LOCUS AK097178 2557 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ39859 fis, clone SPLEN2015094, moderately
similar to Mus musculus histone deacetylase mHDA1 mRNA.
ACCESSION AK097178
VERSION AK097178.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2557)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Ota,T.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K.,
Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M.,
Murakawa,K., Kanehori,K., Takahashi-Fujii,A., Oshima,A.,
Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2557
/clone="SPLEN2015094"
/clone_lib="SPLEN2"
/db_xref="H-InvDB:HIT000022033"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS 79..2385
/codon_start=1
/protein_id="BAC04971.1"
/translation="MHNKTDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLD
LRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQL
QEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVERHRREQQLPPLRGEDRGRERAV
ASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTS
PSYKYTLPGAQDAKDDFPLRKTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTP
HAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQ
TLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAG
GVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFL
EKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSD
SSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQPFLEPTHTRALSVR
QAPLAAVGMDGLEKHRLVSRTHSSPAASVLPHPAMDRPLQPGSATGIAYDPLMLKHQC
VCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGT
NPLDGQELDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELA
SKVASGELKNGFAVVRPPGHHAEESTAM"
BASE COUNT 724 a 671 c 622 g 540 t
ORIGIN
1 aatattataa cggatacaga aaagttcaga aggactgagc tagtttgcga aaccacagca
61 cactttggca aagagggaat gcacaacaaa acggatgggg tggctggacg agagcagctc
121 ttggctcagc aaagaatgca cagtatgatc agctcagtgg atgtgaagtc agaagttcct
181 gtgggcctgg agcccatctc acctttagac ctaaggacag acctcaggat gatgatgccc
241 gtggtggacc ctgttgtccg tgagaagcaa ttgcagcagg aattacttct tatccagcag
301 cagcaacaaa tccagaagca gcttctgata gcagagtttc agaaacagca tgagaacttg
361 acacggcagc accaggctca gcttcaggag catatcaagt tgcaacagga acttctagcc
421 ataaaacagc aacaagaact cctagaaaag gagcagaaac tggagcagca gaggcaagaa
481 caggaagtag agaggcatcg cagagaacag cagcttcctc ctctcagagg cgaagataga
541 ggacgagaaa gggcagtggc aagtacagaa gtaaagcaga agcttcaaga gttcctactg
601 agtaaatcag caacgaaaga cactccaact aatggaaaaa atcattccgt gagccgccat
661 cccaagctct ggtacacggc tgcccaccac acatcattgg atcaaagctc tccacccctt
721 agtggaacat ctccatccta caagtacaca ttaccaggag cacaagatgc aaaggatgat
781 ttcccccttc gaaaaactga atcctcagtc agtagcagtt ctccaggctc tggtcccagt
841 tcaccaaaca atgggccaac tggaagtgtt actgaaaatg agacttcggt tttgccccct
901 acccctcatg ccgagcaaat ggtttcacag caacgcattc taattcatga agattccatg
961 aacctgctaa gtctttatac ctctccttct ttgcccaaca ttaccttggg gcttcccgca
1021 gtgccatccc agctcaatgc ttcgaattca ctcaaagaaa agcagaagtg tgagacgcag
1081 acgcttaggc aaggtgttcc tctgcctggg cagtatggag gcagcatccc ggcatcttcc
1141 agccaccctc atgttacttt agagggaaag ccacccaaca gcagccacca ggctctcctg
1201 cagcatttat tattgaaaga acaaatgcga cagcaaaagc ttcttgtagc tggtggagtt
1261 cccttacatc ctcagtctcc cttggcaaca aaagagagaa tttcacctgg cattagaggt
1321 acccacaaat tgccccgtca cagacccctg aaccgaaccc agtctgcacc tttgcctcag
1381 agcacgttgg ctcagctggt cattcaacag caacaccagc aattcttgga gaagcagaag
1441 caataccagc agcagatcca catgaacaaa ctgctttcga aatctattga acaactgaag
1501 caaccaggca gtcaccttga ggaagcagag gaagagcttc agggggacca ggcgatgcag
1561 gaagacagag cgccctctag tggcaacagc actaggagcg acagcagtgc ttgtgtggat
1621 gacacactgg gacaagttgg ggctgtgaag gtcaaggagg aaccagtgga cagtgatgaa
1681 gatgctcaga tccaggaaat ggaatctggg gagcaggctg cttttatgca acagcctttc
1741 ctggaaccca cgcacacacg tgcgctctct gtgcgccaag ctccgctggc tgcggttggc
1801 atggatggat tagagaaaca ccgtctcgtc tccaggactc actcttcccc tgctgcctct
1861 gttttacctc acccagcaat ggaccgcccc ctccagcctg gctctgcaac tggaattgcc
1921 tatgacccct tgatgctgaa acaccagtgc gtttgtggca attccaccac ccaccctgag
1981 catgctggac gaatacagag tatctggtca cgactgcaag aaactgggct gctaaataaa
2041 tgtgagcgaa ttcaaggtcg aaaagccagc ctggaggaaa tacagcttgt tcattctgaa
2101 catcactcac tgttgtatgg caccaacccc ctggacggac aggagctgga ccccaggata
2161 ctcctaggtg atgactctca aaagtttttt tcctcattac cttgtggtgg acttggggtg
2221 gacagtgaca ccatttggaa tgagctacac tcgtccggtg ctgcacgcat ggctgttggc
2281 tgtgtcatcg agctggcttc caaagtggcc tcaggagagc tgaagaatgg gtttgctgtt
2341 gtgaggcccc ctggccatca cgctgaagaa tccacagcca tgtaagtacc agggactgtt
2401 gcccatctcc aagcaccacg gttcctggcg gtcacctgcc ccgtgcatgt ttctgaagcc
2461 tctaattgtt agcagatgga ctgaaaaatc ttgcgaggta ctcccagaag cagatttatg
2521 gcttcagaga tcatatagca tttaaaaaaa tgctctg
//