LOCUS AK097552 3161 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ40233 fis, clone TESTI2023085, weakly similar
to CIRCADIAN LOCOMOTER OUTPUT CYCLES KAPUT PROTEIN.
ACCESSION AK097552
VERSION AK097552.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3161)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kawakami,B., Sugiyama,A., Takemoto,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K.
and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3161
/clone="TESTI2023085"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000022406"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 246..2567
/codon_start=1
/protein_id="BAC05097.1"
/translation="MKMRGEKRRDKVNPKSSQRKLNWIPSFPTYDYFNQVTLQLLDGF
MITLSTDGVIICVAENISSLLGHLPAEIVGKKLLSLLPDEEKDEVYQKIILKFPLLNS
ETHIKFCCHLKRGNVEHGDSSAYENVKFIVNVRDICNEFPVVFSGLFSSHLCADFAAC
VPQEDRLYLVGNVCILRTQLLQQLYTSKAVSDEAVLTQDSDEEPFVGELSSSQGQRGH
TSMKAVYVEPAAAAAAAAISDDQIDIAEVEQYGPQENVHMFVDSDSTYCSSTVFLDTM
PESPALSLQDFRGEPEVNPLYRADPVDLEFSVDQVDSVDQEGPMDQQDPENPVAPLDQ
AGLMDPVDPEDSVDLGAAGASAQPLQPSSPVAYDIISQELELMKKLKEQLEERTWLLH
DAIQNQQNALELMMDHLQKQPNTLRHVVIPDLQSSEAVPKKQQKQHAGQVKRPLPHPK
DVKCFCGLSLSNSLKNTGELQEPCVAFNQQQLVQQEQHLKEQQRQLREQLQQLREQRK
VQKQKKMQEKKKLQEQKMQEKKKLQEQRRQKKKKLQERKKWQGQMLQKEPEEEQQKQQ
LQEQPLKHNVIVGNERVQICLQNPRDVSVPLCNHPVRFLQAQPIVPVQRAAEQQPSGF
YQDENCGQQEDESQSFYPEAYQGPPVNQLPLIDTSNSEAISSSSIPQFPITSDSTIST
LETPQDYIRLWQELSDSLGPVVQVNTWSCDEQGTLHGQPTYHQVQVSEVGVEGPPDPQ
AFQGPAAYQPDQMRSAEQTRLMPAEQRDSNKPC"
BASE COUNT 877 a 750 c 796 g 738 t
ORIGIN
1 acgctgcctc catgcctgcc tcccctctct gccacgcccc caccacgcgc tttgcactct
61 ggggcccacg cacttccctg aagagtctag aagctgctcc tcatttccag actttccggg
121 cgcccaccag gctcccgggc tctcaccgga gaccacaggg aggagcttca aggtacccca
181 agtccctgcg gcctccagca gtgaagagtt ccacaaggga gtcttcctac gtcactgaat
241 aatgaatgaa gatgagaggg gaaaagagaa gagacaaagt caatccaaaa agctctcaaa
301 ggaaattaaa ctggattcca tcatttccta cctatgatta cttcaaccaa gtgacgctac
361 agttattaga tggctttatg attacactga gcacagatgg agtgatcatt tgtgtggctg
421 aaaacatctc ttctcttctt ggacatttac cagctgagat tgtgggcaaa aaattattaa
481 gccttctgcc tgatgaagag aaagatgaag tctaccaaaa gattattctc aaatttcctt
541 tactaaactc agaaacacat attaaatttt gctgtcattt aaaaagagga aatgtcgaac
601 atggtgatag ttctgcttac gaaaacgtga aatttattgt gaatgtaaga gatatttgta
661 atgagtttcc tgtggtcttt agtggcttgt tttccagcca cctctgtgct gactttgctg
721 catgtgttcc tcaggaggat cggctttatc ttgtggggaa tgtttgcatt ctcaggactc
781 agctcctgca gcaactttac acttcaaagg cagtcagtga tgaagctgta cttacacaag
841 attcagatga ggaacctttt gtgggagagc tcagtagctc tcaaggtcaa agaggacaca
901 ctagcatgaa agccgtgtac gttgaacccg ctgctgctgc tgctgctgct gctatctcag
961 acgaccaaat tgatattgca gaggttgagc agtatggtcc acaagaaaac gttcacatgt
1021 ttgtagattc tgattcaact tattgctcca gtacagtttt cctggatact atgcctgaat
1081 ctccagcctt atccttgcaa gactttcgag gtgagcctga ggtgaatcca ttgtacaggg
1141 cagacccagt ggacctggag ttctcggtgg atcaggtgga ctcagtggac caggagggcc
1201 caatggacca gcaggaccca gagaacccag ttgccccgtt ggaccaggca ggcctgatgg
1261 atccagtgga tccagaggac tcagtggacc tgggggctgc tggcgcaagt gctcagccat
1321 tacagccatc atcaccagtt gcatatgaca tcattagcca ggaactggaa ctgatgaaga
1381 agttgaagga gcagctagaa gagaggactt ggttgctgca tgatgccatc caaaaccagc
1441 agaatgcatt ggaattgatg atggatcacc ttcagaagca gccaaacaca ttacgccacg
1501 ttgtcattcc tgatctccaa tcttcggagg cagtgcccaa gaaacaacag aaacaacacg
1561 ctgggcaagt gaagcggcct ctcccacatc ccaaggacgt caagtgtttc tgtggtttat
1621 ctttatccaa ctctctcaaa aacactgggg agcttcagga gccttgtgtt gccttcaacc
1681 agcagcaact ggtgcagcaa gaacaacacc tgaaggagca gcagcggcag ctgcgggagc
1741 agctgcaaca gctgagagag caaaggaagg tgcagaagca gaagaagatg caggagaaga
1801 agaagctgca ggagcagaaa atgcaggaga agaagaagct gcaggagcag aggcggcaaa
1861 agaagaagaa gctacaggag cggaagaagt ggcaggggca gatgctacag aaagagccag
1921 aggaggagca gcagaagcag cagttgcaag agcagccact gaagcataat gtcatcgtgg
1981 ggaatgagag ggtgcagata tgcctgcaaa acccacgtga cgtatctgtg cccctctgca
2041 atcaccctgt tagattttta caggcccaac ccattgttcc tgtccagaga gcagctgaac
2101 aacagccctc tggcttctat caagatgaaa actgtgggca acaggaagat gagagtcaaa
2161 gtttttatcc tgaggcgtat caagggcccc ccgtgaacca gctgccattg atagatacct
2221 caaactctga ggcaatttct tcttccagca ttcctcagtt tcccataact tcagactcaa
2281 ccataagcac cctggagacc ccacaggatt acatccggct ttggcaagag ttgtctgatt
2341 cactcggtcc tgttgtccaa gtgaacactt ggtcttgcga tgagcagggc accctgcacg
2401 gccaacccac ctaccatcag gtgcaagttt ctgaggtagg agtcgaggga cctcctgatc
2461 cacaggcttt ccaaggccct gctgcatacc agccagacca gatgagatct gcggagcaga
2521 ccagattgat gcctgcagag caacgtgact caaataagcc gtgctaacag tactttcatg
2581 accagtgatg aggggaaatg gggggagggg gcaggccaat gaggtctgca tggccagggg
2641 accttcaagg tgcgtaaagt cccttggggt agggtttagt gggtagagac ttatttgttt
2701 cctgataggt tatgtttgta attgtttgtt aagcacagcc tgtttcttgg aagttatgct
2761 gtagaggcag cctgtgatcc gtagtatgct agggtttgac agcagccagc cacagctgga
2821 tctgatgtct tgtctgcccc gcccagcttt gcatatccat gttctaccac aggaaggtgg
2881 cctgccaaga gtctgctcaa agttttcaac ataaagaaaa aagaaaaaaa aatgccaaag
2941 tgcttttcaa tctagtaaat ctagagggtt gttttgtctt agccacaaga attccgaggt
3001 cttgaccctg atgatcaacc tgcctcccct ccatagtctt gttggagaag cccagagaga
3061 atgggactcc aactaaggga acctgaaatc aactcaatgg aggcacttca gagctaaaat
3121 aattatggct accttgctta ataaacattt tcgttcactg c
//