LOCUS AK096832 2279 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ39513 fis, clone PROST2019164, highly similar
to E3 ubiquitin ligase IBRDC2 (EC 6.3.2.-).
ACCESSION AK096832
VERSION AK096832.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2279)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2279
/clone="PROST2019164"
/clone_lib="PROST2"
/db_xref="H-InvDB:HIT000021687"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="prostate"
CDS 318..1229
/codon_start=1
/note="highly similar to E3 ubiquitin ligase IBRDC2 (EC
6.3.2.-)"
/protein_id="BAG53370.1"
/translation="MGSAGRLHYLAMTAENPTPGDLAPAPLITCKLCLCEQSLDKMTT
LQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEAEIACLVPVDQFQL
YQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVECPSCHLKFCSCCKDAW
HAEVSCRDSQPIVLPTEHRALFGTDAEAPIKQCPVCRVYIERNEGCAQMMCKNCKHTF
CWYCLQNLDNDIFLRHYDKGPCRNKLGHSRASVMWNRTQVVGILVGLGIIALVTSPLL
LLASPCIICCVCKSCRGKKKKHDPSTT"
BASE COUNT 577 a 550 c 586 g 566 t
ORIGIN
1 gagctgtgcc ccacgctccc gctgcaacag tcccgggcat cgcagctgcc agtcaaggct
61 aggaggcggt cggggactcc gcctcctccc gacccgtagg tctgggagcg cgagtcctgt
121 tgcagtcttg caaagtgtaa agctgtcagc cgcagagcac ggaggaaaga cggagagaat
181 ggaagagctc ctgtccggtg tgccagcagc ccggactggc ggtgagcgcg agggaggcta
241 ctgagaagcc cggcgacgga ggaacgcagg tctgctgcca gggattgagg agactgaaga
301 acgctgaaga caggctgatg ggctcagctg gtaggctcca ctatctcgcc atgactgctg
361 aaaatcccac tcctggagac ctggctccgg cccccctcat cacttgcaaa ctctgcctgt
421 gtgagcagtc tctggacaag atgaccacac tccaggaatg ccagtgcatc ttttgcacag
481 cttgcctgaa acagtacatg cagctggcaa tccgagaagg atgtgggtct cccatcactt
541 gccctgacat ggtgtgccta aaccacggga ccctgcagga agctgagatt gcctgtttgg
601 tacctgtgga ccagtttcaa ctttatcaga ggttaaaatt tgaaagagaa gttcatctgg
661 acccctaccg aacatggtgt cctgttgcag actgtcagac agtgtgccct gttgcctcga
721 gtgacccagg acagcctgtg ctggtggaat gcccttcttg ccacctgaaa ttctgctcgt
781 gttgcaagga tgcttggcat gcagaggtct cctgtagaga cagtcagcct attgtcctgc
841 caacagagca ccgagccctc tttgggacag atgcagaagc ccccattaag cagtgcccag
901 tttgccgggt ttatatcgaa cgcaatgaag gctgcgctca gatgatgtgc aaaaactgca
961 agcatacatt ttgctggtac tgcctccaga acttggataa tgacattttc ctcagacatt
1021 atgacaaagg gccatgcagg aataaacttg gccactcaag agcatcagtg atgtggaacc
1081 gaacacaggt ggtggggatt ctcgtaggct tgggcatcat tgccttggtt acttcaccct
1141 tgttactcct ggcctcccca tgtataatct gttgtgtctg caagtcctgt cggggcaaga
1201 agaaaaagca cgacccatcc acaacctaaa gatctctgtg ttcatacgcc ccagatatgt
1261 gagttacatg agatggcaca gtgataaagc cccatttagt gaccttgcct ccttctcctt
1321 gccaactttg aaagtgcctc cgtgtccaga ctttgaactt gcctgccagc cttcagcatc
1381 aggaaaggcc aagtcctggg tgtgagtgtt cctgtgtaac aagaactggg ctcaacggtc
1441 cagctgtttc tatggagctt tggggttcct tgagatgaat gaacatatca ttttatcatc
1501 caaaggatct cactggactg ttcaacttcc agccaaattc aaggagcttg cgggaacatt
1561 tgatataaca aatgtgttgt cattgttggc aacatacaag ataaccaaga agctggagtc
1621 tgttctgtgt tgatttgact gccatgagaa acacagggga aacctgatga ggagaaggat
1681 aagactgcgt aaggagaaat cctcatagga gctataaagc aggctactga tctcagcagt
1741 tgatatggtg gttgtgcctc tgctggctac tgggtgtgct gtccccatgt tcccgctgtg
1801 atttggcaga aacacaatag gcttctcctt gtgtgatctc agcttcaagc aggtgaaact
1861 gctgtgcaga gggagttgcc ccttcccagt aaaagagttg cagcctgtta aacaatgtgg
1921 tctaatttag tgtctctccc ttggcaaatg taagttttct aagttggcca acttgtctct
1981 tacagccagt ggctgtggtc tacagaattg tttcatataa aatacgggta gagtggtaga
2041 gtttcaaaac tttcgtcata gatatctggg acctttctca ggatctgtgt tcacacagcc
2101 aatagatttg gaatcaggcc taagagtaca catggagggt aaatattaaa gtgcgtatta
2161 tgtacatcta gaatccatgt gacttgcagc ctacctgtaa tttctatcca ttgagcatgc
2221 atggatatac ccaatagtac acacaaaata aatgtttact taagagccaa aaaaaaaag
//