LOCUS AK123320 2611 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ41326 fis, clone BRAMY2046984, highly similar
to PDZ domain-containing protein 6.
ACCESSION AK123320
VERSION AK123320.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2611)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..2611
/clone="BRAMY2046984"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000043193"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 893..2272
/codon_start=1
/note="highly similar to PDZ domain-containing protein 6"
/protein_id="BAG53888.1"
/translation="MELDMALSDLEAADFAELSEDYYDMRRLYTILGSSLFYKGYLIC
SHLPKDDLIDIAVYCRHYCLLPLAAKQRIGQLIIWREVFPQHHLRPLADSSTEVFPEP
EGRYFLLVVGLKHYMLCVLLEAGGCASKAIGSPGPDCVYVDQVKTTLHQLDGVDSRID
ERLASSPVPCLSCADWFLTGSREKTDSLTTSPILSRLQGTSKVATSPTCRRTLFGDYS
LKTRKPSPSCSSGGSDNGCEGGEDDGFSPHTTPDAVRKQRESQGSDGLEESGTLLKVT
KKKSTLPNPFHLGNLKKDLPEKELEIYNTVKLTSGPENTLFHYVALETVQGIFITPTL
EEVAQLSGSIHPQLIKNFHQCCLSIRAVFQQTLVEEKKKGLNSGDHSDSAKSVSSLNP
VKEHGVLFECSPGNWTDQKKAPPVMAYWVVGRLFLHPKPQELYVCFHDSVTEIAIEIA
FKLFFGLTL"
BASE COUNT 775 a 474 c 538 g 824 t
ORIGIN
1 atatggctaa aaccaagtat ttcggttttt tctgtcattt tgttttttga gttctttaat
61 gttatacctt cagtagtaaa gaggggagga aataacttat gcttattatg tacttactgt
121 ttaccagtaa ataataagca taataagaac ttatgcttgt tatgttctag gcattctgca
181 tgtgagctag attgtattaa ccctgttttt acagagttgg aaaccaaagt tagagaaagg
241 ttaggtgatt tgcctgtgat agctacctag aaagagctgt gataagccag atctgttcta
301 ttacaaagtt caaaatctct ttatcattcc acgttgcctg aaagatttca ggagttgtaa
361 atggttaaaa gacagtcaga ggtaaaaaca acctatattt tttacaaaaa gggtacttca
421 gccctttctt ttataaatat gtcacttgtg ttagccctgt ggttcttcca tagagccatc
481 tacttgatac acttgagagt aggttttagg gtaaaaagtt tggacagggt aaatttcttt
541 acacaatccg tcagtaacat tctagcagca attctattga aggaagagag gagtgaggaa
601 gatagcctat gtagttggga aagatccagt tcccttagga gcacacaaaa aatgaccacc
661 atttccatat gtcgttctaa cttacagctc ttatttctcc agtgcctttt gccagattga
721 gaatgttcct cgtttggatc atttttttaa cttgttcttt caaagagcac ttcagcctgc
781 gaaactgcat ttcagcgcca gtcccagtgc tcagcagtac gatgcttcca gtgcagtact
841 tttagacaac ctccctggag tccggtggct cacacttcca ctggaaatca agatggaatt
901 agacatggca ttaagtgact tggaggctgc agattttgca gaactgtccg aggattacta
961 tgacatgagg cggctgtata caattttggg gtcttctcta ttttacaagg gttatttgat
1021 atgcagtcat ttgcccaagg atgatcttat tgatattgcc gtatactgtc gccactattg
1081 cctgctgcct ttagcagcaa aacaaagaat tggtcagttg atcatatgga gagaagtgtt
1141 tcctcagcat cacctccgac ctttggcaga ctcaagcact gaagtctttc cggaacctga
1201 aggaagatat tttttgctag ttgttggctt gaaacattat atgctatgtg tactattaga
1261 agctggaggt tgcgcatcca aagctattgg gagtcctgga ccagactgtg tatatgtgga
1321 tcaagtcaaa acaactcttc accagctgga tggagtagat tctcgcatag atgaacggct
1381 agcatcttct ccagtcccct gtttgtcttg tgctgactgg ttccttactg gatcacgtga
1441 aaaaacagat agcttgacca cttcgcctat tctcagtagg ctacaaggta cttccaaagt
1501 agcaacttct ccaacatgca gaagaacgct ttttggtgac tattccttaa agacacgcaa
1561 gcctagtcct tcctgtagta gtggaggatc tgacaatggt tgtgaaggtg gagaagatga
1621 tggctttagc ccccatacta caccggatgc agtacggaag caaagagaat ctcagggctc
1681 tgatggttta gaagaaagtg ggaccttgct taaggtcact aaaaagaagt ctactcttcc
1741 aaatccattt catttgggaa acttgaaaaa ggaccttcca gaaaaagaat tagaaatata
1801 taacacagtg aaactgacat ctggtcctga gaacacactt ttccactacg ttgccttaga
1861 aacagtgcaa ggaatcttta ttactcctac ccttgaagag gtggcacagc taagtggctc
1921 tatccaccct cagctaataa agaatttcca tcagtgttgt ctttccattc gtgcagtttt
1981 ccaacagaca ttggtggaag agaaaaagaa aggactaaat agtggagacc attcagattc
2041 tgcaaagtca gtgtcttctc ttaaccctgt taaagaacat ggtgtgttgt ttgaatgttc
2101 acctggaaac tggactgatc agaaaaaagc accaccagtt atggcttact gggtagtagg
2161 gagacttttt cttcatccaa aacctcaaga actttatgtc tgttttcatg actcagtcac
2221 agaaattgcc attgaaatag cttttaaatt gttctttggg ttaaccttgt agctgtgctt
2281 tcttgatgcg tagaaacacg tgcatggagg atcaaacact gtcagaattg ctgaaatcaa
2341 tacacaaaga gataaagttt agcttctttt tactattcaa tattgaacat aatattgtta
2401 aatattgaga tgaaatgctg ttggatttga tacattaaat cttaatgtaa tattgtaaga
2461 cttttgagaa tatacttgat taaaatgtga aagaagggat tgttaactta ttgctatttt
2521 ggtatataat gttaatttat tgactagttt gaaataatgt gaagtgtttt ttatatcaga
2581 ttaatatagg aaatgtttat tcttgaaaaa t
//