LOCUS AK122629 2377 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ16050 fis, clone HHDPC2003820, highly similar
to Probable E3 ubiquitin-protein ligase HECTD2.
ACCESSION AK122629
VERSION AK122629.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2377)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2003) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2003)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: Reverse Proteomics Research
Institute, HRI and RAB.
FEATURES Location/Qualifiers
source 1..2377
/cell_type="dermal papilla cells (HDPC)"
/clone="HHDPC2003820"
/clone_lib="HHDPC2"
/db_xref="H-InvDB:HIT000042502"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, dermal papilla cells"
/organism="Homo sapiens"
CDS 582..1679
/codon_start=1
/note="highly similar to Probable E3 ubiquitin-protein
ligase HECTD2"
/protein_id="BAG53630.1"
/translation="MNILFLNMKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGL
DMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAV
YNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLS
HEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSI
YKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLT
IKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNCLPVAHTCF
NQLCLPPYKSKKDLKQKLIIGISNSEGFGLE"
BASE COUNT 753 a 434 c 439 g 751 t
ORIGIN
1 aatgctaaat ttgtgaatgc tgtgtatgat accttactta atactcctca agacgttcag
61 aagacagtat taaagggaat cattaacagc ctgttacgag aatggaaagg tccacgaaca
121 aaagatgatc ttagagcata ttttatactt ttacagaatc ctcagtttaa taacacatct
181 acgtatgtca tctatgctca cttgctacga cagatagcta ccttagtgga agctgaccat
241 catttcctag ttcactggtt taaaaaattg tcccagaaga ggttcaaaca attggtagag
301 agattgctgc aatttatttc tttacgcctg tttcctgcaa agcctgaaga atttccacct
361 ataacaaagt gttcctggtg gattccatca gccgctaaag tgttggcttt acttaatact
421 gcaagcaatt tagttcaccc tccccttatt ccttatactg atttctataa ttctacattg
481 gatcacattg atctcatgga agaatatcat acttggcaaa actttggaaa ctctcacagc
541 aaagtctggt ggataaagta tctcgaagac agagacctga tatgaatata ttatttctaa
601 atatgaaagt aagacggaca catctggtta gcgattcact tgatgagcta acccggaaaa
661 gagccgattt gaaaaagaag ttaaaagtta catttgtagg ggaagctggt ttggatatgg
721 gtggtttgac taaagaatgg ttccttcttc taattcgcca aatttttcat ccagattatg
781 gcatgtttac atatcacaag gattcacact gccattggtt tagcagcttt aaatgtgata
841 actattctga attccgattg gttggaattc ttatgggact agctgtttat aacagcatca
901 ccttggatat tcgtttccct ccctgctgtt acaagaaatt attgagccct cccatcattc
961 ctagtgatca aaatatacca gtaggcatct gcaatgttac cgtggacgac ttatgtcaaa
1021 ttatgcctga gttggcccat ggattaagtg aactcttatc acatgaaggc aatgttgaag
1081 aagatttcta ttcaacattt caggtttttc aagaagaatt tggaataatc aagtcctata
1141 atttaaagcc cggtggtgat aaaatttcag ttaccaatca aaatagaaaa gaatatgtac
1201 agctttatac tgacttcctt ctgaacaaat ccatctataa gcagtttgct gcattttatt
1261 atggatttca tagtgtgtgt gcttcaaatg ccctaatgct gcttcgtcca gaagaggttg
1321 aaattttggt ctgtggaagt cctgacctgg atatgcatgc tctgcagaga agtactcagt
1381 atgatggcta tgcaaaaacg gacttaacta taaaatactt ttgggatgtt gtgcttggat
1441 ttcctcttga tcttcaaaag aagttgctac attttactac agggagtgac agagtacctg
1501 taggagggat ggctgatttg aactttaaaa tctcaaagaa tgaaacttct actaactgct
1561 tacctgtggc ccatacctgc ttcaatcaac tttgccttcc cccctacaag agcaaaaagg
1621 atctgaaaca gaaattgatc attggaattt caaattcaga aggttttgga cttgagtaac
1681 ctagaagact tgaaatataa tcttttatat gtagcattca cttccctctt actgtgcctt
1741 tagccttttc atgtttctgt ctcaaaacac tttgacaaag ctcaccaact ttaaaatatt
1801 aagtttttaa aaaatcaaat atgaagtatg ttcagcaaag gcataatttt ctaaaaacac
1861 acacagaaat cgcttgagtg aggaaaagtc cacatggcag agacaggtat ggtccagttc
1921 ctcttttata tagcacttta tcattctcca caagtagttt gtcacaggca ttccactggg
1981 aaagcaaagt acagtgaaga atgaatttat ggtatagttg aacccagtgg cagattgtac
2041 actgctagca ctgctagcac acagtagcaa agcaaacagc tacattatct ttaacataag
2101 gcatgtagcc atattttcat atagtggtat acaacacagt atcattgcaa atgcagttta
2161 cagggatttt tgatatactg gcttgggacc tataagattc ttctcagcag ttgctgaaaa
2221 gcatgtaaat aactacataa tagcctgaga ataatgggat tttgatagtg ccatttattg
2281 ttaaagattt atttttacaa agtaaattca gggttttaga tgtgtacaca gcttttacaa
2341 atcaataaag atgattgtac aagagtattt tcagact
//