LOCUS AK122785 2428 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ16340 fis, clone TESTI2011575, highly similar
to HMG box-containing protein 1.
ACCESSION AK122785
VERSION AK122785.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2428)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..2428
/clone="TESTI2011575"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000042658"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 680..2224
/codon_start=1
/note="highly similar to HMG box-containing protein 1"
/protein_id="BAG53729.1"
/translation="MVWEVKTNQMPNAVQKLLLVMDKRASGMNDSLELLQCNENLPSS
PGYNSCDEHMELDDLPELQAVQSDPTQSGMYQLSSDVSHQEYPRSSWNQNTSDIPETT
YRENEVDWLTELANIATSPQSPLMQCSFYNRSSPVHIIATSKSLHSYARPPPVSSSSK
SEPAFPHHHWKEETPVRHERANSESESGIFCMSSLSDDDDLGWCNSWPSTVWHCFLKG
TRLCFHKGSNKEWQDVEDFARAEGCDNEEDLQMGIHKGYGSDGLKLLSHEESVSFGES
VLKLTFDPGTVEDGLLTVECKLDHPFYVKNKGWSSFYPSLTVVQHGIPCCEVHIGDVC
LPPGHPDAINFDDSGVFDTFKSYDFTPMDSSAVYVLSSMARQRRASLSCGGPGGQDFA
RSGFSKNCGSPGSSQLSSNSLYAKAVKNHSSGTVSATSPNKCKRPMNAFMLFAKKYRV
EYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDCWKRKRTN
SGSQQH"
BASE COUNT 734 a 474 c 583 g 637 t
ORIGIN
1 aaaaaaaaaa aaacaagccc ggagtccggg ctgcggtcac atgatggggg gaagggaggg
61 gaacgcgatg aatggcgaaa gagcgtgggg gatggacttg gcgtgaaccg ggaggcaccg
121 ctctgtgtga cccaaagagg aggcttggca ggcgattcca gtctccgcct ttcaacctat
181 gctgccaccg caggccgatt gaaacaaaac aaaacaaacc aggcgaagtg gacagccagg
241 tttttgtagc tttaaatgct gcgtgctgtc tagggtgttt cactctccgc tgtgcactct
301 acactcgagt tcattcttag ggagttttca gctacagtcg tttttagaag gagcactgac
361 agcgaggagt tttgggatgg tggttgataa ctaagacaaa gtgctgaaga aatgatagaa
421 gttgcaaaga gacgttagtg tactatactt ggtgaatgtt ggaaactgca ggacctgctg
481 tagggaagaa aaaagttcta gctggaaaga atgaggaaac caaagagctc tgcagaggga
541 gggggaagac aagacagact gcagctgtgc ttctgtggac cccaagaaca gcactgttca
601 tacacagagg atagctctga agagagatac ctgtgtagtg cagcttctaa atttcataat
661 aaagtcagag caccataaca tggtgtggga agtgaagaca aatcagatgc ctaatgcagt
721 acagaaactc ctgttggtga tggacaagag agcctcagga atgaatgact cattggagtt
781 gctgcagtgt aatgagaatt tgccatcttc acctggatat aactcctgtg atgaacacat
841 ggagcttgat gaccttcctg aacttcaggc agttcaaagt gatcctaccc aatctggcat
901 gtaccagctg agttcagatg tttcacatca agaataccca agatcatctt ggaaccaaaa
961 tacctcagac ataccagaaa ctacttaccg tgaaaatgag gtggactggc taacagaatt
1021 ggcaaatatc gcgaccagtc cacaaagtcc actgatgcag tgctcatttt acaatagatc
1081 atctcctgta cacatcatag ccactagcaa aagtttacat tcctatgcac gccctccacc
1141 agtgtcctct tcttcgaaga gtgaaccagc cttccctcat caccattgga aggaggaaac
1201 accagtaaga catgaaaggg caaatagtga gtcagaatct ggcattttct gcatgtcctc
1261 cctgtcagat gatgatgatt tgggatggtg caattcctgg ccttcaactg tctggcactg
1321 ttttttgaaa ggcacacgac tgtgctttca taagggaagc aataaggaat ggcaagatgt
1381 tgaagatttt gctagagctg aaggctgtga taatgaggaa gatcttcaaa tgggcattca
1441 caagggctat ggttctgatg gtctaaagtt gttatcacat gaagaaagtg tatcatttgg
1501 cgagtctgta ctgaagttga cttttgatcc tggtacagta gaagatggtt tacttaccgt
1561 agagtgtaag ctggaccacc ctttctatgt taaaaataaa ggttggtcat cattttatcc
1621 aagcttgact gtggtacagc atggcattcc atgttgtgaa gttcatattg gcgatgtatg
1681 tctacctcct ggacaccccg atgccattaa ttttgatgat tcaggtgttt ttgatacatt
1741 taaaagctat gacttcacac ctatggattc ttctgcagtt tatgtgttaa gtagtatggc
1801 tcgccagcgt cgtgcatctt tgtcttgtgg aggacctggt ggtcaagact ttgcaagatc
1861 tggattcagt aaaaactgtg gctcacctgg atcatcacag ctctcttcca attctttgta
1921 tgctaaagct gtcaaaaacc acagctcagg gactgtgagt gccacttctc ctaataagtg
1981 caaaagacca atgaatgcct tcatgctttt tgccaaaaaa tacagagttg aatatactca
2041 gatgtatcca gggaaagata acagagccat aagtgtgatc cttggtgaca ggtggaagaa
2101 aatgaagaat gaagagagaa gaatgtacac attagaagca aaggctttgg ctgaagaaca
2161 gaaacgttta aatcctgact gttggaagag gaaaagaacc aattcaggct cacaacaaca
2221 ttaaaccagg atgcttatgt tcttaagtct atatttgcat atacattgac tcttgatgga
2281 aagacttaag aagatcaagg tctcaccatt tgtcctcaat tcgtgtgacc ataagatact
2341 gatagcattg agtcttgaaa tgatttaata atatgagtga ggatttgctt tctccattag
2401 agcattaagc taaaactatc aacatttt
//