LOCUS AK096347 4211 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ39028 fis, clone NT2RP7006395, highly similar
to Homo sapiens pleckstrin homology domain containing, family G
(with RhoGef domain) member 5, transcript variant 1, mRNA.
ACCESSION AK096347
VERSION AK096347.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4211)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..4211
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7006395"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000021202"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 499..3750
/codon_start=1
/note="highly similar to Homo sapiens pleckstrin homology
domain containing, family G (with RhoGef domain) member
5, transcript variant 1, mRNA"
/protein_id="BAG53269.1"
/translation="MNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKG
RAAKVCHHADCQQLHRRGPLNLCEACDSKFHSTMHYDGHVRFDLPPQGSVLARNVSTR
SCPPRTSPAVDLEEEEEESSVDGKGDRKSTGLKLSKKKARRRHTDDPSKECFTLKFDL
NVDIETEIVPAMKKKSLGEVLLPVFERKGIALGKVDIYLDQSNTPLSLTFEAYRFGGH
YLRVKAPAKPGDEGKVEQGMKDSKSLSLPILRPAGTGPPALERVDAQSRRESLDILAP
GRRRKNMSEFLGEASIPGQEPPTPSSCSLPSGSSGSTNTGDSWKNRAASRFSGFFSSG
PSTSAFGREVDKMEQLEGKLHTYSLFGLPRLPRGLRFDHDSWEEEYDEDEDEDNACLR
LEDSWRELIDGHEKLTRRQCHQQEAVWELLHTEASYIRKLRVIINLFLCCLLNLQESG
LLCEVEAERLFSNIPEIAQLHRRLWASVMAPVLEKARRTRALLQPGDFLKGFKMFGSL
FKPYIRYCMEEEGCMEYMRGLLRDNDLFRAYITWAEKHPQCQRLKLSDMLAKPHQRLT
KYPLLLKSVLRKTEEPRAKEAVVATIGSVERFIHHVNACMRQRQERQRLAAVVSRIDA
YEVVESSSDEVDKLLKEFLHLDLTAPIPGASPEETRQLLLEGSLRMKEGKDSKMDVYC
FLFTDLLLVTKAVKKAERTRVIRPPLLVDKIVCRELRDPGSFLLIYLNEFHSAVGAYT
FQASGQALCRGWVDTIYNAQNQLQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEE
EEGEDSGTSAASSPTIMRKSSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEFDSGP
FSSQSDETSLSTTASSATPTSELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPMA
ELVPRAPESPRVPSPPPSPRLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGTP
SAPSRSLSGLCLAVPAPGIRTQGSPQEAGPSWDCRGAPSPGSGPGLVGCLAGEPAGSH
RKRCGDLPSGASPRVQPEPPPGVSAQHRKLTLAQLYRIRTTLLLNSTLTASEV"
BASE COUNT 867 a 1307 c 1327 g 710 t
ORIGIN
1 aaactaaggc cttcctggta gccaaggagc ccagcagagg ggctgctgct ggctgctggg
61 attgcagagg ccggggtctc tgtggtgttg ctttcctgga aaggagggac ggcacctcca
121 gggcagccag cagtgtggga gcccattcca gggcgcaaat gggcactcag gaatggaaaa
181 tccaagaagg aaccaaccac caacaaggaa atgcagtgtg agcggcagct gcgaagtctg
241 tgccttcaaa tatacagcgc ccaggggacc tgtgttggac ggggagcaaa ttggcagggc
301 tgagagcgcc ttggttttct gtgcagacag gtccagctgc agaaattaag actggggctg
361 agtcggggag aagccttcca tgttgagatg gcaactgggc aaagcaggac ggagacctgt
421 gtgtctgatt agagaggcct gtggcattgg catgtggctg gaagtccagg cagggtgcca
481 ccaccgcaga ggtcaagcat gaattcagtc ctgacaaaac atgggtctcc acctcgaagc
541 tggctcagcc tttgttcagg aaccgacgac cagagccccg ctgaaaagaa gggactgcgc
601 tgtcagaacc ccgcctgcat ggacaagggg cgggcggcca aggtatgtca ccacgccgac
661 tgccagcagc tgcaccgccg ggggcccctc aacctctgcg aggcctgtga cagcaagttc
721 cacagcacca tgcattatga tgggcatgtc cgcttcgacc ttcccccaca aggctctgtg
781 ctggcccgga acgtgtccac ccggtcatgc ccgccgcgca ccagccccgc agtggacttg
841 gaggaggagg aggaggagag ctctgtggat ggcaaagggg accggaagag cacaggcctg
901 aaactctcca agaagaaagc aaggaggaga cacacggatg acccaagcaa ggaatgcttc
961 actctgaaat ttgacctgaa tgtggacatt gagacagaga tcgtcccagc catgaagaag
1021 aagtcactgg gggaggtgct gctgcctgta tttgaaagga agggcattgc gctgggcaaa
1081 gtggacatct acctggacca gtccaacaca cccctgtccc tcaccttcga ggcctacagg
1141 ttcgggggac actaccttcg tgtcaaagcc ccagccaagc ctggagatga gggcaaggtg
1201 gagcagggca tgaaggactc caagtccctg agtttgccga ttctgcggcc agctgggacc
1261 gggccccccg ccctggagcg tgtggacgcc cagagccgcc gggagagcct ggacatcttg
1321 gcccctggcc gccgccgcaa gaacatgtcg gagttcctgg gggaggcgag catccccggg
1381 caggagcccc ccacgccctc cagctgctct ctgcccagcg gcagcagtgg cagcaccaac
1441 actggcgaca gctggaagaa ccgggcggcc agtcgcttca gcggcttttt cagctccggc
1501 cccagcacca gcgcctttgg ccgggaggta gacaagatgg agcagctgga gggcaagctg
1561 cacacctaca gcctcttcgg gctgcccagg ctgccccggg ggctgcgctt cgaccatgac
1621 tcctgggagg aggagtacga tgaagacgag gatgaggaca atgcctgcct gaggctggag
1681 gacagctggc gggagctcat tgatgggcat gagaagctga cccggcggca gtgccaccag
1741 caggaggcgg tgtgggagct gctgcacacg gaggcctcct acatcaggaa actgcgggtg
1801 atcatcaacc tgttcctgtg ctgcctcctg aacctgcaag agtcagggct gctgtgtgag
1861 gtggaggcgg agcgcctgtt cagcaacatc ccggagatcg cgcagctgca ccgcaggctg
1921 tgggctagcg tgatggcgcc ggtgctggag aaggcgcggc gcacgcgagc gctgctacag
1981 cccggggact tcctcaaagg cttcaagatg ttcggctcgc tcttcaagcc ctacatccgc
2041 tactgcatgg aggaggaggg ctgcatggag tacatgcgcg gcctgctgcg cgacaacgac
2101 ctcttccggg cctacatcac gtgggcggag aagcacccac agtgccagag gctgaagctg
2161 agcgacatgc tggccaaacc ccaccagcgg ctcaccaagt acccgctgct gctcaagtcg
2221 gtgctgagga agaccgagga gccgcgcgcc aaggaggccg tcgtcgccac gatcggctcc
2281 gtggagcgct tcatccacca cgtgaacgcg tgcatgcggc agcggcagga gcggcagcgg
2341 ctggcggccg tggtgagccg catcgacgcc tacgaggtgg tggaaagcag cagcgacgaa
2401 gtggacaagc tcctgaagga atttctgcac ctggacttga cagcgcccat ccctggcgcc
2461 tccccggagg agacgcggca gctgctgctg gaggggagcc tgaggatgaa ggaggggaag
2521 gacagcaaga tggatgtgta ctgcttcctc ttcacggatc tgctgttggt gaccaaagca
2581 gtgaagaagg cagagaggac cagggtcatc aggccacccc tgctcgtgga caagattgtg
2641 tgccgggagc tacgggaccc tgggtccttc ctccttatct acctgaatga gtttcacagt
2701 gctgtagggg cctacacgtt ccaggccagt ggccaggcct tgtgccgtgg ctgggtggac
2761 accatttaca atgcccagaa ccagctgcaa cagctgcgtg cacaggagcc cccaggcagt
2821 cagcagcccc tgcagagcct ggaagaggag gaggatgagc aggaggagga agaggaggag
2881 gaggaggagg aggaggaagg cgaggacagt ggcacttcag ctgccagctc ccctaccatc
2941 atgcggaaaa gcagcggcag ccccgactct cagcactgtg cctcagatgg ctccacggag
3001 accctggcca tggttgtggt agagcctggg gacacgctgt cctcccccga gttcgacagc
3061 ggtcctttca gctcccagtc tgatgagacc tctctcagca ccactgcctc atctgccacg
3121 cccaccagtg agctgctgcc cctgggtccg gtggacggcc gctcctgctc catggactct
3181 gcctacggca ccctctcccc aacctcctta caagactttg tggccccagg cccaatggca
3241 gagctagtgc ctcgggcccc agagtcccca cgagttcctt cccctccacc ctcgccccgt
3301 ctccgccgcc gcacccctgt ccagctgttg agctgcccgc cccacctgct caagtctaag
3361 tccgaggcca gcctcctcca gctgctggca ggggctggca cccatgggac accctctgcc
3421 cccagccgca gcctgtcagg gctctgcctg gctgttccag ccccaggtat taggactcag
3481 ggctcccctc aggaagctgg gcccagctgg gattgccgag gggcccctag ccctggcagc
3541 ggtcctgggc tagtcggctg cctggccggg gaacctgcag gctcccacag gaagaggtgt
3601 ggagacctgc cctcgggggc ctctcccagg gtccagcctg agcccccacc aggggtctct
3661 gcccagcaca ggaagctgac cctggcccag ctctaccgaa tcaggaccac cctgctgctt
3721 aactccacgc tcactgcctc ggaggtctga gcagagggag gcccccaaga gtgccattga
3781 ccaagagaca gcagacagcc tgcctcctgg ggcgtgccgg cacctgcttc agctactgcc
3841 tcctgtatgc atgagccgga tgctgggcag gatccctgcc tacgcccggg cccgatttgc
3901 gctttgccgg actggatgga gtggaggagg cccaggccac agtaccaccc cacctgccca
3961 ggcagcccct cgtcacctac tccccgaagt taccagctca gctcgagtct tcagggctgg
4021 gctcctaggc tgcccatcct acttctaccc tcactggcct ccagtgggat tcactcctgc
4081 cctgccccca ccttcccagt cccacaggcc acccctggct tgggctgggt tctgtgaagt
4141 tacgtattta ttgagctttt ggttctttta taaagacttg tctagactcc aaaaaaaaaa
4201 aaaaaaaaaa g
//