LOCUS AK096696 3022 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ39377 fis, clone PERIC2000180, highly similar
to Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26
(DDX26), mRNA.
ACCESSION AK096696
VERSION AK096696.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3022)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3022
/clone="PERIC2000180"
/clone_lib="PERIC2"
/db_xref="H-InvDB:HIT000021551"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="pericardium"
CDS 369..2498
/codon_start=1
/note="highly similar to Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 26 (DDX26), mRNA"
/protein_id="BAG53352.1"
/translation="MSVESEQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLES
LVQKVQSGVVINFEKAGPDPSPVEDGQPDISRPFGSQPWHSCHKLIYVRPNPKTGVPI
GHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPLTQFI
LERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDL
FKVHKAKPTLKWRQSFESYLKTMPPYYLGPLKKAVRMMGAPNLIADSMEYGLSYSVIS
YLKKLSQQAKIESDRVIGSVGKKVVQETGIKVRSRSHGLSMAYRKDFQQLLQGISEDV
PHRLLDLNMKEYTGFQVALLNKDLKPQTFRNAYDIPRRNLLDHLTRMRSNLLKSTRRF
LKGQDEDQVHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMI
DEADEFVAGPQNKHKRPGEPNMQGIPKRRRCMSPLLRGRQQNPVVNNHIGGKGPPAPT
TQAQPDLIKPLPLHKISETTNDSIIHDVVENHVADQLSSDITPNAMDTEFSASSPASL
LERPTNHMEALGHDHLGTNDLTVGGFLENHEEPRDKEQCAEENIPASSLNKGKKLMHC
RSHEEVNTELKAQIMKEIRKPGRKYERIFTLLKHVQGSLQTRLIFLQNVIKEASRFKK
RMLIEQLENFLDEIHRRANQINHINSN"
BASE COUNT 976 a 590 c 592 g 864 t
ORIGIN
1 gttttgtttg ttgtggtttt gatgtttttt ttcctttcag ctaaaggagc agcccagtgg
61 ttttcaagaa gtgctaaagt gcactgactg tctcatgatg actggtgcct cagggagggt
121 catgattcct ggatacagga tcgacctgat cctggatgtc acttcaagca gtcagatcgt
181 ggggaaaagc cttgtctaat ggctagcctt cctcaaaagt ctgatgctag tcatctcgga
241 aggcctcaga aaaagcctta aagcttcatt tacctcttaa ttctcctttg cctggaagtg
301 aattgaccaa ggaacctttt cgttgggatc agagactctt tgcattagtg ttgcggttgc
361 ctggcaccat gtcagtagaa tcagaacagt tgacaggtgt gcctttagat gactctgcaa
421 tcacaccaat gtgtgaagtg acaggcggcc gttcatattc tgtgtgttct ccaagaatgc
481 ttaatcagtg tctggagtcc ttggtgcaga aagtacaaag tggggtggta ataaactttg
541 aaaaagcagg accagatcct tcccctgtag aagatgggca gccagatata tcaaggcctt
601 ttggatctca gccttggcat agctgtcaca aactcatata tgtcagacca aatcctaaaa
661 ctggggttcc tataggtcat tggcctgttc cagagtcttt ttggccagat caaaattcgc
721 caacactacc acctcgtaca tctcatcctg tagtgaagtt ttcctgtaca gactgtgaac
781 caatggttat tgataaactt ccttttgaca aatatgagtt ggaaccttca ccactgactc
841 aatttatcct ggaaaggaaa tctcctcaaa catgttggca ggtgtacgtg agcaatagtg
901 caaaatacag tgaacttggt catccttttg gttacttgaa agccagtaca gcactgaact
961 gtgtcaactt atttgtgatg ccttacaatt atccagtcct tcttcccctc ttagatgact
1021 tgtttaaagt gcataaagca aaaccaacct tgaagtggag acagtcattt gaaagttatt
1081 tgaagacaat gcctccctac tatcttgggc ccttgaagaa agctgttagg atgatgggag
1141 cacctaacct aatagcagac agtatggaat atggacttag ttacagtgtc atttcatacc
1201 tcaaaaaact gagtcaacag gccaaaatag aatctgatcg agtcattgga tctgtaggca
1261 aaaaagtagt acaggagact ggaataaaag tccggagccg atcacatggt ttatcaatgg
1321 catataggaa agattttcaa caactcctcc agggaatttc agaggatgtc cctcacagac
1381 tgctagacct taatatgaag gaatacactg ggttccaagt tgctttgctg aataaggatt
1441 tgaagccaca gacatttaga aatgcttatg acataccaag acgaaatctt ttggatcact
1501 taacaagaat gagatctaat cttttgaaga gcactcgcag atttctgaaa ggacaggacg
1561 aagatcaagt gcacagtgtt cctatagcac aaatggggaa ctaccaggaa tacctcaagc
1621 aagtaccttc tccactaaga gaacttgatc ctgatcagcc acgaaggttg catacatttg
1681 gcaacccctt taagctggat aagaagggta tgatgataga tgaagcagat gaatttgtgg
1741 ctggacctca aaataaacat aaacgacccg gagaaccaaa tatgcaaggg atccctaaaa
1801 gacgtcggtg tatgtctcca ctactaagag gcagacagca gaatcctgtt gtaaacaatc
1861 atattggggg aaaaggacca cctgcaccta caactcaagc acagccagat cttattaaac
1921 ctcttcctct tcataaaatt tcagaaacca ctaatgattc gataatacat gatgtggttg
1981 aaaatcatgt tgcagaccaa ctttcatcag acattacacc aaatgctatg gatacggaat
2041 tttcagcatc ttctccagcc agtttactgg aacggccaac caatcatatg gaggctcttg
2101 gtcatgacca tttaggaacc aatgacctca ctgttggtgg atttttagaa aatcatgagg
2161 agccaagaga taaagaacaa tgtgctgaag agaacatacc agcatcttca ctcaacaaag
2221 gaaagaaatt gatgcattgc agaagccatg aagaggtcaa tactgaacta aaagcacaaa
2281 taatgaaaga gatccgaaag ccaggaagaa aatatgaaag aatcttcact ttactgaagc
2341 atgtgcaagg cagtttacaa acaagactaa tatttttaca aaatgtcatt aaagaagcat
2401 cgaggtttaa aaaacgaatg ctaatagaac aactggagaa cttcttggat gaaattcatc
2461 gaagagccaa tcagatcaac catattaata gcaattaaaa gaaaatagaa tgtggccact
2521 tatttcacta tcttcttcaa atacaaagta aatacaagac tgttgtgatc ttgcattcat
2581 tttctgacat gcattgttgg ctatttgaaa tactaaaagc aaatctacag atcctttttc
2641 catcatttta cagtgacctt ttcttcattt tggtttattt ttgtaatgtg aaaagtatca
2701 ctctaaaaaa catttttaat ttaacaaact aaaaatattc ctccaaatct cttgcttgtc
2761 attgactctt gcgtgtcaat ttccctcagg ttctattttc ttaaaccaac ctttaaaatt
2821 gtcacctctg ttaaggttga actttgccaa aaaaaaaaga agttactttg taatttttgg
2881 ggaaaaaagc acatacatta aaactaggta atgttttgta tatacagtta ttttggatat
2941 attattgtaa gttgtacaaa tgtattttga agaatattta agaaaagcac ttttgttatt
3001 ccatcaataa atgctctatt tt
//