LOCUS AK096928 3442 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ39609 fis, clone SKNSH2008043.
ACCESSION AK096928
VERSION AK096928.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3442)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kawakami,B., Sugiyama,A., Takemoto,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K.
and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3442
/cell_line="SK-N-SH"
/cell_type="neuroblastoma"
/clone="SKNSH2008043"
/clone_lib="SKNSH2"
/db_xref="H-InvDB:HIT000021783"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 81..524
/codon_start=1
/protein_id="BAC04900.1"
/translation="MGKLSPGPQVQPGGAGEQRSDQPVSLSPELTSGDGGRYTEKILQ
PAGVAQLILGQGCTAVCVPGHRQGHAGSAAQVCPHPACLCVAQQLPTRAGHTHSTDRP
SHGHTDKDGFTIDTGADRMCTAFQGLCATQTQGLWASAPPRPRHT"
BASE COUNT 662 a 1023 c 1115 g 642 t
ORIGIN
1 atcaatcaac catttattga gcccagatgt ggtacagccc cagccggaga tgacccagag
61 gtggggtcgg gaggagagag atggggaagc tgagtccggg gccacaggtg cagccaggag
121 gtgcaggtga gcagcgctca gaccagcctg tcagcctcag tcctgagctt acttctggtg
181 atggagggag atatacagaa aagatcctgc agcctgcagg tgtggcacag ctgatcttgg
241 gccaaggatg cacagctgtg tgtgtgcctg gccaccggca agggcacgcg ggctcagcag
301 cacaggtgtg cccacaccct gcgtgcctgt gtgtggcgca gcagctcccg acgcgtgcag
361 gacacacaca cagcacagac agaccctccc atggccacac ggacaaagat ggcttcacta
421 tagacaccgg tgcagacagg atgtgcactg ctttccaagg cctgtgcgca acacagactc
481 agggcctgtg ggcatcagca ccgcccagac ccaggcacac gtgatcctca gccaaggtgg
541 cctgtccagt cctggtgctg ttggatggaa aggctaacct gggaggtcag gggctgtggt
601 atatcagctg ggctccctcg gacgctcctg cagaagtggc caggacctca ggaacgcacc
661 tgctcctggt cagacaggag gggctgccgt gatgcaactt gcccgtgcct ttgggtgctg
721 tgagctggct gcgtgccacg tcgtttcgag gacgcaagaa ggtgtttcca agtccagtct
781 gtccaccgac ctgaaccttt accattgaaa gaacaaaggg gtggggcccg agggaccctt
841 ccctgccgtc ccgtggtgtg tagtcaggga tgctcctgca gacacacagg tgggctctga
901 ctgccagatc gcaggggcgg tgccgtggtc ctcacctgcc atgtcactag cgtgctgacg
961 cagacaccgg cgagagctac agtgctcggc ccggcacatc ccagacaatt cctctgtaaa
1021 tgctgcagca gccagaggcc ccagcacctt gaggttaagc aaagagaagg aatagagttc
1081 tccagagccc caaggagcgg gagggtctgt cccaatggat gggctcagcc aatttcaccc
1141 tctcctcccc ctgccaacac tgcggcctgc agcctggacc tggcccgggt tgtggagggg
1201 accggggatg cagctgccac ctgctgggcg gacgtgggcc taggtggtcc tcagccctca
1261 tgacaggagc ccccgaagca ctgttgcggc accctctctg acattgggtg ggagactctg
1321 ggagccgagt gcagagccag ggcccagcac gaaggccttg ggctccagtc cgtgtgcccc
1381 acatccctac atgagtgagg gtggagggat ggtgcctctg ccacggccac ggtgccgccg
1441 tccacgtcag ctcactctca gcacaggtgc tgtgtgacgg cctcgggcca caccgcttgt
1501 tctgaggccc ctagcaggtc gggcttgtgc tggctgcaca ttggctggtg agcttggcgg
1561 gtctgtgggc acggagagac cagaacgtgc gtaacaggcc cgatgagggt gccaggctgt
1621 ggcgaccccc gagcttcaga ggagaggggc accagccggg ggccctgcac aggcagcctc
1681 aggtgcgagg agctggagcc caggccagct ggggaggggt ggggtgccgt ggctggaagt
1741 tgctgttctc agacctggtt ctgagaccct ctccaactgc atgggggggt ccaggctgga
1801 ccccagatgt gacggtgtat gtgctgggat gggagccccc tgagagcagg gcttttgtta
1861 attcaccggc aatcccacat gtctggcacg agataggtgc tcagtcagtg aaaaccacac
1921 acggggtcct ccattgtgtc caggggaggg tgggccctgc tcacagccag actcctagcc
1981 ctgggcagcc ctgctgcctg cctgctcctt ccactcctac cacctgccca ggtgggactc
2041 tgcctgcctt cctgtcccca gtgctctgta ggagtttgac cacaggtatc ctcttcatca
2101 gagagaggaa agctcacgat ctgggagaac tccaggcctg gcccagtgaa gacgtcctta
2161 tcttcagcag acattgccca gtgcaagggg aggtcagtct caggagacag tctcctggac
2221 agtggcgtgg catctgtcct aaggccttgc ctgcagcaca gggtgccaca gaggtcccct
2281 gtgacagagc ctcatggctg gggcaggcgg gggtcgcacc tgctcctgca tgaagaggca
2341 gataaagacc cacagcatgg tctctggggt cccacatccc aggtagagaa tgacccaggt
2401 cgctggcgtc tgtgccatct ctgctccact gaccactcat gggggtcctg gagatcctga
2461 caccggtggc cggggagcag cagcccaggc acaggcccca gtgcacatgc agatcccacc
2521 gtgtctgcac aaggccttgc cccaacgagg cctgggtgcc gtgtgagggc cgggacgcta
2581 acacagcgga gggtacccac gcgtgagctg ctctggggtc cctccccgtg tttcttcctg
2641 taatgaaact tgtacccaaa tgggatatgc agggttgcac tgtgcagtcg ctgtgtgttt
2701 tagggtctca tacccgtgtg cgccagcagg accacagctg tgaccggctg ctccagaaga
2761 agtgggtggg ttgagacccc accggcaggg tcactggggg tagcaggccc tctgtcagca
2821 ctgacttctg tatcatgtca gggattttta gggcggcaag ctcaggtgga caggcagttt
2881 tattctgttt cccatgtcaa gtccagcccc agactgactt tctgaggtca cagacggagc
2941 ctcaccccat ccaaggcggt gtcctggact cccactgtgc tccccagagg gcagggtgag
3001 tgcgtggcat ccttttggcg ggcgtgggtg cctctgtgga cctggcgtga ggcttctctg
3061 tttctgagtc tcctatggac catctgtctt ctgtgtggct gctgaggaat cacactgggg
3121 tggccgtgcc ggtggctgaa tgagaacagg acccccatgc tgcacagccc tgcttaacgc
3181 gggggtggcc ccagaagcgg gtgggcgagg ctgggcagca gggattggct gaaatcatat
3241 gcagagccca agaggcaggg gaaaggcggc aatttcaggg tccctttgtt cgccaggtac
3301 ctggggccca gcccgggcgg caggagggac tcagcccctc gcccaggcag gaagggtccc
3361 aagcagaggc ccctccctca ggcactcccc agcccacacc tgcagcactg ggaccaagac
3421 taataaaaca ccagcctcac gg
//