tcagattttg atcgggagca cttcagtgaa gtttttgtgg
661 acctaaaatg gtttgaaagc aaagttggta acaagtacct caatgaagca gcaggtgtcg
721 cagcagaaga agccaggaac tacaaggaaa agaaaaagtt aaagggccag gaaaattctc
781 tgtgttggac tgctttagac aaaaatgaag gcgaaatgat aacttctaag gataatttag
841 aagatgagac tgaagatgat gacctatttg aaactgagtt tagacaatat aaaagaacat
901 attacatgac gaagatgggg gttgacgtag tatctgatga ctttctggct gatcaagctg
961 catgttatgt tcaggcaata cagtggattt tgcactatta ctatcatgga gttcagtcct
1021 ggagctggta ttatccttat cattatgcac ctttcctgtc tgatatacac aacatcagta
1081 cactcaaaat ccattttgaa ctaggaaaac cttttaagcc atttgaacag cttcttgctg
1141 tacttccagc agccagcaaa aatttacttc ctgcatgcta ccagcatttg atgaccaatg
1201 aagactcacc aattatagaa tattacccac ctgattttaa aactgaccta aatgggaaac
1261 aacaggaatg ggaagctgtg gtgttaatcc cttttattga tgagaagcga ttattggaag
1321 ccatggagac atgtaaccac tccctcaaaa aggaagagag gaaaagaaac caacatagtg
1381 agtgcctaat gtgctggtat gatagagaca cagagtttat ctatccttct ccatggccag
1441 aaaagttccc tgccatagaa cgatgttgta caaggtataa aataatatcc ttagatgctt
1501 ggcgtgtaga cataaacaaa aacaaaataa ccagaattga ccagaaagca ttatatttct
1561 gtggatttcc tactctgaaa cacatcagac acaaattttt tttgaagaaa agtggtgttc
1621 aagtattcca gcaaagcagt cgtggagaaa acatgatgtt ggaaatctta gtggatgcag
1681 aatcagatga acttaccgta gaaaatgtag cttcatcagt gcttggaaaa tctgtctttg
1741 ttaattggcc tcaccttgag gaagctagag tcgtggctgt atcagatgga gaaactaagt
1801 tttacttgga agaacctcca ggaacacaga agctttattc aggaagaact gccccaccat
1861 ctaaagtggt tcatcttgga gataaagaac aatctaactg ggcaaaagaa gtacaaggaa
1921 tttcagaaca ctacctgaga agaaaaggaa taataataaa tgaaacatct gcagttgtgt
1981 atgctcagtt actcacaggt cgtaaatatc aaataaatca aaatggtgaa gttcgtctag
2041 agaaacagtg gtcaaaacaa gttgttcctt ttgtttatca aactattgtc aaggacatcc
2101 gagctttcga ctcccgtttc tccaatatca aaacattgga tgatttgttt cctctgagaa
2161 gtatggtctt tatgctggga actccctatt atggctgcac tggagaagtt caggattcag
2221 gtgatgtgat tacagaaggt aggattcgtg tgattttcag cattccatgt gaacccaatc
2281 ttgatgcttt aatacagaac cagcataaat attctataaa gtacaaccca ggatatgtgt
2341 tggccagtcg ccttggagtg agtggatacc ttgtttcaag gtttacagga agtattttta
2401 ttggaagagg atctaggaga aagtaagttt atgttagaga aatttactta aagtggcaga
2461 aaaattaaat gataaagatt aaatgcttaa tatttcagta tttattttct tattaattgc
2521 tctggattgt cttaaaattg tgcataaatt tctctgatgg taatctttca tctgaatggc
2581 acatgtttta ggtggttgga aaagacagtt cttatttttt agcagctaat aaattgaacc
2641 ttgaaaaaag gt
//