LOCUS AK122990 2709 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ16751 fis, clone BEAST2001444, highly
similar to Orphan nuclear receptor PXR.
ACCESSION AK122990
VERSION AK122990.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2709)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..2709
/clone="BEAST2001444"
/clone_lib="BEAST2"
/db_xref="H-InvDB:HIT000042863"
/db_xref="taxon:9606"
/dev_stage="adult"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="breast"
CDS 469..1437
/codon_start=1
/protein_id="BAG53837.1"
/translation="MSDEAVEERRALIKRKKSERTGTQPLGVQGLTEEQRMMIRELMD
AQMKTFDTTFSHFKNFRLPGVLSSGCELPESLQAPSREEAAKWSQVRKDLCSLKVSLQ
LRGEDGSVWNYKPPADSGGKEIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQ
ISLLKGAAFELCQLRFNTVFNAETGTWECGRLSYCLEDTAGGFQQLLLEPMLKFHYML
KKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHRF
LFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFGITGS"
BASE COUNT 655 a 707 c 720 g 627 t
ORIGIN
1 cttatgtacc aggaactata ttaggcaccc tacatgcaag gtctcattta acagcggtgc
61 gaggtaaaca cggtttctcc ggatcacaaa ggagaaacct ggagacagga gaggttaagg
121 aggttgcttg gggtcacagg tagtaagtgg caaagctttc atgcaaaccc agcgcctttg
181 gattctgaag cccgtgctct tgccagggcc ccacagtgtc ctcacaaact ccactgcaga
241 gggcaaaaca ccagcctcac ctcatctctg tcctcaccca agtgtttctc cagaagagcc
301 cacaggcctc ttgagtccag acaggggaga attgcttgtc accattactt tctcttttgc
361 ctaacggctt ctgctgcctt gagagggtta cacagtggct ctccaggggg ctggaggctc
421 accaggggca cgtgtgcctg agccagcctc actgtccctg cagtgatcat gtccgacgag
481 gccgtggagg agaggcgggc cttgatcaag cggaagaaaa gtgaacggac agggactcag
541 ccactgggag tgcaggggct gacagaggag cagcggatga tgatcaggga gctgatggac
601 gctcagatga aaacctttga cactaccttc tcccatttca agaatttccg gctgccaggg
661 gtgcttagca gtggctgcga gttgccagag tctctgcagg ccccatcgag ggaagaagct
721 gccaagtgga gccaggtccg gaaagatctg tgctctttga aggtctctct gcagctgcgg
781 ggggaggatg gcagtgtctg gaactacaaa cccccagccg acagtggcgg gaaagagatc
841 ttctccctgc tgccccacat ggctgacatg tcaacctaca tgttcaaagg catcatcagc
901 tttgccaaag tcatctccta cttcagggac ttgcccatcg aggaccagat ctccctgctg
961 aagggggccg ctttcgagct gtgtcaactg agattcaaca cagtgttcaa cgcggagact
1021 ggaacctggg agtgtggccg gctgtcctac tgcttggaag acactgcagg tggcttccag
1081 caacttctac tggagcccat gctgaaattc cactacatgc tgaagaagct gcagctgcat
1141 gaggaggagt atgtgctgat gcaggccatc tccctcttct ccccagaccg cccaggtgtg
1201 ctgcagcacc gcgtggtgga ccagctgcag gagcaattcg ccattactct gaagtcctac
1261 attgaatgca atcggcccca gcctgctcat aggttcttgt tcctgaagat catggctatg
1321 ctcaccgagc tccgcagcat caatgctcag cacacccagc ggctgctgcg catccaggac
1381 atacacccct ttgctacgcc cctcatgcag gagttgttcg gcatcacagg tagctgagcg
1441 gctgcccttg ggtgacacct ccgagaggca gccagaccca gagccctctg agccgccact
1501 cccgggccaa gacagatgga cactgccaag agccgacaat gccctgctgg cctgtctccc
1561 tagggaattc ctgctatgac agctggctag cattcctcag gaaggacatg ggtgcccccc
1621 acccccagtt cagtctgtag ggagtgaagc cacagactct tacgtggaga gtgcactgac
1681 ctgtaggtca ggaccatcag agaggcaagg ttgccctttc cttttaaaag gccctgtggt
1741 ctggggagaa atccctcaga tcccactaaa gtgtcaaggt gtggaaggga ccaagcgacc
1801 aaggataggc catctggggt ctatgcccac atacccacgt ttgttcgctt cctgagtctt
1861 ttcattgcta cctctaatag tcctgtctcc cacttcccac tcgttcccct cctcttccga
1921 gctgctttgt gggctccagg cctgtactca tcggcaggtg catgagtatc tgtgggagtc
1981 ctctagagag atgagaagcc aggaggcctg caccaaatgt cagaagcttg gcatgacctc
2041 attccggcca catcattctg tgtctctgca tccatttgaa cacattatta agcaccgata
2101 ataggtagcc tgctgtgggg tatacagcat tgactcagat atagatcctg agctcacaga
2161 gtttatagtt aaaaaaacaa acagaaacac aaacaatttg gatcaaaagg agaaatgata
2221 agtgacaaaa gcagcacaag gaatttccct gtgtggatgc tgagctgtga tggcgggcac
2281 tgggtaccca agtgaaggtt cccgaggaca tgagtctgta ggagcaaggg cacaaactgc
2341 agctgtgagt gcgtgtgtgt gatttggtgt aggtaggtct gtttgccact tgatggggcc
2401 tgggtttgtt cctggggctg gaatgctggg tatgctctgt gacaaggcta cgctgacaat
2461 cagttaaaca caccggagaa gaaccattta catgcacctt atatttctgt gtacacatct
2521 attctcaaag ctaaagggta tgaaagtgcc tgccttgttt atagccactt gtgagtaaaa
2581 atttttttgc attttcacaa attatacttt atataaggca ttccacacct aagaactagt
2641 tttgggaaat gtagccctgg gtttaatgtc aaatcaaggc aaaaggaatt aaataatgta
2701 cttttggct
//