LOCUS AK096345 4521 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ39026 fis, clone NT2RP7005675.
ACCESSION AK096345
VERSION AK096345.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4521)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..4521
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7005675"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000021200"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 177..3578
/codon_start=1
/protein_id="BAG53267.1"
/translation="MSPTQWDFPVELCCRPMAFVTLTGLDVVYNAVHRAVWDAFCANR
RADRVPISFKVLPGDHEYPKYRPKRTSYEWYIPKGILKTGWMNKHLNLVPALVVVFYE
LDWDEPQWKEKQSECATRVEIVRQSLQGRSTKVAVVLIQKKTPLPPGEDVIASERAAA
LCNACELSGKSLFVLPHTDHLVGYIIRLENAFYEHAQTYYYTEIRRVKSHKEFLNKTT
HQLLFVRHQFKIAFFSELKQDTQNALKNYRTAYNLVHELRAHETNILEIKTMAGFINY
KICRLCFQHNTPLDAIAQFRKHIDLCKKKIGSAELSFEHDAWMSKQFQAFGDLFDEAI
KLGLTAIQTQNPGFYYQQAAYYAQERKQLAKTLCNHEASVMYPNPDPLETQTGVLDFY
GQRSWRQGILSFDLSDPEKEKVGILAIQLKERNVVHSEIIITLLSNAVAQFKKYKCPR
MKSHLMVQMGEEYYYAKDYTKALKLLDYVMCDYRSEGWWTLLTSVLTTALKCSYLMAQ
LKDYITYSLELLGRASTLKDDQKSRIEKNLINVLMNESPDPEPDCDILAVKTAQKLWA
DRISLAGSNIFTIGVQDFVPFVQCKAKFHAPSFHVDVPVQFDIYLKADCPHPIRFSKL
CVSFNNQEYNQFCVIEEASKANEVLENLTQGKMCLVPGKTRKLLFKFVAKTEDVGKKI
EITSVDLALGNETGRCVVLNWQGGGGDAASSQEALQAARSFKRRPKLPDNEVHWDSII
IQASTMIISRVPNISVHLLHEPPALTNEMYCLVVTVQSHEKTQIRDVKLTAGLKPGQD
ANLTQKTHVTLHGTELCDESYPALLTDIPVGDLHPGEQLEKMLYVRCGTVGSRMFLVY
VSYLINTTVEEKEIVCKCHKDETVTIETVFPFDVAVKFVSTKFEHLERVYADIPFLLM
TDLLSASPWALTIVSSELQLAPSMTTVDQLESQVDNVILQTGESASKCFCLQCPSLGN
IEGGVATGHYIISWKRTSAMENIPIITTVITLPHVIVENIPLHVNADLPSFGRVRESL
PVKYHLQNKTDLVQDVEISVEPSDAFMFSGLKQIRLRILPGTEQEMLYNFYPLMAGYQ
QLPSLNINLLRFPNFTNQLLRRFIPTSIFVKPQGRLMDDTSIAAA"
BASE COUNT 1348 a 900 c 993 g 1280 t
ORIGIN
1 gggtacaggg aagtctcgcc tgttggaact ggctgtgggg ctgcggcggt ggggacgggc
61 cacggcgttc tgtgacatcc ccccgcctcc cctcgtcttc tcccggctgg cggcgaccgg
121 cctcagctgc agcgggcccg gggcgtgggg cctgggtttt ttgtgacatc gtaaacatga
181 gccccacaca gtgggacttc cctgtggaat tatgttgccg gcctatggcc tttgttactc
241 taacgggcct ggatgtagtt tataatgcag tccatcgagc tgtctgggac gccttctgtg
301 caaatcggag agctgatcga gtaccaattt ctttcaaggt gctcccaggt gaccatgagt
361 atcccaaata tagacccaag agaacttcat atgagtggta cattcctaaa gggatcttaa
421 agactggctg gatgaataag catctgaatc tggtgccagc cctggtggtt gtgttctatg
481 aactggactg ggatgagcct cagtggaaag aaaagcagtc tgagtgcgcc accagagtgg
541 aaatagtcag gcaaagttta caaggaagaa gcacaaaagt tgcagtggtt ctgattcaga
601 agaaaacccc tttgccccca ggagaagatg tcattgcttc agaaagggct gcagctttat
661 gcaatgcatg tgaactctca ggaaagtctt tgtttgtact gccgcacact gaccaccttg
721 tgggttatat tataagattg gaaaatgcct tttatgaaca tgcacagact tattactaca
781 ctgagatcag aagagtgaaa tctcataaag aatttttgaa taaaacaaca caccagcttt
841 tatttgttag gcatcagttc aaaatagctt tcttcagtga gttgaaacaa gatacacaaa
901 atgcgctgaa gaattatagg accgcctata atcttgtaca cgaattgaga gcccatgaaa
961 ctaatattct ggaaattaag actatggcag gatttataaa ctacaagatc tgtaggctgt
1021 gttttcaaca caacacccca ttggatgcaa ttgctcagtt ccgaaaacac atcgacttgt
1081 gtaagaaaaa gattggaagt gcagagctgt cttttgagca tgatgcatgg atgtctaaac
1141 aattccaggc ctttggagat ttatttgatg aagctattaa gttagggtta acagctattc
1201 aaactcagaa tcctggtttc tattaccagc aggcagcata ctatgcccag gagcggaaac
1261 agcttgcaaa aaccctctgt aaccacgaag cttctgtaat gtatcccaat cctgatccct
1321 tagaaacaca aacaggcgtt cttgactttt atggacaaag atcatggcga caaggaatac
1381 taagttttga tctttctgat cctgaaaaag aaaaggtggg aattcttgcc attcagctga
1441 aggagagaaa tgttgttcac tctgagataa tcataactct tctgagcaat gctgttgcac
1501 agttcaagaa gtataagtgc ccgcgaatga aaagtcacct aatggttcag atgggagagg
1561 aatattatta cgcaaaggat tataccaaag ctttgaagtt gctggattat gtgatgtgtg
1621 attatcggag tgaaggatgg tggactctgc tcacttctgt attaactaca gctctgaagt
1681 gctcctacct catggcccaa ttaaaggatt acattactta ctccctagaa ctccttggta
1741 gagcttcaac tctgaaagat gaccagaagt ctcggataga aaagaacctc ataaatgttt
1801 taatgaatga aagtcctgat ccagaacccg actgtgatat cttagctgtg aaaactgctc
1861 agaagctgtg ggcagaccga atttctctgg ctggcagcaa tattttcaca ataggagtac
1921 aggactttgt gccatttgtg cagtgcaaag ccaagtttca tgccccaagt tttcatgttg
1981 atgttcctgt tcagtttgat atttatctga aggctgattg tccacatccc attaggtttt
2041 ccaagctctg tgtcagcttt aataatcagg aatacaacca gttctgtgta atagaagaag
2101 catccaaagc aaatgaagtt ttagaaaatc tgactcaagg aaagatgtgc ctagttcctg
2161 gcaaaacaag aaaactgtta tttaagtttg ttgcaaaaac tgaagatgtg ggaaagaaaa
2221 ttgagattac ttcagtggat cttgctctgg gcaatgagac gggaagatgt gtggttttaa
2281 attggcaggg aggaggagga gatgctgctt cctcccaaga agccttacag gcagctcggt
2341 ctttcaaaag gcgacctaag ctacctgaca atgaagttca ctgggacagc attataattc
2401 aggcaagcac aatgatcata tccagagtcc caaacatttc tgtacatctg ctacatgaac
2461 cccctgcact gactaatgaa atgtattgtt tggttgtgac tgttcagtcc catgaaaaga
2521 cccaaatcag agatgtgaag ctcaccgctg gcttaaaacc aggacaggat gccaatttaa
2581 ctcagaagac tcacgtgact cttcatggaa cagaactgtg tgatgaatcc tacccggctt
2641 tactcactga cattcctgtt ggagacttac atccagggga acagctggaa aaaatgttgt
2701 atgttcgctg tggaacagtg ggttccagaa tgtttcttgt atatgtttct tacctgataa
2761 atacaaccgt tgaagaaaaa gaaattgttt gcaagtgtca caaggatgaa actgtaacaa
2821 ttgaaacagt ctttccattt gatgttgcgg ttaaatttgt ttctaccaag tttgagcacc
2881 tggaaagggt ttatgctgac atcccctttc tgttgatgac ggacctctta agtgcctcac
2941 cctgggccct cactattgtt tccagtgagc tccagcttgc tccatccatg accacagtgg
3001 accagctcga gtctcaagtg gacaatgtta tcttacagac tggagagagt gctagtaaat
3061 gcttttgtct tcaatgccca tctcttggaa atattgaagg tggagtagca accgggcatt
3121 atattatctc ttggaaaagg acctcagcaa tggagaatat ccccatcatc acaactgtca
3181 tcactctgcc gcacgtgatt gtggagaata tccctctcca tgtgaatgca gatctgccgt
3241 catttgggcg tgtcagagag tcgttacctg tcaagtatca cctacagaat aagaccgact
3301 tagttcaaga tgtagaaatt tctgtggagc ccagtgatgc cttcatgttc tcaggtctca
3361 aacagattcg attacgtatc ctccctggca cggagcagga aatgctatat aatttctatc
3421 ctctgatggc tggataccag cagctgccat ctctcaacat caacttgctt agatttccta
3481 acttcacaaa tcagctgctc aggcgtttta tacctaccag tatttttgtc aagccacagg
3541 gtcgactcat ggatgatacc tctattgctg ctgcatgatg ttcaagaccg gcccttggct
3601 gttgttacag agatgttggg cagagctatg caggtgtttc attgtgaact ctagctttga
3661 tcatggtaaa aagttaacct tttctatttt ttaatggatg ttataccaac tattcagagg
3721 aactcatact tcaaaaatat taggaaaatc tgtcttatag tttctctaat aaatatctga
3781 aatctcagta cgacatgaaa gaatgtcaga ccattgttat tgttgaaagt catttgatga
3841 atggtaaatt ctatgaaaag taagtgattt gcatgtataa tatcaggaaa attaagcatc
3901 ccaagtgtga ctggacaaag agagcagatg caccagtgcc tgtgccataa agttccgaat
3961 cccccatgtg tctctttcag agctggccag accggaaata aatcattctc ataaattcag
4021 tgtgtactca gaacacatac acaacaacat agggagttgt atgactgata cggaaaactt
4081 ccagaaagtt ttaatcaaag cagtttaatt aaggtatcaa aaatatcttt gcttactatc
4141 aagaagtgtc aaataggttc agcttgctgc caaaatatgg atcatttatg aagcaggttc
4201 atattttaga ggtgttaata aaatcctcat cggaaaagat ccaaagtgca aggatttgat
4261 tataaacata atttcctaga ctgaaagttt ttggaaaaga tgcagggtct gagtcaggcc
4321 ttctggttat attgtgcagt ttcaaaagaa ctatttaaaa ctcttgaaaa ctcatgtaaa
4381 taaaaatcat agggtgaaaa ttgtatttgt taaaatacct taataattta aaatgacctg
4441 atttcctgga aaattttatt attcaaaagg tggaggcatt gtaaaaagga aatagtgatg
4501 taaataaaca tgttctcttt c
//