LOCUS AK097168 2702 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ39849 fis, clone SPLEN2014711, highly similar
to Homo sapiens hect domain and RLD 6 (HERC6), transcript variant
1, mRNA.
ACCESSION AK097168
VERSION AK097168.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2702)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Ota,T.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K.,
Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M.,
Murakawa,K., Kanehori,K., Takahashi-Fujii,A., Oshima,A.,
Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2702
/clone="SPLEN2014711"
/clone_lib="SPLEN2"
/db_xref="H-InvDB:HIT000022023"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS 313..2067
/codon_start=1
/note="highly similar to Homo sapiens hect domain and RLD
6 (HERC6), transcript variant 1, mRNA"
/protein_id="BAG53428.1"
/translation="MARDTFKKLTKKEWISSMITTCLEDDLLRALPCHSPHQEALSVF
LLLPECPVMHDSKNWKNLVVPFAKAVCEMSKQSLQVLKKCWAFLQESSLNPLIQMLKA
AIISQLLHQTKTEQDHCNVKALLGMMKELHKVNKANCRLPENTFNINELSNLLNFYID
RGRQLFRDNHLIPAETPSPVIFSDFPFIFNSLSKIKLLQADSHIKMQMSEKKAYMLMH
ETILQKKDEFPPSPRFILRVRRSRLVKDALRQLSQAEATDFCKVLVVEFINEICPESG
GVSSEFFHCMFEEMTKPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNL
NVANLPFPLALYKKLLDQKPSLEDLKELSPRLGKSLQEVLDDAADDIGDALCIRFSIH
WDQNDVDLIPNGISIPVDQTNKRDYVSKYIDYIFNVSVKAVYEEFQRGFYRVCEKEIL
RHFYPEELMTAIIGNTDYDWKQFEQNSKYEQGYQKSHPTIQLFWKAFHKLTLDEKKKF
LFFLTGRDRLHARGIQKMEIVFRCPETFSERDHPTSITCHNILSLPKYSTMERMEEAL
QVAINNNRGFVSPMLTQS"
BASE COUNT 840 a 562 c 548 g 752 t
ORIGIN
1 tagctgcctg atttctgctg aagacctcgt ggatgttcaa gtcaaacaca tttttgctgg
61 aacatatgcc aactttgtga caactcatca ggatactagt tccacacgtg ctcccgggaa
121 aaccctgcca gaaataagcc gaattagcca gtccatggca gaaaaatgga tagcagtgaa
181 aagaagaagt actgaacatg aaatggctaa aagtgaaatt agaatgatat tttcatctcc
241 tgcttgtctg actgcaagtt ttttaaagaa aagaggaact ggagaacgac ttccattgat
301 gtggacttag aaatggcaag agataccttc aagaagttaa caaaaaagga atggatttct
361 tccatgataa ctacgtgtct cgaggatgat ctgctcagag ctcttccatg ccattctcca
421 caccaagaag ctttatcagt tttcctcctg ctcccagaat gtcctgtgat gcatgattct
481 aagaactgga agaacctggt ggttccattt gcaaaggctg tgtgtgaaat gagtaaacaa
541 tctttgcaag tcctaaagaa gtgttgggca tttttgcaag aatcttctct gaatccgctg
601 atccagatgc ttaaagcagc catcatctct cagctgcttc atcagactaa aaccgaacag
661 gatcactgta atgttaaagc tcttttagga atgatgaaag aactgcataa ggtaaacaaa
721 gctaactgtc gactaccaga aaatactttc aacataaatg aactctccaa cttattaaac
781 ttttatatag atagaggaag acagctcttt cgggataacc acctgatacc tgcagaaacc
841 cccagtcctg ttattttcag tgattttcca tttatcttta attcgctatc caaaattaaa
901 ttattgcaag ctgattcaca tataaagatg cagatgtcag aaaagaaagc atacatgctt
961 atgcatgaaa caattctgca aaaaaaggat gaatttcctc catcacccag atttatactt
1021 agagtcagac gaagtcgcct ggttaaagat gctctgcgtc aattaagtca agctgaagct
1081 actgacttct gcaaagtatt agtggttgaa tttattaatg aaatttgtcc tgagtctgga
1141 ggggttagtt cagagttctt ccactgtatg tttgaagaga tgaccaagcc agaatatgga
1201 atgttcatgt atcctgaaat gggttcctgc atgtggtttc ctgccaagcc taaacctgag
1261 aagaaaagat atttcctctt tggaatgctg tgtggactct ccttattcaa tttaaatgtt
1321 gctaaccttc ctttcccact ggctctgtat aaaaaacttc tggaccaaaa gccatcattg
1381 gaagatttaa aagaactcag tcctcggttg gggaagagtt tgcaagaagt tctagatgat
1441 gctgccgatg acattggaga tgcgctctgc atacgctttt ctatacactg ggaccaaaat
1501 gatgttgact taattccaaa tgggatctcc atacctgtgg accaaaccaa caagagagac
1561 tatgtttcta agtatattga ttacattttc aacgtctctg taaaagcagt ttatgaggaa
1621 tttcagagag gattttatag agtctgtgag aaggagatac ttagacattt ctaccctgaa
1681 gaactaatga cagcaatcat tggaaatact gattatgact ggaaacagtt tgaacagaat
1741 tcaaagtatg agcaaggata ccaaaaatca catcctacta tacagttgtt ttggaaggct
1801 ttccacaaac taaccttgga tgaaaagaaa aaattcctct ttttccttac aggacgtgat
1861 aggctgcatg caagaggcat acagaaaatg gaaatagtat ttcgctgtcc tgaaactttc
1921 agtgaaagag atcacccaac atcaataact tgtcataata ttctctccct ccctaagtat
1981 tctacaatgg aaagaatgga ggaagcactt caagtagcca tcaacaacaa cagaggattt
2041 gtctcaccca tgctcacaca gtcataatca cctctgagag actcagggtg ggctttctca
2101 cacttggatc cttctgttct tccttacacc taaataatac aagagattaa tgaatagtgg
2161 ttagaagtag ttgagggaga gattggggga atggggagat gatgatgatg gtcaaagggt
2221 gcaaaatctc acacaagact gaggcaggag aatagggtac agagataggg atctaaggat
2281 gacttggaca cactccctgg cactgaagag tctgaacact ggcctgtgat tggtccattc
2341 caggaccttc atttgcataa ggtatcaaac cacatcagcc tctgattggc catgggccag
2401 acctgcactc tggccaatga ttggttcatt ccaggacatt catttgcata aggagtcaaa
2461 ccacaccagt cttggattgg ctgtgagcca attcacctca gtctctaatt ggctgtgagt
2521 cagtctttca tttacatagg gtgtaaccat caagaaacct ctacagggta cttaagcccc
2581 agaagatttt gctaccaggg ctcttgagcc acttgctcta gcccactccc accctgtgga
2641 atgtactttc acttttgctg cttcactgcc ttgtgctcca ataaatccac tccttcacca
2701 cc
//