LOCUS AK096895 1239 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ39576 fis, clone SKMUS2002840, moderately
similar to Mus musculus YIP1B (Yip1b) mRNA.
ACCESSION AK096895
VERSION AK096895.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1239)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..1239
/clone="SKMUS2002840"
/clone_lib="SKMUS2"
/db_xref="H-InvDB:HIT000021750"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="skeletal muscle"
CDS 18..644
/codon_start=1
/protein_id="BAC04887.1"
/translation="MDLLKISHTKLHLLEDLSIKNKQRMSNLAQFDSDFYQSNFTIDN
QEQSGDDSNTYGNLYGSRKQQAGEQPQPASFVPSEMLMSSGYAGQFFQPASNSDYYSQ
SPYIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMEPVDGSIMNETDLTGPILFCVAL
GATLLLVMCHRKHQILMLVLSSAGFEAICINIRETVSPYIVNFLSERE"
BASE COUNT 393 a 221 c 215 g 410 t
ORIGIN
1 atgtcatctt ttcaccaatg gatttgctta aaatttctca cacaaagcta catttactgg
61 aggatctttc tataaaaaat aaacagagga tgtcaaactt ggcacaattt gactctgatt
121 tttaccaatc taattttact attgataacc aggagcagag tggtgatgac tctaatacct
181 atggaaatct ttatggatct agaaaacaac aagctggtga gcagcctcag cctgcctcct
241 ttgttccatc agagatgctc atgtcatcgg gttacgcagg acaatttttt cagccagcat
301 ccaactcaga ttattattca caatctcctt acattgacag ttttgatgaa gagcctcctt
361 tgctagaaga acttggaatc cattttgatc acatatggca aaaaactttg acagtgttaa
421 acccaatgga gccagtagat ggcagcatta tgaatgaaac ggacctcact ggacccattc
481 ttttttgcgt agccctggga gccaccttgc ttctggtaat gtgtcacagg aagcaccaga
541 ttttaatgct tgtcctttcc agtgctggct ttgaagcaat ctgtataaat ataagagaaa
601 ctgtgtcacc ttacatagtg aattttttaa gtgagagaga ataatttaac catagtgaca
661 aaaatatgct accattatgc attgcaacag ctaaaaagta taaatttaaa tagaatttca
721 aaaatcaaga agcagatcaa agcaggagat catttatgtc ttttttgtta ttaagaaaag
781 actgtaaatc tggaataatg gaaggaaaac atagatttgg gagatataag gcctacattt
841 tattttttgt tattttgtga gagttctatt gtgacactga agaagtcact tctctttggt
901 caccatcttc tttgctgtga tatatctcca gactatttct aacatcttat gaggtacaag
961 acagatctcc ttgttttggg ttaggctgct atgaaaaatt aatttgcaat gacaacctat
1021 gttttgttta ctcaacctac atatttcctc taaaatgtta gttttccacc ttttatgaag
1081 acatttgttc cctgacttca ctatatgtct tatgtatgct ttcattcttt atatctggaa
1141 gtaatgatat taagggtcac tagaaaagta aagaaaaatg tacttccacc taagtaaagt
1201 ttaaaagaca ttctagctca tagtttagga aaatgtttc
//