LOCUS AK097839 2116 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ40520 fis, clone TESTI2046786, highly similar
to SYNDECAN-2 PRECURSOR.
ACCESSION AK097839
VERSION AK097839.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2116)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2116
/clone="TESTI2046786"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000022693"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 420..1025
/codon_start=1
/protein_id="BAG53540.1"
/translation="MRRAWILLTLGLVACVSAESRAELTSDKDMYLDNSSIEEASGVY
PIDDDDYASASGSGADEDVESPELTTSRPLPKILLTSAAPKVETTTLNIQNKIPAQTK
SPEETDKEKVHLSDSERKMDPAEEDTNVYTEKHSDSLFKRTEVLAAVIAGGVIGFLFA
IFLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA"
BASE COUNT 594 a 437 c 465 g 620 t
ORIGIN
1 agataccccc ggagctccag ccgcgcggat cgcgcgctcc cgccgctctg cccctaaact
61 tctgccgtag ctccctttca agccagcgaa tttattcctt aaaaccagaa actgaacctc
121 ggcacgggaa aggagtccgc ggaggagcaa aaccacagca gagcaagaag agcttcagag
181 agcagccttc ccggagcacc aactccgtgt cgggagtgca gaaaccaaca agtgagaggg
241 cgccgcgttc ccggggcgca gctgcgggcg gcgggagccc gagtccccga gcctgagccg
301 caatcgctgc ggtactctgc tccggattcg tgtgcgcggg ctgcgccgag cgctgggcag
361 gaggcttcgt tttgccctgg ttgcaagcag cggctgggag cagccggtcc ctggggaata
421 tgcggcgcgc gtggatcctg ctcaccttgg gcttggtggc ctgcgtgtcg gcggagtcga
481 gagcagagct gacatctgat aaagacatgt accttgacaa cagctccatt gaagaagctt
541 caggagtgta tcctattgat gacgatgact acgcttctgc gtctggctcg ggagctgatg
601 aggatgtaga gagtccagag ctgacaacat ctcgaccact tccaaagata ctgttgacta
661 gtgctgctcc aaaagtggaa accacgacgc tgaatataca gaacaagata cctgctcaga
721 caaagtcacc tgaagaaact gataaagaga aagttcacct ctctgactca gaaaggaaaa
781 tggacccagc cgaagaggat acaaatgtgt atactgagaa acactcagac agtctgttta
841 aacggacaga agtcctagca gctgtcattg ctggtggagt tattggcttt ctctttgcaa
901 tttttcttat cctgctgttg gtgtatcgca tgagaaagaa ggatgaagga agctatgacc
961 ttggagaacg caaaccatcc agtgctgctt atcagaaggc acctactaag gagttttatg
1021 cgtaaaactc caacttagtg tctctattta tgagatcact gaacttttca aaataaagct
1081 tttgcataga ataatgaaga tctttgtttt ttgttttcat taaagagcca ttctggcact
1141 ttaatgataa aatcccattg tatttaaaac atttcatgta tttctttaga acaacataaa
1201 attaaaattt aacatctgca gtgttctgtg aatagcagtg gcaaaatatt atgttatgaa
1261 aaccctcgat gttcatggaa ttggtttaaa cttttatgcg caaatacaaa atgattgtct
1321 ttttcctatg actcaaagat gaaagctgtt tcatttgtgt cagcatgtct cagattgacc
1381 ttaccaagtt ggtcttactt tgttaattta tctgttgtcc ccttcctctc ctctgccctc
1441 ccttcttgtg cccttaaaac caaaccctat gccttttgta gctgtcatgg tgcaatttgt
1501 ctttggaaaa ttcagataat ggtaatttag tgtatatgtg attttcaaat atgtaaactt
1561 taacttccac tttgtataaa tttttaagtg tcagactatc cattttacac ttgctttatt
1621 tttcattacc tgtagctttg ggcagatttg caacagcaaa ttaatgtgta aaattggatt
1681 attactacaa aaccgtttag tcatatctat ctaatcagat cttcttttgg gaggatttga
1741 tgtaagttac tgacaagcct cagcaaaccc aaagatgtta acagtatttt aagaagttgc
1801 tgcagattcc tttggccact gtatttgtta atttcttgca atttgaaggt acgagtagag
1861 gtttaaagaa aaatcagttt ttgttcttaa aaatgcattt aagttgtaaa cgtcttttta
1921 agcctttgaa gtgcctctga ttctatgtaa cttgttgcag actggtgtta atgagtatat
1981 gtaacagttt aaaaaaaaag ttggtatttt ataagcacag acaattctaa tggtaacttt
2041 tgtagtctta tgaatagaca taaattgtaa tttgggaaca taaaaactac tgaataaatc
2101 atgtggccta atattg
//