LOCUS AK122795 2264 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ16362 fis, clone THYMU2030912, highly similar
to Homo sapiens keratin 6 irs (KRT6IRS), mRNA.
ACCESSION AK122795
VERSION AK122795.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2264)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..2264
/clone="THYMU2030912"
/clone_lib="THYMU2"
/db_xref="H-InvDB:HIT000042668"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 71..1642
/codon_start=1
/note="highly similar to Homo sapiens keratin 6 irs
(KRT6IRS), mRNA"
/protein_id="BAG53733.1"
/translation="MSRQFTCKSGAAAKGGFSGCSAVLSGGSSSSFRAGSKGLSGGFG
SRSLYSLGGVRSLNVASGSGKSGGYGFGRGRASGFAGSMFGSVALGPVCPTVCPPGGI
HQVTVNESLLAPLNVELDPEIQKVRAQEREQIKALNNKFASFIDKVRFLEQQNQVLET
KWELLQQLDLNNCKNNLEPILEGYISNLRKQLETLSGDRVRLDSELRNVRDVVEDYKK
RYEEEINKRTAAENEFVLLKKDVDAAYANKVELQAKVESMDQEIKFFRCLFEAEITQI
QSHISDMSVILSMDNNRNLDLDSIIDEVRTQYEEIALKSKAEAEALYQTKFQELQLAA
GRHGDDLKNTKNEISELTRLIQRIRSEIENVKKQASNLETAIADAEQRGDNALKDARA
KLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYRKLLESEECRMSGEFPSP
VSISIISSTSGGSVYGFRPSMVSGGYVANSSNCISGVCSVRGGEGRSRGSANDYKDTL
GKGSSLSAPSKKTSR"
BASE COUNT 519 a 667 c 650 g 428 t
ORIGIN
1 acaaccagca gaaccttttg ggattttgcc ttcctccctc ctgcatctga gctttgtctc
61 caccagcaac atgagccgcc aattcacctg caagtcggga gctgccgcca aggggggctt
121 cagtggctgc tcagctgtgc tctcaggggg cagctcatcc tccttccggg cagggagcaa
181 agggctcagt gggggctttg gcagccggag cctctacagc ctggggggtg tccggagcct
241 caatgtggcc agtggcagcg ggaagagtgg aggctatgga tttggccggg gccgggccag
301 tggctttgct ggaagcatgt ttggcagtgt ggccctgggg cctgtgtgcc caactgtatg
361 cccacctgga ggcatccacc aggttaccgt caatgagagc ctcctggccc ccctcaacgt
421 ggagctggac cccgagatcc agaaagtgcg tgcccaggag cgagagcaga tcaaggctct
481 gaacaacaag ttcgcctcct tcatcgacaa ggtgcggttc ctggagcagc agaaccaggt
541 actggagacc aagtgggagc tgctgcagca gctggacctg aacaattgca agaacaacct
601 ggagcccatc ctcgagggct acatcagcaa cctgcggaag cagctggaga cgctgtctgg
661 ggacagggtg aggctggact cggagctgag gaatgtgcgg gacgtagtgg aggactacaa
721 gaagaggtat gaggaggaaa tcaacaagcg gacagcagca gagaacgagt ttgtgctgct
781 caagaaggat gtggatgctg cttacgccaa taaggtggaa ctgcaggcca aggtggaatc
841 catggaccag gagatcaagt tcttcaggtg tctctttgaa gccgagatca ctcagatcca
901 gtcccacatc agtgacatgt ctgtcatcct gtccatggac aacaaccgga acctagacct
961 ggacagcatc attgacgaag tccgcaccca gtatgaggag attgccttga agagtaaggc
1021 cgaggctgag gccctgtacc agaccaagtt ccaagagctt cagctggcag ctggcaggca
1081 tggggacgac ctcaaaaaca ccaagaatga aatctcggag ctcactcggc tcatccagag
1141 aatccgctca gagatcgaga acgtgaagaa gcaggcttcc aacctggaga cagccattgc
1201 tgatgctgag cagcggggag acaacgccct gaaggatgcc cgggccaagc tggacgagct
1261 ggagggcgcc ctgcaccagg ccaaggagga gctggcgcgg atgctgcgcg agtaccagga
1321 gctcatgagc ctgaagctgg ccctggacat ggagatcgcc acctatcgca agctactgga
1381 gagcgaggag tgcaggatgt caggagaatt tccctcccct gtcagcatct ccatcatcag
1441 cagcaccagt ggcggcagtg tctatggctt ccggcccagc atggtcagcg gtggctatgt
1501 ggccaacagc agcaactgca tctctggagt gtgcagcgtg agaggcgggg agggcaggag
1561 ccggggcagt gccaacgatt acaaagacac cctagggaag ggttccagcc tgagtgcacc
1621 ctccaagaaa accagtcggt agagaagact gccccgggcc ccgcctcatt ccatgacccg
1681 gctctggatc ccacactgta cttcccacag cccactctca gctccatctc caccctgctg
1741 gtcctgctcc catacacctg gcactggcct tggccaccca cttctcccag cctgtgtctt
1801 cctgatcctg ggaaggcctg gatgaccaag cttggtgaaa ttcctccctg tacacaccct
1861 attaactcct tggctgtggt cccccagcta caccaccagc ccaggtcctg gctgccagct
1921 ttcctcctct gcccggcctc tagcgcagtc gctaactact ctgctgggct ccctgggtct
1981 ctgcccaggg ccccgcacac actgggacct agcatagttc ctgcctatgc caggagctgg
2041 ctctgtgttt aagaaaagga ggactgaagg acaaacaacc aagagtggcc cagtccccac
2101 ccccacatct agctcagtct caaatctgag tgggaccaag tgcaattcag ggcctttttc
2161 tccactcacc tgcacccaga agcagagaaa agcaggcact gttcactttt cctttattct
2221 taatggcctt cctctgttgc aacctcaata aacagcacaa tctc
//