LOCUS AK122888 4284 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ16538 fis, clone OCBBF2033295, highly similar
to Protein neurobeachin.
ACCESSION AK122888
VERSION AK122888.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4284)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..4284
/clone="OCBBF2033295"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000042761"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 145..3888
/codon_start=1
/note="highly similar to Protein neurobeachin"
/protein_id="BAG53781.1"
/translation="MSELLSTLSSEVKKSQESLTENPSETLKPATSISSISQTKGINV
KEILKSLVAAPVEIAECGPEPIPYPDPALKRETQAILPMQFHSFDRSVVVPVKKPPPG
SLAVTTVGATTAGSGLPTGSTSNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNG
ATSKNLPAVQTVAPMPEDSAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGS
HGQELLIEGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMK
DHIVRVANEAEFILNRQRSEDVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDH
VTANQLKQKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHA
EALLKAAIEYGTEEDVVKSKKTFRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLA
GPVVLSTPAQLIAPVVVAKGTLSITTTEIYFEVDEDDSAFKKIDTKVLAYTEGLHGKW
MFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGL
PQARRISLATPRQLYKSSNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWV
LTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWEDDQSPPYHYNTHYST
ATSTLSWLVRIEPFTTFFLNANDGKFDHPDRTFSSVARSWRTSQRDTSDVKELIPEFY
YLPEMFVNSNGYNLGVREDEVVVNDVDLPPWAKKPEDFVRINRMALESEFVSCQLHQW
IDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREAMEAQIQNFGQTPSQL
LIEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIP
AVVTVTCSRLFAVNRWHNTVGLRGAPGYSLDQAHHLPIEMDPLIANNSGVNKRQITDL
VDQSIQINAHCFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARS
ESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVS
VCAELGLVISGAKEGPCLVHTITGDLLRALEGPENCLFPRLISVSSEGHCIIYYERGR
FSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGC
DAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY"
BASE COUNT 1252 a 923 c 966 g 1143 t
ORIGIN
1 ataaaagaaa aagaaacacc aactcctggt gaagatattc aggtagaaag ttcaattccc
61 catacagatt caggaattgg agaggagcaa gtggctagca tcctgaatgg ggcagaatta
121 gaaacaagta caggccctga tgccatgagt gaactcttat ccactttgtc atccgaagtg
181 aagaaatcac aagagagctt aactgaaaat cctagtgaaa cgttgaagcc tgcaacatcc
241 atatctagca ttagtcaaac caaaggcatc aatgtgaagg aaatactgaa aagtcttgtg
301 gctgctccag ttgaaatagc agaatgtggc cctgaaccta tcccataccc agatccagca
361 ttgaagagag aaacacaagc tattcttcct atgcagtttc attcctttga caggagtgtt
421 gtggtgcctg taaagaaacc acctccaggt agtttagctg taaccactgt gggagccact
481 actgctggaa gtgggctgcc aacaggcagt acctctaata tatttgctgc tactggagct
541 acaccaaaaa gtatgattaa tacaacaggt gccgtggatt cagggtcctc ctcctcttcc
601 tcctcttcta gttttgtgaa tggtgctact agcaaaaacc ttccagctgt acaaactgtt
661 gctccaatgc cagaagattc agctgaaaat atgagcatca ctgcaaaact tgaaagagcg
721 ttagaaaaag ttgctcctct tcttcgtgaa atttttgtag actttgcccc attcctatct
781 cgtacacttc ttggcagtca tggacaagag ctattgatag aaggccttgt ttgtatgaag
841 tccagcacat ctgtggttga gcttgttatg ctgctttgtt ctcaggaatg gcaaaactct
901 attcagaaga atgcaggact tgcatttatt gagctcatca atgaaggaag attactgtgc
961 catgctatga aggaccatat agtccgtgtt gcaaatgaag ctgagtttat tttgaacaga
1021 caaagatccg aggatgtaca taaacatgca gagtttgagt cacagtgtgc ccaatatgct
1081 gctgatagaa gagaggaaga aaagatgtgt gaccatctta tcagtgctgc taaacatcga
1141 gatcatgtaa cagcaaatca gctgaaacag aagattctca atattctcac aaataaacat
1201 ggtgcttggg gagcagtttc tcatagccaa ttgcatgatt tctggcgttt ggattactgg
1261 gaagatgatc ttcgtcgaag gagacgattt gttcgcaatg catttggctc cactcatgct
1321 gaagcattgc tgaaagctgc aatagaatat ggcacggaag aagatgtagt aaagtcaaag
1381 aaaacattca gaagtcaagc aatagtgaac caaaatgcag agacagaact tatgctggaa
1441 ggagacgatg atgcagtcag tctgctacag gagaaagaaa ttgacaacct tgcaggccca
1501 gtggttctca gcacccctgc ccagctcatc gctcccgtgg tggtggccaa ggggactctc
1561 tccatcacca cgacagaaat ctacttcgag gtagatgagg atgattctgc cttcaagaag
1621 atcgacacga aagttcttgc atacactgag ggacttcacg gaaaatggat gttcagcgag
1681 atacgagctg tattttcaag acgttacctt ctacaaaaca ctgctttgga agtatttatg
1741 gcaaaccgaa cctcagttat gtttaatttc cctgatcaag caacagtaaa aaaagttgtc
1801 tatagcttgc ctcgggttgg agtagggacc agctatggtc tgccacaagc caggaggata
1861 tcattggcca ctcctcgaca gctttataaa tcttccaata tgactcagcg ctggcaaaga
1921 agggaaattt caaacttcga atatttgatg ttccttaata ctattgcagg acggacatat
1981 aatgatctga accaatatcc agtgtttccg tgggtgttaa ccaactatga atcagaagag
2041 ttggacctga ctcttccagg aaacttcagg gatctatcaa agccaattgg tgctttgaac
2101 cccaagagag ctgtgtttta tgcagagcgt tatgagacat gggaagatga tcaaagccca
2161 ccctaccatt ataataccca ttattcaaca gcaacatcta ctttatcctg gcttgttcga
2221 attgaacctt tcacaacctt cttcctcaat gcaaatgatg gaaaatttga tcatccagat
2281 cgaaccttct catccgttgc aaggtcttgg agaactagtc agagagatac ttctgatgta
2341 aaggaactaa ttccagagtt ctactaccta ccagagatgt ttgtcaacag taatggatat
2401 aatcttggag tcagagaaga tgaagtagtg gtaaatgatg ttgatcttcc cccttgggca
2461 aaaaaacctg aagactttgt gcggatcaac aggatggccc tagaaagtga atttgtttct
2521 tgccaacttc atcagtggat cgaccttata tttggctata agcagcgagg accagaagca
2581 gttcgtgctc tgaatgtttt tcactacttg acttatgaag gctctgtgaa cctggatagt
2641 atcactgatc ctgtgctcag ggaggccatg gaggcacaga tacagaactt tggacagacg
2701 ccatctcagt tgcttattga gccacatccg cctcggagct ctgccatgca cctgtgtttc
2761 cttccacaga gtccgctcat gtttaaagat cagatgcaac aggatgtgat aatggtgctg
2821 aagtttcctt caaattctcc agtaacccat gtggcagcca acactctgcc ccacttgacc
2881 atccccgcag tggtgacagt gacttgcagc cgactctttg cagtgaatag atggcacaac
2941 acagtaggcc tcagaggagc tccaggatac tccttggatc aagcccacca tcttcccatt
3001 gaaatggatc cattaatagc caataattca ggtgtaaaca aacggcagat cacagacctc
3061 gttgaccaga gtatacaaat caatgcacat tgttttgtgg taacagcaga taatcgctat
3121 attcttatct gtggattctg ggataagagc ttcagagttt attctacaga aacagggaaa
3181 ttgactcaga ttgtatttgg ccattgggat gtggtcactt gcttggccag gtccgagtca
3241 tacattggtg gggactgcta catcgtgtcc ggatctcgag atgccaccct gctgctctgg
3301 tactggagtg ggcggcacca tatcatagga gacaacccta acagcagtga ctatccggca
3361 ccaagagccg tcctcacagg ccatgaccat gaagttgtct gtgtttctgt ctgtgcagaa
3421 cttgggcttg ttatcagtgg tgctaaagag ggcccttgcc ttgtccacac catcactgga
3481 gatttgctga gagcccttga aggaccagaa aactgcttat tcccacgctt gatatctgtc
3541 tccagcgaag gccactgtat catatactat gaacgagggc gattcagtaa tttcagcatt
3601 aatgggaaac ttttggctca aatggagatc aatgattcaa cacgggccat tctcctgagc
3661 agtgacggcc agaacctggt caccggaggg gacaatgggg tagtagaggt ctggcaggcc
3721 tgtgacttca agcaactgta catttaccct ggatgtgatg ctggcattag agcaatggac
3781 ttgtcccatg accagaggac tctgatcact ggcatggctt ctggtagcat tgtagctttt
3841 aatatagatt ttaatcggtg gcattatgag catcagaaca gatactgaag ataaaggaag
3901 aaccaaaagc caagttaaag ctgagagcac aagtgctgca tggaaaggca atatctctgg
3961 tggaaaaaac tcgtctacat cgacctccgt ttgtacattc catcacaccc agcaatagct
4021 gtacattgta gtcagcaacc attttacttt gtgtgttttt tcacgactga acaccagctg
4081 ctatcaagca agcttatatc atgtaaatta tatgaattag gagatgtttt ggtaattatt
4141 tcatatattg ttgtttattg agaaaaggtt gtaggatgtg tcacaagaga cttttgacaa
4201 ttctgaggaa ccttgtgtcc agttgttaca aagtttaagc tttgaaccta acctgcatcc
4261 catttccagc ctcttttcaa gctg
//