LOCUS AK122833 3389 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ16441 fis, clone BRAMY3003205, highly similar
to TBC1 domain family member 3.
ACCESSION AK122833
VERSION AK122833.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3389)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..3389
/clone="BRAMY3003205"
/clone_lib="BRAMY3"
/db_xref="H-InvDB:HIT000042706_04"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 1666..3075
/codon_start=1
/note="highly similar to TBC1 domain family member 3"
/protein_id="BAG53751.1"
/translation="MLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKN
PGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNP
EVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQE
HVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALM
PITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGD
LQPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSST
PCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHY
DFRQSCWVRAISQEDQLAPRWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQPCAPT
SGPCLCGLHLESSQFPPGF"
BASE COUNT 700 a 1002 c 1064 g 623 t
ORIGIN
1 gtggggccca tctagggagc cggtgggaat ggagactggg ctaggtcagg cccctgggcg
61 ctcagcagtt ctgtcggcaa gtgagcacaa gaggagcggg gcagcctgag ggtctggccc
121 tgtctacttg gagacaaccc cggtgagatg caagggttat ggccacaggg tgaggggacg
181 cctggcccag cctcagggct gttgtccagc aggtctctga gggcccacct gcccctgttc
241 tcccccattc cccaggagct acagccctca ctgtcccgtg aggggaaaag gcatggtgac
301 agtgggggct gtggccctgg gagaacgggg gagaagatgg gcagggcccc gttctgggca
361 tctcacggtg aggccaggga ggcagcaggg ctcgcggcta aagacctggg tctggtgctg
421 ggaggggatc tggggccggg taagaggagc ccagccagga gcccatccct cagggatcac
481 aggatggaga gacagaggat ccctggggag gtagggcggg agggagctga cgagccgtgc
541 cacttctgaa acgcagggtg tgtggctcgg gtgcagggag aggcaggtgg atgctgggag
601 gtcagaacct gcaagggcct tggggctgtc aagtggggtg ggcccctggt gcagccagag
661 tacaccgggc aggtctcagg gcaggctccc ttgaccctgg cggggggatg tggtcactcc
721 ctgagggact cctgtcaggg cccggtcgcc caccctgggc ggcccccatc ccatctcagg
781 gctaaccttt ctcagctcca gcagaaagca ccacctcgag tccaggacgg gcagccccat
841 tgggcagcct gaccgccccc cacgccaggg gccccagtaa ccccggccag gctgtcccta
901 cactccttct tctcccaggt cctgcccctc ctgggagtca gccccacagg aaggcccttg
961 tcctcccttc cctgtgcctt ctcctgggct gagccctgag ctggaaaggg acagagccag
1021 tcctttctgg gggtcggcac ccaggctggg gccgctccag gccccgtgca gttcctcagc
1081 tctgcctggg ttcccttaca gtgagacgga gctgcctcct ctgactgcgc gggaggcgaa
1141 ggtaagagcc tgatgcgtgg aggggctggt ccagggacgt agggactggg cgggtggtca
1201 gtgaggcaga ggaagcagct ggcctgagcg gtggcgggtg agggcaacac gctgtcactg
1261 ggaggggcag cagtccctgc tggacctgac cccaggttgc tgttcacttt ggcagtttga
1321 taaaattcca aaaggagaac cacagtcctg gcttgggggt ggctgcgcgc ttgtgtcagg
1381 accccaccta gaggctggga cctaagactg gtgtgtctgt ggcctgagga tggtacatcc
1441 cggggtccca aagccagccc actggtgctc atttgctcaa aggctctcag cccttgaggt
1501 ctgcccttcc ctggctcctt ccagctggct cccaccaggg ctccagagcc caagacccag
1561 catccgcggg cggctctggg aagcctggca gctccgctaa ctccaacatg cctcatttga
1621 cagcaaattc ggcgggagat cagccgaaag agcaagcggg tggatatgct gggagactgg
1681 gagaaataca aaagcagcag aaagctcata gatcgagcgt acaagggaat gcccatgaac
1741 atccggggcc cgatgtggtc agtcctcctg aacactgagg aaatgaagtt gaaaaacccc
1801 ggaagatacc agatcatgaa ggagaagggc aagaggtcat ctgagcacat ccagcgcatc
1861 gaccgggacg taagcgggac attaaggaag catatattct tcagggatcg atacggaacc
1921 aagcagcggg aactactcca catcctcctg gcatatgagg agtataaccc ggaggtgggc
1981 tactgcaggg acctgagcca catcgccgcc ttgttcctcc tctatcttcc tgaggaggat
2041 gcattctggg cactggtgca gctgctggcc agtgagaggc actccctgca gggatttcac
2101 agcccaaatg gcgggaccgt ccaggggctc caagaccaac aggagcatgt ggtagccacg
2161 tcgcaaccca agaccatggg gcatcaggac aagaaagatc tatgtgggca gtgttccccg
2221 ttaggctgcc tcatccggat attgattgac gggatctctc tcgggctcac cctgcgcctg
2281 tgggacgtgt atctggtaga aggcgaacag gcgttgatgc cgataacaag aatcgccttt
2341 aaggttcagc agaagcgcct cacgaagacg tccaggtgtg gcccgtgggc acgtttttgc
2401 aaccggttcg ttgatacctg ggccagggat gaggacactg tgctcaagca tcttagggcc
2461 tctatgaaga aactaacaag aaagcagggg gacctgcaac ccccagccaa acccgagcaa
2521 gggtcgtcgg catccaggcc tgtgccggct tcacgtggcg ggaagaccct ctgcaagggg
2581 gacaggcagg cccctccagg cccaccagcc cggttcccgc ggcccatttg gtcagcttcc
2641 ccgccacggg cacctcgttc ttccacaccc tgtcctggtg gggctgtccg ggaagacacc
2701 taccctgtgg gcactcaggg tgtgcccagc ccggccctgg ctcagggagg acctcagggt
2761 tcctggagat tcctgcagtg gaactccatg ccccgcctcc caacggacct ggacgtagag
2821 ggcccttggt tccgccatta tgatttcaga cagagctgct gggtccgtgc catatcccag
2881 gaggaccagc tggccccccg ctggcaggct gaacaccctg cggagcgggt gagatcggct
2941 ttcgctgcac ccagcactga ttccgaccag ggcaccccct tcagagctag ggacgaacag
3001 ccgtgtgctc ccacctcagg gccttgcctc tgcggcctcc acttggaaag ttctcagttc
3061 cctccaggct tctagaagca tctgggccag ggctcatggc tggataattt ccctaggctt
3121 aacaacccaa gcaagcttcg catcctcgtt ttatttttgg ttaaacttat gaaaatgtat
3181 taagaaagag tgcagctcga gagagattca gagatggaac acaccagacc ccagatcaca
3241 aagccaacca tgcccagccc ctcccagcac ccccagcccc acgaccatcg ttctgaattc
3301 tgacgacacc gtgagcctgc ctttgtactt caaactcatg gaaggataac caccttcatg
3361 ttttgaaata aatgtttcct gttgaaatg
//