LOCUS AK098132 2429 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ40813 fis, clone TRACH2010505, highly similar
to Zinc finger CCHC domain-containing protein 2.
ACCESSION AK098132
VERSION AK098132.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2429)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kanehori,K., Ishibashi,T., Chiba,Y., Fujimori,K., Hiraoka,S.,
Tanai,H., Watanabe,S., Ishida,S., Ono,Y., Hotuta,T., Watanabe,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Ota,T., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A., Oshima,A.,
Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2429
/clone="TRACH2010505"
/clone_lib="TRACH2"
/db_xref="H-InvDB:HIT000022969"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 333..2279
/codon_start=1
/note="highly similar to Zinc finger CCHC
domain-containing protein 2"
/protein_id="BAG53581.1"
/translation="MQYSEQNGIVDWRKQSCTTIQHPEHCVTSADQHSAEKRSLSSIN
KKKGKPQTEKEKIKKTDNRLNSRINGIRLSTPQHAHGGTVKDVNLDIGSGHDTCGETS
SESYSSPSSPRHDGRESFESEEEKDRDTDSNSEDSGNPSTTRFTGYGSVNQTVTVKPP
VQIASLGNENGNLLEDPLNSPKYQHISFMPTLHCVMHNGAQKSEVVVPAPKPADGKTI
GMLVPSPVAISAIRESANSTPVGILGPTACTGESEKHLELLASPLPIPSTFLPHSSTP
ALHLTVQRLKLPPPQGSSESCTVNIPQQPPGSLSIASPNTAFIPIHNPGSFPGSPVAT
TDPITKSASQVVGLNQMVPQIEGNTGTVPQPTNVKVVLPAAGLSAAQPPASYPLPGSP
LAAGVLPSQNSSVLSTAATSPQPASAGISQAQATVPPAVPTHTPGPAPSPSPALTHST
AQSDSTSYISAVGNTNANGTVVPPQQMGSGPCGSCGRRCSCGTNGNLQLNSYYYPNPM
PGPMYRVPSFFTLPSICNGSYLNQAHQSNGNQLPFFLPQTPYANGLVHDPVMGSHANY
GMQQMAGFGRFYPVYPAPNVVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEAN
QQGTYRLRYAPPLPPSNDTLDSAD"
BASE COUNT 678 a 606 c 527 g 618 t
ORIGIN
1 ttgaacaaga ttgatttgct gttaggtgga agacatttga gagaacataa aaggtaattc
61 agagtttact gtgtttttga aaaattgctt aagatgtctt ctatgttgag aaatgcttag
121 aagtgcttca taccatctgt caccagtggt tatgatcata caaactagta gcatcctact
181 gttggttttt gctgcagcat ttagtgtaat aagttacttt ttcctctctt ctagatgtgt
241 tgcagcatgc cataatccac aagaagcata ctgggaaaag tcccattgtg aacaatattg
301 gtacaagttg ttctccattg gatgggctta ccatgcaata ttctgaacag aatggaattg
361 tggattggag gaagcaaagc tgtaccacca ttcaacaccc agagcactgt gtgacctcgg
421 ctgaccagca ttctgctgaa aaacggagtt tatcttcaat aaataagaag aaaggaaagc
481 cacaaacaga aaaggagaaa attaagaaaa ctgacaacag attgaatagt agaataaatg
541 gtattagact ctccactcct cagcatgccc atggtggtac tgtgaaagat gtgaatttgg
601 acattggctc tggacatgac acatgtggag aaacatcttc ggagagttac agttctccat
661 ctagtccccg acatgatgga agagaaagtt ttgaaagtga agaagagaaa gacagagaca
721 cagacagcaa ttctgaggat tctgggaatc catcaacaac taggtttaca ggttacggtt
781 ctgtcaacca gactgtcact gtcaagccac ctgttcaaat tgcttcacta ggaaatgaga
841 atggaaacct tttagaagat cccttaaact cacccaagta tcagcatatt tcttttatgc
901 caacgttaca ctgtgtcatg cacaatggtg cccagaagtc tgaagttgtc gttcctgcac
961 ccaaacccgc tgatggcaaa accataggga tgcttgttcc tagtcctgtt gctatttctg
1021 caataaggga gtctgcaaat tcaacccctg ttggaatact agggccaaca gcttgcactg
1081 gagaatcgga aaagcacctt gagttactgg cttccccttt acctattcca tcaaccttcc
1141 ttccacacag tagtactcct gctttgcatc ttacagttca gaggctaaag ttgccaccac
1201 cacagggatc ttctgagagc tgcacagtta acatcccaca acaaccaccc ggaagcctga
1261 gcatcgcatc accaaacact gcctttattc ctatccataa cccaggtagt ttcccaggct
1321 ctcctgttgc taccacggac cccatcacaa aatctgcatc ccaagtggta ggactcaatc
1381 aaatggtgcc tcaaattgag ggaaacacag ggacagtccc tcagcctacc aatgtgaagg
1441 tagttcttcc agcagctggc ctctcagctg ctcagccacc agcttcctac cccttaccag
1501 gctctcccct tgctgccggc gtgttaccca gccagaactc cagtgtgctc agcacagcag
1561 caacttctcc ccagccagcg agcgcaggta tcagccaggc ccaggcaact gttcctcctg
1621 cagttcctac ccacacccca ggccctgccc cgagcccaag ccctgccttg acacacagta
1681 ccgcgcagag tgacagcacc tcttacatca gtgctgtggg gaacacgaac gctaatggga
1741 cagtagtgcc accgcagcag atgggctcag gtccttgtgg ttcttgtggg cgaaggtgca
1801 gctgtgggac caatggaaac cttcagctaa atagttacta ttatcctaat ccaatgcctg
1861 gaccaatgta ccgagtccct tcattcttta ctctgccatc catttgcaat ggcagctacc
1921 tcaaccaagc acatcagagc aatggaaacc aacttccttt ttttctgcct cagactccat
1981 atgcaaatgg actggtacat gacccagtca tggggagcca tgccaactat ggcatgcagc
2041 agatggcagg atttgggaga ttctatcctg tatatccagc acctaacgta gttgccaaca
2101 ccagtggttc ggggcccaag aagaatggga atgtctcatg ttacaattgt ggtgtaagcg
2161 gacactatgc acaggactgt aagcagtcgt ccatggaggc caatcaacaa ggcacttaca
2221 gactgagata cgcacctccc ctcccccctt ctaatgatac gttggattct gcagactgaa
2281 acgagtaaag cttgcctact taatacactc aagtgtgggg agtcatgggg tgtggagggg
2341 agaaaaggaa aggtattttg tttctttgtc tatacatttc ctagatttct atgcagttgg
2401 gatttttcat ttctcttgta ccaatgtcc
//