LOCUS AK123038 4433 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ41043 fis, clone NT2RP7000359, weakly
similar to PROTEIN-TYROSINE PHOSPHATASE D1 (EC 3.1.3.48).
ACCESSION AK123038
VERSION AK123038.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4433)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..4433
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7000359"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000042911"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 48..3902
/codon_start=1
/protein_id="BAC85520.1"
/translation="MHVFIVGMSLSSVTLASALQVRGEALSEEEIWSLLFLAAEQLLE
DLRNDSSDYVVCPWSALLSAAGSLSFQGRVSHIEAAPFKAPELLQGQSEDEQPDASQP
LQLCEPLHSILLTMCEDQPHRRCTLQSVLEACRVHEKEVSVYPAPAGLHIRRLVGLVL
GTISEVEKRVVEESSSVQQNRSYLLRKRLRGTSSESPAAQAPECLHPCRVSERSTETQ
SSPEPHWSTLTHSHCSLLVNRALPGADPQDQQAGRRLSSGSVHSAADSSWPTTPSQRG
FLQRRSKFSRPEFILLAGEAPMTLHLPGSVVTKKGKSYLALRDLCVVLLNGQHLEVKC
DVESTVGAVFNAVTSFANLEELTYFGLAYMKSKEFFFLDSETRLCKIAPEGWREQPQK
TSMNTFTLFLRIKFFVSHYGLLQHSLTRHQFYLQLRKDILEERLYCNEEILLQLGVLA
LQAEFGNYPKEVESKPYFHVEDYIPASLIERMTALRVQVEVSEMHRLSSALWGEDAEL
EFLRVTQQLPEYGVLVHQVFSEKRRPEEEMALGICAKGVIVYEVKNNSRIAMLRFQWR
ETGKISTYQKKFTITSSVTGKKHTFVTDSAKTSKYLLDLCSAQHGFNAQMGSGQPSHV
LFDHDKFVQMANLSPAHQARSKPLIWIQRLSCSENELFVSRLQGAAGGLLSTSMDNFN
VDGSKEAGAEGIGRSPCTGREQLKSACVIQKPMTWDSLSGPPVQSMHAGSKNNRRKSF
IAEPGREIVRVTLKRDPHRGFGFVINEGEYSGQADPGIFISSIIPGGPAEKAKTIKPG
GQILALNHISLEGFTFNMAVRMIQNSPDNIELIISQSKGVGGNNPDEEKNGTANSGVS
STDILSFGYQGSLSSHTQDQDRNTEELDMAGVQSLVPRLRHQLSFLPLKGAGSSCPPS
PPEISAGEIYFVELVKEDGTLGFSVTGGINTSVPYGGIYVKSIVPGGPAAKEGQILQG
DRLLQVDGVILCGLTHKQAVQCLKGPGQVARLVLERRVPRSTQQCPSANDSMGDERTA
VSLVTALPGRPSSCVSVTDGPKFEVKLKKNANGLGFSFVQMEKESCSHLKSDLVRIKR
LFPGQPAEENGAIAAGDIILAVNGRSTEGLIFQEVLHLLRGAPQEVTLLLCRPPPGAL
PEMEQEWQTPELSADKEFTRATCTDSCTSPILDQEDSWRDSASPDAGEGLGLRPESSQ
KAIREAQWGQNRERPWASSLTHSPESHPHLCKLHQERDESTLATSLEKDVRQNCYSVC
DIMRLGRYSFSSPLTRLSTDIF"
BASE COUNT 1102 a 1106 c 1172 g 1053 t
ORIGIN
1 gagtacgggc ccggacatgt tcctggacat tgcagaggcc ctgtcacatg catgtcttta
61 ttgtaggcat gagcctgtcc tctgtgacgc tggccagcgc cctacaggtc aggggtgaag
121 ctctttctga ggaggaaatc tggtccctcc tgttcctggc cgctgagcag ctcctggaag
181 acctccgcaa cgattcctcg gactatgtgg tttgcccctg gtcagccctg ctttctgcag
241 ctggaagcct ttctttccaa ggccgtgttt ctcatataga ggctgctcct ttcaaggccc
301 ctgaactgct acagggacag agtgaggatg agcagcctga tgcatctcag cccctgcagc
361 tctgcgagcc cctgcactcc atcctgctga ccatgtgtga agaccagcct cacaggcggt
421 gcacgttgca gtcggttctg gaagcttgtc gggttcatga gaaagaagtg tctgtctacc
481 cagcccctgc tggtctccac atcagaaggc tggttggctt ggttctgggt accatttctg
541 aggtggagaa aagagttgtg gaggaaagct cctctgtgca gcagaacaga agctacctgc
601 tcaggaagag gctgcgtggg acaagcagcg agagcccagc ggcacaggcc ccggagtgtc
661 tgcatccttg cagagtttca gaaagaagca cggagaccca gagctcacca gagccccatt
721 ggagcacctt gacacacagt cactgcagcc tccttgttaa ccgcgctctt ccaggagcag
781 atccccagga ccagcaggcg ggccggaggc tcagctctgg atctgtgcac tcggcagcag
841 acagctcatg gccaacaact ccttctcaga ggggttttct gcaaagaagg agcaagtttt
901 ccaggccaga gttcatcctg ttggctggag aggccccgat gacactacat ctgccgggat
961 cggttgtgac caaaaaaggg aaatcctatt tggctctcag ggacctctgt gtggtcctgc
1021 tgaacgggca gcacctggag gtaaaatgtg atgttgaatc aacagtggga gctgtcttca
1081 atgccgtgac atcctttgcc aacctcgagg aactcaccta ctttggcttg gcatatatga
1141 aaagcaaaga gttctttttc ctggacagtg aaaccagatt gtgcaaaata gctcctgaag
1201 gctggagaga gcagcctcag aagacctcca tgaatacctt cacactcttc ctgaggataa
1261 agttctttgt cagccactat gggctgctcc agcacagcct gacaaggcac cagttttacc
1321 tgcagcttcg gaaagatatc ctggaggaga ggctgtactg caatgaagag atactgctgc
1381 agctgggggt ccttgccttg caggctgagt ttggcaatta ccctaaggag gtggagagta
1441 agccatactt tcacgttgaa gattacatcc cagcgagtct gatcgagagg atgaccgctc
1501 tacgggtcca ggttgaagtc tcagagatgc accggctcag ctctgcactg tggggagagg
1561 atgctgagct ggagttcttg agggtcactc agcagctccc agaatatggt gtgctggttc
1621 accaagtatt ctcagagaag aggaggccag aagaggagat ggccctgggg atctgtgcca
1681 agggtgtcat agtctatgaa gtgaaaaaca acagcagaat tgcaatgtta cggtttcagt
1741 ggagagaaac cgggaagatt tctacttatc aaaaaaagtt caccatcaca agcagtgtca
1801 ctgggaagaa gcacacattt gtcacagatt cagccaagac cagtaaatac ttactggacc
1861 tctgctcagc ccagcatggg tttaatgcac agatgggctc tgggcagcct tcccatgttt
1921 tatttgacca tgataagttt gtgcaaatgg ccaatttgag tcctgcacac caggcccggt
1981 ctaagcctct catttggatt cagagattgt catgctcaga aaacgagttg tttgtatcca
2041 ggcttcaggg tgctgcagga ggcctgctga gtacatcaat ggataacttc aacgtggacg
2101 gcagcaagga ggctggagca gaaggcatcg ggcgcagccc ctgcactggc cgggagcagc
2161 tgaagagtgc ctgtgtgatc cagaagccaa tgacctggga ctctctctct ggaccacctg
2221 ttcagagcat gcatgcaggc tcaaagaata ataggaggaa gagctttata gctgaaccgg
2281 gccgagaaat tgtacgtgtg acactgaaac gtgacccaca tcgtggtttt gggtttgtca
2341 ttaatgaggg agagtattca ggccaagctg accctggcat ttttatatct tctattatac
2401 ctggaggacc agcagaaaaa gcaaaaacga tcaaaccagg agggcagata ctagccctga
2461 atcacatcag tctggagggc ttcacattca acatggctgt taggatgatc cagaattccc
2521 ctgacaacat agaattaatt atttctcagt caaaaggtgt tggtggaaat aacccagatg
2581 aagaaaagaa tggcacagcc aattctgggg tctcctctac agacatcctg agcttcgggt
2641 accagggaag tttgtcgtca cacacacaag accaggacag aaatactgaa gaactagaca
2701 tggctggggt gcagagctta gtgcccaggc tgagacatca gctttccttt ctgccgttaa
2761 agggtgctgg ttcttcttgt cctccatcac ctccagaaat cagtgctggt gaaatctact
2821 ttgtggaact ggttaaagaa gatgggacac ttggattcag tgtaactggt ggcattaaca
2881 ccagtgtgcc atatggtggt atctatgtga aatccattgt tcctggagga ccagctgcca
2941 aggaagggca gatcctacag ggtgaccgac tcctgcaggt ggatggagtg attctgtgcg
3001 gcctcaccca caagcaggct gtgcagtgcc tgaagggtcc tgggcaggtt gcaagactgg
3061 tcttagagag aagagtcccc aggagtacac agcagtgtcc ttctgctaat gacagcatgg
3121 gagatgaacg cacggctgtt tccttggtaa cagccttgcc tggcaggcct tcgagctgtg
3181 tctcggtgac agatggtcct aagtttgaag tcaaactaaa aaagaatgcc aatggtttgg
3241 gattcagttt cgtgcagatg gagaaagaga gctgcagcca tctcaaaagt gatcttgtga
3301 ggattaagag gctctttccg gggcagccag ctgaggagaa tggggccatt gcagctggtg
3361 acattatcct ggccgtgaat ggaaggtcca cggaaggcct catcttccag gaggtgctgc
3421 atttactgag aggggcccca caggaagtca cgctcctcct ttgccgaccc cctccaggtg
3481 cgctgcctga gatggagcag gaatggcaga cacctgaact ctcagctgac aaagaattca
3541 ccagggcaac atgtactgac tcatgtacca gccccatcct ggatcaagag gacagctgga
3601 gggacagtgc ctccccagat gcaggggaag gcctgggtct caggccagag tcttcccaaa
3661 aggccatcag agaggcacaa tggggccaaa acagagagag accttgggcc agttccttga
3721 cacattctcc tgagtcccac cctcatttat gcaaacttca ccaagaaagg gatgaatcaa
3781 cattggcgac ctctttggaa aaggatgtga ggcaaaactg ctattcagtt tgtgatatca
3841 tgagacttgg aagatattcc ttctcatctc ctctaaccag actttcgaca gatattttct
3901 gagcaccttc tctgcatgtc tgcagtgctg tgtaaaatgc cctacctttg catggactat
3961 tctttctaat caagaggcgt gtgtggcgaa cttggggcag cccctggaag tcttgttctt
4021 tgaccattac gtctgcggct gcatcaccag ataatgagct tcaccactcg tctgcctcct
4081 gtgtccttcc gcggggagta aatgtcactt cagcttgccg catctctaaa taggcaaatt
4141 ttcagtgctc agaaaaggac ctgatctttg cacaaagtgc tttgatggtt gcctgcttga
4201 gtcactccca atcccttcct gaagcccttt ctttataatt cttctgttga aatagccatc
4261 atattcacag tactaatcac agcatctcac atttactaaa aacttacccc acccccccgg
4321 tctcctgagc tcggtaaggt gctccagctg cttctatcat agcacttcct acatggactg
4381 taacatttct ttactgctcc aacttctcat taaattgggg gctcctcaaa gcc
//