LOCUS AK097835 2879 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ40516 fis, clone TESTI2046569, highly similar
to Cdc42 effector protein 4 (Binder of RhoGTPases 4).
ACCESSION AK097835
VERSION AK097835.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2879)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2879
/clone="TESTI2046569"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000022689"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 214..1074
/codon_start=1
/note="highly similar to Cdc42 effector protein 4 (Binder
of RhoGTPases 4)"
/protein_id="BAG53539.1"
/translation="MPILKQLVSSSVHSKRRSRADLTAEMISAPLGDFRHTMHVGRAG
DAFGDTSFLNSKAAEKGTSKLPKSLSSSPVKKANDGEGGDEEAGTEEAVPRRNGAAGP
HSPDPLLDEQAFGDLTDLPVVPKATYGLKHAESIMSFHIDLGPSMLGDVLSIMDKEEW
DPEEGEGGYHGDEGAAGTITQAPPYAVAAPPLARQEGKAGPDLPSLPSHALEDEGWAA
AAPSPGSARSMGSHTTRDSSSLSSCTSGILEERSPAFRGPDRARAAVSRQPDKEFSFM
DEEEEDEIRV"
BASE COUNT 589 a 868 c 808 g 614 t
ORIGIN
1 acaaacgccg gcgctgacag gggccgccag cccctccgcc gcgcggagcc cacgaagggg
61 acagcgcagc cggcccagag ctcgggtctc cggggaccga gccttatgat ctcctcattg
121 cgtccccctc tgcccactgg acttggactt cagatctgac cccagacctg ccggctacct
181 cgggagggcc cacctccccg cccatccagc aagatgccaa tcctcaagca actggtgtcc
241 agctcggtgc actccaagcg ccgttcccga gcggacctca cggccgagat gatcagcgcc
301 ccgctgggcg acttccgcca caccatgcac gttggccggg ccggagacgc ctttggggac
361 acctccttcc tcaatagcaa ggccgcggag aagggcacca gtaagctgcc caagagcctg
421 tcatccagcc ccgtgaagaa ggccaatgac ggggagggcg gcgatgagga ggcgggcacg
481 gaggaggcag tgccccgtcg gaatggggcc gcgggtccac attcccctga ccccctcctc
541 gatgagcagg cctttgggga tctgacagat ctgcctgtcg tgcccaaggc cacgtacggg
601 ctgaagcatg cggagtccat catgtccttc cacatcgacc tggggccctc catgctgggt
661 gacgtcctca gcatcatgga caaggaggag tgggaccccg aggaggggga gggtggttac
721 catggcgatg agggcgccgc tggcaccatc acccaggctc ccccgtacgc cgtggcggcc
781 cctcccctgg caaggcagga aggcaaggct ggcccagact tgccctccct cccctcccat
841 gctctggagg atgaggggtg ggcagcagcg gcccccagcc ccggctcagc ccgcagcatg
901 ggcagccaca ccactcggga cagcagctcc ctctccagct gcacctcagg catcctggag
961 gagcgcagcc ctgccttccg ggggccggac agggcccggg ctgctgtctc aagacagcca
1021 gacaaggagt tctccttcat ggatgaggag gaggaggatg aaatccgtgt gtgaggcgga
1081 cagtgggtgg ccaccgggag ctcttggctg catcttctcc ctgcccccac cccactatga
1141 cctttgaccc tacggcgcag gggcagccag gacccttgat tcagaccatg gaccctggac
1201 cttgtagatg agggacactg gcctggccct cgggtcttcg gaggacgtag ggggctggca
1261 tgggtgccga ctggctgcct gacttcatca cgctccctgc acttaggctg cgtgggacaa
1321 gggctgtgtt gtcacagcag gaataggttt tcctctgttg gcctcccttt cctccaccct
1381 ggcctcaaat ggatgccaga tgccaacccc agttctggcc acgtacagcc agcgggtcag
1441 cccagaggca gcctcagctc cagggctaag gactctcggc tcccattttc tctgctggcg
1501 tttctgctgt gcccagcagt ggctgctggg gaagcagctg cagcaggagg gagacggtct
1561 tgcctctcag cccctccctg ccccacccca gctcctgccc tggaaatctg gagccccttg
1621 gagctgagct ggacgggggg ccagctgcga gcatgtgcac taaacgcagc cctttccagg
1681 ggaagagagc aggatggaga atggaaggaa agccccccag gcttcgtgaa ttgcaagaag
1741 ggacccttcc aggatgacac taggaacagg gctagggcac tcgctcagtc cctaggggct
1801 tgtttgttct ttattattgt gtttaaatcc ttatagagca atatcaggat ggtgttaata
1861 ggtctgcctc agaatgagaa tcaatccttt tagaaaacct ttatactaag cctcctcttc
1921 aaaattcaca gtggcgatta gcggactgga gtctggtggc gattagcgga ctggagtctg
1981 gggacatccg tggcaaagac accagctcaa ctttagtgct tcccaacttt atttagaatg
2041 acatggggtg ggtgtctggt gtgtgtgttt tccctacgca cctcccatag ctattaacaa
2101 ctgaggaagg ccagtgcaga atatttttgg agaacgattt tttttttaaa taatatatca
2161 ttcctatggg gggaaagcct tttttttctt tttggctgag ttattccctc cctcccctca
2221 ataccctcag tactgactac ttccctttct tttctcaggc ctccccccac cgacttttga
2281 ggccagggtt ggccagattt agcaaaacca aaacagagtg ctgagttaaa cgcaaatttc
2341 aggtaaacaa aagataattt tctagcatta atatgcccca cgcaatattt ggaacactta
2401 tgtgaaaaat gatttgtttt tctgaaattt acgtttctct ctgagtcctg taactgtccc
2461 cgaggggatt gagcagaagc tcgggtatga gccctgaggt tgactgccgg ttatttttct
2521 gtcctgggaa cagcctgacc cacctccctg tctccatgta gccagtgggg ggagggggag
2581 acacagaacc taccacagcc aggggcgtcc ccatggcgac tgtggcccgg cccctcctct
2641 cttgcctgac tctcctctct tgcctgactc tagacactaa cttagttcca ggttcggtgc
2701 cctgttggtg ctcctgtttc caatagctta ggtcccatgg tgggggagga acctcagggg
2761 ctatgcagcc cccgccagct gccctcaaat cccgtccagg ccagttccag attctaaact
2821 gatttttttc atgatattgt caaaacagtg aggaaacatt aaaaaaaaag ccctaaagc
//