LOCUS AK123845 3622 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ41851 fis, clone NT2RI3003925, highly similar
to Endothelial PAS domain-containing protein 1.
ACCESSION AK123845
VERSION AK123845.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3622)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Suzuki,O., Sasaki,N., Aotsuka,S., Shoji,T., Ichihara,T.,
Shiohata,N., Matsumoto,K., Hirano,M., Sano,S., Nomura,R.,
Yoshikawa,Y., Matsumura,Y., Moriya,S., Chiba,E., Momiyama,H.,
Onogawa,S., Kaeriyama,S., Satoh,N., Matsunawa,H., Takahashi,E.,
Kataoka,R., Kuga,N., Kuroda,A., Satoh,I., Kamata,K., Takami,S.,
Terashima,Y., Watanabe,M., Sugiyama,T., Irie,R., Otsuki,T.,
Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..3622
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI3003925"
/clone_lib="NT2RI3"
/db_xref="H-InvDB:HIT000043718"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 576..1586
/codon_start=1
/note="highly similar to Endothelial PAS
domain-containing protein 1"
/protein_id="BAG53969.1"
/translation="MDGEDFQLSPICPEERLLAENPQSTPQHCFSAMTNIFQPLAPVA
PHSPFLLDKFQQQLESKKTEPEHRPMSSIFFDAGSKASLPPCCGQASTPLSSMGGRSN
TQWPPDPPLHFGPTKWAVGDQRTEFLGAAPLGPPVSPPHVSTFKTRSAKGFGARGPDV
LSPAMVALSNKLKLKRQLEYEEQAFQDLSGGDPPGGSTSHLMWKRMKNLRGGSCPLMP
DKPLSANVPNDKFTQNPMRGLGHPLRHLPLPQPPSAISPGENSKSRFPPQCYATQYQD
YSLSSAHKVSGMASRLLGPSFESYLLPELTRYDCEVNVPVLGSSTLLQGGDLLRALDQ
AT"
BASE COUNT 877 a 917 c 895 g 933 t
ORIGIN
1 ggaaccaaag tctctgtccc tggggtctgg ctgttaggct gttactctgc gagagtccac
61 agatggacct gggcacttac tgcttgctta ggcccgtgcc agcttacagg agggagaaga
121 ggacaaaaaa aagccgcagt gtgcaccaca ggcctaagca ttgtaggaca aggataacca
181 ccacaggctg gagtaggcag ggctgactct gtggaagagg ggctgcctcg gcttcaagag
241 agaaggcggg ctccggacag gtgggatggg gagaggagaa catttctcaa tgtgcagggt
301 gaagagggga taaacatggg ggaaggctgg tacatgatac aaggtcgtgt acatgacaca
361 gccaagtctg aggttttcct gataggccct cgggagccag tggaggcgtt tgagcagcac
421 tgtgaaacag tgcttgagat gaatggctct gcaggagctg agttggaata gtgtttgtga
481 ggtcgtacca acccccttgc ctctttgccg gtgctgtctc ccctcagacg gatttcaatg
541 agctggactt ggagacactg gcaccctata tccccatgga cggggaagac ttccagctaa
601 gccccatctg ccccgaggag cggctcttgg cggagaaccc acagtccacc ccccagcact
661 gcttcagtgc catgacaaac atcttccagc cactggcccc tgtagccccg cacagtccct
721 tcctcctgga caagtttcag cagcagctgg agagcaagaa gacagagccc gagcaccggc
781 ccatgtcctc catcttcttt gatgccggaa gcaaagcatc cctgccaccg tgctgtggcc
841 aggccagcac ccctctctct tccatggggg gcagatccaa tacccagtgg cccccagatc
901 caccattaca ttttgggccc acaaagtggg ccgtcgggga tcagcgcaca gagttcttgg
961 gagcagcgcc gttggggccc cctgtctctc caccccatgt ctccaccttc aagacaaggt
1021 ctgcaaaggg ttttggggct cgaggcccag acgtgctgag tccggccatg gtagccctct
1081 ccaacaagct gaagctgaag cgacagctgg agtatgaaga gcaagccttc caggacctga
1141 gcggggggga cccacctggt ggcagcacct cacatttgat gtggaaacgg atgaagaacc
1201 tcaggggtgg gagctgccct ttgatgccgg acaagccact gagcgcaaat gtacccaatg
1261 ataagttcac ccaaaacccc atgaggggcc tgggccatcc cctgagacat ctgccgctgc
1321 cacagcctcc atctgccatc agtcccgggg agaacagcaa gagcaggttc cccccacagt
1381 gctacgccac ccagtaccag gactacagcc tgtcgtcagc ccacaaggtg tcaggcatgg
1441 caagccggct gctcgggccc tcatttgagt cctacctgct gcccgaactg accagatatg
1501 actgtgaggt gaacgtgccc gtgctgggaa gctccacgct cctgcaagga ggggacctcc
1561 tcagagccct ggaccaggcc acctgagcca ggccttctac ctgggcagca cctctgccga
1621 cgccgtccca ccagcttcac tctctccgtc tgtttttgca actaggtatt tctaacgcca
1681 gcacactatt tacaagatgg acttacctgg cagacttgcc caggtcacca agcagtggcc
1741 tttttctgag atgctcactt tattatccct atttttaaag tacacaattg ttttacctgt
1801 tctgaaatgt tcttaaattt tgtaggattt ttttcctccc caccttcaat gacttctaat
1861 ttatattatc cataggtttc tctccctcct tctccttctc acacacaact gtccatacta
1921 acaagtttgg tgcatgtctg ttcttctgta gggagaagct ttagcttcat tttactaaaa
1981 agattcctcg ttattgttgt tgccaaagag aaacaaaaat gattttgctt tccaagcttg
2041 gtttgtggcg tctccctcgc agagcccttc tcgtttcttt tttaaactaa tcaccatatt
2101 gtaaatttca gggttttttt ttttttgttt aagctgactc tttgctctaa ttttggaaaa
2161 aaagaaatgt gaagggtcaa ctccaacgta tgtggttatc tgtgaaagtt gcacagcgtg
2221 gcttttccta aactggtgtt tttcccccgc atttggtgga ttttttatta ttattcaaaa
2281 acataactga gttttttaaa agaggagaaa atttatatct gggttaagtg tttatcatat
2341 atatgggtac tttgtaatat ctaaaaactt agaaacggaa atggaatcct gctcacaaaa
2401 tcactttaag atcttttcga agctgttaat ttttcttagt gttgtggaca ctgcagactt
2461 gtccagtgct cccacggcct gtacggacac tgtggaaggc ctccctctgt cggctttttg
2521 ccatctgtga tatgccatag gtgtgacaat ccgagcagtg gagtcattca gcgggagcac
2581 tgcgcgctat cccctcacat tctctatgta ctatgtatgt atgtattatt attattgctg
2641 ccaagagggt ctgatggcac gttgtggggt cggggggtgg ggcggggaag tgctctaact
2701 tttcttaagg ttttgttgct agcccttcaa gtgcactggg ctatgtgact cggatggtct
2761 ttcacacggc acatttggac atttccagaa ctaccatgag atggtttaga cgggaattca
2821 tgcaaatgag gggtcaaaaa tggtatagtg accccgtcca cgtcctccaa gctcacgacc
2881 ttggagcccc gtggagctgg actgaggagg aggctgcaca gcgggagagc agctggtcca
2941 gaccagccct gcagccccca ctcagccggc agccagatgg ccccgcaagg cctccaggga
3001 tggcccctag ccacaggccc tggctgaggt ctctgggtcg gtcagtgaca tgtaggtagg
3061 aagcactgaa aatagtgttc ccagagcact ttgcaactcc ctgggtaaga gggacgacac
3121 ctctggtttt tcaataccaa ttacatggaa cttttctgta atgggtacaa tgaagaagtt
3181 tctaaaaaca cacacaaagc acattgggcc aactatttag taagcccgga tagacttatt
3241 gccaaaaaca aaaaatagct ttcaaaagaa atttaagttc tatgagaaat tccttagtca
3301 tggtgttgcg taaatcatat tttagctgca cggcattacc ccacacaggg tggcagaact
3361 tgaagggtta ctgacgtgta aatgctggta tttgatttcc tgtgtgtgtt gccctggcat
3421 taagggcatt ttacccttgc agttttacta aaacactgaa aaatattcca agcttcatat
3481 taaccctacc tgtcaacgta acgatttcat gaacgttatt atattgtcga attcctactg
3541 acaacattat aactgtatgg gagcttaact ttataaggaa atgtattttg acactggtat
3601 cttattaaag tattctgatc ct
//