LOCUS AK122709 1946 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ16196 fis, clone COLON2006417, highly similar
to Homo sapiens ring finger protein 135 (RNF135), transcript
variant 1, mRNA.
ACCESSION AK122709
VERSION AK122709.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1946)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..1946
/clone="COLON2006417"
/clone_lib="COLON2"
/db_xref="H-InvDB:HIT000042582"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="colon"
CDS 475..1230
/codon_start=1
/note="highly similar to Homo sapiens ring finger protein
135 (RNF135), transcript variant 1, mRNA"
/protein_id="BAG53681.1"
/translation="MASPKLVTSDTAAGKIRDILHDLEEIQEKLQESVTWKEAPEAQM
QGELLEAPSSSSCPLPDQSHPALRRASRFAQWAIHPTFNLKSLSCSLEVSKDSRTVTV
SHRPQPYRWSCERFSTSQVLCSQALSSGKHYWEVDTRNCSHWAVGVASWEMSRDQVLG
RTMDSCCVEWKGTSQLSAWHMVKETVLGSDRPGVVGIWLNLEEGKLAFYSVDNQEKLL
YECTISASSPLYPAFWLYGLHPGNYLIIKQVKV"
BASE COUNT 448 a 517 c 514 g 467 t
ORIGIN
1 gttggccatg gcgggcctgg gcctgggctc cgccgttccc gtgtggctgg ccgaggacga
61 cctcggctgc atcatctgcc aggggctgct ggactggccc gccacgctgc cctgcggcca
121 cagcttctgc cgccactgcc gcacctgcgg aagaacacgc tactgcagga cctggccgac
181 aagtaccgcc gcgccgcacg cgagatacag gcgggctccg accctgccca ctgcccctgc
241 ccgggctcca gttccctctc cagcgcggcc gcgaggcccc ggcgccgccc ggaactgcag
301 cgggtggcag tagagaagag catcacagaa gttgctcagg agctgacaga gctggtggaa
361 catcttgtag acattgtcag aagcctgcag aatcagaggc ccctatcaga atctggacca
421 gacaacgaac tgagcatcct gggcaaggct ttttcttctg gggtggatct ttccatggct
481 tctccaaagc tggtgacttc cgacacagct gcagggaaaa tcagagatat tctccatgac
541 ctagaagaaa ttcaggaaaa attacaagaa agcgtcacct ggaaagaggc tcctgaagca
601 caaatgcagg gagaactcct ggaagccccg tcttcctcct catgcccatt gcctgaccag
661 agccaccctg cactcaggag agcttctcgg tttgctcagt gggccatcca tccaaccttt
721 aacttgaaga gcctttcctg cagcctggag gtgtccaagg attcccgtac agtgactgtg
781 tctcaccgcc cacaacccta tcgctggagc tgtgagaggt tttctaccag ccaggtctta
841 tgttcccagg ccctgtcttc tggaaagcat tactgggaag tggacactag gaattgcagc
901 cactgggcag ttggggtggc ttcctgggag atgagccgcg accaggtcct gggaaggact
961 atggactctt gttgtgtgga atggaagggg actagccagc tctctgcatg gcacatggtc
1021 aaggaaactg tccttggctc agacagacct ggggtggtgg gcatctggct gaaccttgag
1081 gagggaaagc ttgccttcta ttcagtggac aatcaggaga agcttctgta tgagtgtacc
1141 atctctgcct cctctccttt gtaccctgcc ttctggctgt atggcttaca tcctggaaat
1201 tacctgataa taaagcaagt aaaggtgtaa ggtttcctaa gggattacaa cacagtggtt
1261 tcctggtctc tctccctgtc atcaatcagg gtagtaactt gacttaagaa taccactttt
1321 tagaaaaatt acgatagaga tgggatctca ctaggttgcc caggctggtg tcgaattcct
1381 ggtctcaagc agtcctccca cctcagcctc ccaaggtgct gggattacag gtgtgagcca
1441 ccacacctgg ccaagaatac cacttttgaa gttaatcctt ttgtgtgata caggatgaac
1501 ttgggatgtt tgaaccctgg acattccaaa taaagaatag gcccctgcct ggctcctggg
1561 agataacctc taagccatta gaatatcttg cctgataaga gtgtttttgt ttacctgtgg
1621 gccttgggcc atgcagtatc agcttgacct tgcaaggtca agctgaggag actaagttag
1681 ccatgtgggc agtgaagcat gccaatgtga tcaatcccta gtaaaagccc tggacaccta
1741 ggcatgggtg agctactctg gttggtaata ctctgtgcac acatcattgt agccacacat
1801 cattgctggg agaattaagc attatcctga agactctgcc aggagaggat aattggaagt
1861 tctcttggac cttaccttat gtgcctttct tcattgctga ttttaatctg tatcctttca
1921 ctgtaataaa ctgtaactat gagtgc
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