LOCUS AK122920 3873 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ16600 fis, clone TESTI4006704, highly similar
to Lipopolysaccharide-responsive and beige-like anchor protein.
ACCESSION AK122920
VERSION AK122920.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3873)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..3873
/clone="TESTI4006704"
/clone_lib="TESTI4"
/db_xref="H-InvDB:HIT000042793"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 13..2820
/codon_start=1
/note="highly similar to Lipopolysaccharide-responsive
and beige-like anchor protein"
/protein_id="BAG53798.1"
/translation="MSLCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINIL
TDKHGAWGNSAVSRPLEFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHATDE
DILAKGKQSIRSQALGNQNSENEILLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVA
PSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRY
LLQNTALEIFMANRVAVMFNFPDPATVKKVVNYLPRVGVGTSFGLPQTRRISLASPRQ
LFKASNMTQRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTL
PTNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPKFHYGTHYSTASFVLAWLLRIEP
FTTYFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPEMFVNFNNYN
LGVMDDGTVVSDVELPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPE
AVRALNVFYYLTYEGAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPRGSAMQ
VSPLMFTDKAQQDVIMVLKFPSNSPVTHVAANTQPGLATPAVITVTANRLFAVNKWHN
LPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYI
LVCGFWDKSFRVYSTDTGRLIQVVFGHWDVVTCLARSESYIGGNCYILSGSRDATLLL
WYWNGKCSGIGDNPGSETAAPRAILTGHDYEVTCATVCAELGLVLSGSQEGPCLIHSM
NGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGLFCTFSVNGKLQATMETDDNIRA
IQLSRDGQYLLTGGDRGVVVVRQVLDLKQLFAYPGCDAGIRAMALSYDQRCIISGMAS
GSIVLFYNDFNRWHHEYQTRY"
BASE COUNT 1086 a 813 c 854 g 1120 t
ORIGIN
1 gtttggtgat ttatgtcact gtgtgcccag tattctgcag acaaacgaga agatgagaag
61 atgtgtgatc atttgataag agcagcaaaa tatcgtgacc acgtgacagc aactcaacta
121 atccagaaaa ttatcaacat tctcacagac aagcatggag cctggggaaa ttctgcagtg
181 agtcgtcctc ttgagttctg gcgccttgac tactgggaag atgacttgcg gcgccggcga
241 cgatttgtgc gtaaccctct aggatcgaca catcctgaag cgacactaaa aacagccgtg
301 gaacatgcca cagatgaaga tatccttgct aaaggaaaac agtccatcag gagtcaggct
361 ttaggaaatc agaactcaga aaacgagatc ctcctggaag gcgatgatga tactctgtca
421 tccgtggatg agaaagattt agagaatctt gccggtcctg ttagcctgag cacaccagct
481 cagcttgtgg ccccctctgt tgtagtaaag ggcactcttt ctgtcacctc ctccgaactc
541 tattttgagg tggatgaaga ggatcctaac ttcaaaaaaa tcgaccccaa gatcttggca
601 tatacagaag ggctgcatgg aaaatggctg ttcacagaga tacgatcaat cttttctcgt
661 cgttatcttt tgcaaaatac agccctggag atctttatgg caaacagagt tgctgtgatg
721 ttcaacttcc cagaccctgc aacagtaaag aaagtggtta actatctacc tcgtgttggc
781 gttggaacaa gttttggatt gcctcaaacc agacgtattt cattagctag tccacgtcag
841 ctttttaagg cttctaatat gacccagcga tggcaacaca gagagatatc taattttgag
901 tacttgatgt ttctcaacac gatagcagga cggagttata atgacttaaa tcagtatcca
961 gtgtttcctt gggtcatcac taattatgaa tcagaagaac tggatcttac cttgcccacc
1021 aacttcagag atttgtccaa gccaatagga gctctgaacc caaaaagagc agcattcttc
1081 gctgagcgtt atgaatcatg ggaagatgat caagttccaa agtttcacta tggtactcat
1141 tactcaactg caagttttgt tcttgcatgg ctgctaagaa tagaaccctt tacaacttat
1201 ttcctaaatt tgcaaggagg caaatttgat catgcagatc gaactttttc atcaatttcc
1261 agagcttggc gaaacagtca gcgtgatacc tctgatatta aggagttgat ccctgaattt
1321 tattatctcc ctgagatgtt tgtcaacttc aataattata atcttggagt gatggatgat
1381 gggacagtag tgtctgatgt cgaacttcct ccttgggcca aaacctcaga agaatttgtt
1441 cacataaaca gattggccct ggagagtgaa tttgtttcct gccagcttca ccaatggatt
1501 gatctcattt ttggctataa acagcaagga ccagaagctg tccgagccct caatgtgttc
1561 tattacttga cctatgaagg agctgtcaat ctgaattcaa taactgatcc tgtgttgaga
1621 gaggctgttg aagctcaaat ccgaagtttt ggacagactc cttctcaact actcatagag
1681 ccccatcctc ccagaggttc tgccatgcaa gtgagtccat tgatgttcac agacaaagcc
1741 cagcaggatg ttatcatggt cctcaagttt ccctccaact cccctgttac tcacgtggca
1801 gccaacaccc agcctggttt ggcaactccc gctgtgatca cagtcactgc taacaggtta
1861 tttgcggtga acaaatggca caaccttcct gctcatcaag gtgctgtaca agaccagcca
1921 taccagctgc cagtggaaat cgatcctctc atagccagca atacaggaat gcacaggagg
1981 caaatcactg accttttaga ccaaagtatt caagtgcatt cccagtgctt tgtcatcact
2041 tcagacaacc gctatattct cgtctgtggc ttctgggata aaagtttcag agtctattct
2101 acagacacag gaagattgat ccaagtggtg tttggccatt gggatgtcgt cacttgcctt
2161 gctcgttctg agtcatatat tgggggaaat tgctacattc tctcagggtc acgtgatgca
2221 actcttttgc tgtggtattg gaatggaaaa tgcagtggga ttggagataa cccaggcagt
2281 gagactgctg ctcctcgggc cattttgacc ggccatgact atgaggtcac atgtgctacg
2341 gtgtgtgcgg agctaggcct ggtgttgagt ggttcacaag aaggaccatg tctcatacat
2401 tccatgaatg gagacttgtt gaggaccttg gagggtcctg aaaactgcct gaaaccaaaa
2461 ctcattcagg cttcaagaga gggtcattgt gtcatattct atgaaaacgg cctcttctgt
2521 acattcagtg tgaatgggaa actccaggcc acgatggaaa cagatgataa cataagagcc
2581 atccagctga gccgagatgg gcagtacctg ctcacaggag gagacagagg agtggtcgtg
2641 gtccggcagg tgttggacct caagcagctc tttgcctatc caggatgtga cgctggaatc
2701 cgggccatgg cgctgtctta cgaccagagg tgcatcattt ctggcatggc ttcaggaagc
2761 attgtgctat tttacaacga ctttaaccgg tggcatcatg aataccaaac ccgctactga
2821 tggtgacagc tgtacatcaa ctctgcccct aggatgagca gaagtacctg gagcatcatt
2881 ctcttctacc acatctgaat gtaacttaaa tttgctcaaa gaagcaaaat attttttaaa
2941 gttattaata attgctattt ttgtagtctt tgcttgactt ttttgggggg gattagcaaa
3001 gcagaaaact ggctgctggg ttctgtagtt ttaaaaaatc tatattttta gtcataatga
3061 gaagtctatt ttcaccaatt atggaaacat acagtggagc aagtaaacca cttattccag
3121 ctataatatt atgaagaaca tttcccatgc atctacaagc ttgagaaata ggattttcac
3181 agtggggaag tgggttacaa tattggaata ggaaaatttg atgctgtaat ttgggtcctg
3241 tatttttcca aacaactgtg cttcttcagc actaatattt ctgggattta aatagtaatg
3301 tttaaattat ggtaaatgta atttaaaaca tctcaattaa gtctgtctat caatattgtt
3361 cttcaagcat gttttagacc tagaaaagta tggtttgggg gaggctattt tattgtgtgg
3421 ttagcacaag gaatctaatt tatagcaagt gtgaaatagt taccattttt tcctgatctg
3481 tcatcttcat agcacaacaa aacgaaatga tggaaatgct cttgagctca caacatttgt
3541 ttttctttta aagtaaatgc aagtaccaaa gctcactact gcggtttgcc tgtgcctgga
3601 caatgaggcg gagccactgt tggggcaccc ccttccctcc ccgggtttgc aaatagaggc
3661 taccgggtgc tgtattcagc aacacctgtt ttactatttg ttattaaact atcatctcca
3721 ccttcctttt gattagcaat ttgtactaag aaacgaaaca atgttatttg gtggtgtata
3781 attctacttt tctagtagat tactgtgtgg aattctgtga aaaatatttg agaaaaggcc
3841 tgtattgcat aaataaattc tttgtatgtt gtg
//