LOCUS AK096343 3567 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ39024 fis, clone NT2RP7004428, highly similar
to Cleavage and polyadenylation specificity factor 7.
ACCESSION AK096343
VERSION AK096343.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3567)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3567
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7004428"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000021198"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 91..1506
/codon_start=1
/note="highly similar to Cleavage and polyadenylation
specificity factor 7"
/protein_id="BAG53266.1"
/translation="MSEGVDLIDIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDD
RSSSTEPPPPVRQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVI
RSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPA
TRQNLSQFEAQARKRECVRVPRGGIPPRAHSRDSSDSADGRATPSENLVPSSARVDKP
PSVLPYFNRPPSALPLMGLPPPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPH
LAVPPPGAIPPALHLNPAFFPPPNATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSE
AEFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRVANDERCRVL
ISSLKDCLHGIEAKSYSVGASGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHDD
YFQERNREHERHRDRERDRHH"
BASE COUNT 867 a 966 c 835 g 899 t
ORIGIN
1 agtccggact cgccgccgcc gccgccatat tcccgtggca tcttccttac tttgtccatc
61 ctccggactc gcgatcttcc ttccggagcc atgtcagaag gagtggactt gattgatata
121 tatgctgacg aggagttcaa ccaggaccca gagttcaaca atacagatca gattgacctg
181 tatgatgatg tgctgacagc cacctcacag ccctcagatg acagaagcag cagcactgaa
241 ccacctcctc ctgttcgcca ggagccatct cccaagccca acaacaagac ccctgcaatt
301 ctgtatacct acagtggcct gcgtaataga cgagctgccg tttatgtagg cagcttctcc
361 tggtggacca cagaccagca gctgatccag gttattcgct ctataggagt ctatgatgtg
421 gtggagttga aatttgcaga gaatcgagca aatggccagt ccaaagggta tgctgaggtg
481 gtggtagcct ctgaaaactc tgtccacaaa ttgttggaac tcctaccagg gaaagttctt
541 aatggagaaa aagtggacgt gaggccggcc acccggcaga acctgtcaca gtttgaggca
601 caggctcgga aacgtgagtg tgtccgagtc ccaagagggg gaatacctcc acgggcccat
661 tcccgagatt ctagtgattc tgctgatgga cgggccacac cctctgagaa ccttgtaccc
721 tcatctgctc gtgtggataa gccccccagt gtgctgccct acttcaatcg tcctccttcg
781 gcccttcccc tgatgggtct gcccccacca ccaattccac ccccaccacc tctctcctca
841 agctttgggg tccctcctcc tcctcctggt atccactacc agcatctcat gcccccacct
901 cctcgattac ctcctcatct tgctgtacct ccccctgggg ccatcccacc tgcccttcac
961 ctcaatccag ccttcttccc cccaccaaac gctacagtgg ggcctccacc agatacttac
1021 atgaaggcct ctgcccccta taaccaccat ggcagccgag attcgggccc tccaccctct
1081 acagtgagtg aagccgaatt tgaagatatc atgaagcgaa acagagcaat ttccagcagt
1141 gccatttcca aagcagtatc tggagccagt gcaggggatt acagtgacgc aattgagacg
1201 ctgctcacag ccattgcggt tatcaaacag tcccgggttg ccaatgatga gcgttgccgt
1261 gtcctcatct cctctcttaa ggactgtctt catggcattg aagccaagtc ctacagtgtg
1321 ggtgccagtg ggagctcttc caggaaaaga catcgctccc gggaaaggtc acctagccgg
1381 tcccgggaga gcagcaggag gcaccgggat ctgcttcata atgaagatcg gcatgatgat
1441 tatttccaag aaaggaaccg ggagcatgag agacaccggg atagagaacg ggaccggcac
1501 cactgagaaa ggagtctggt tggaagcaaa tgttttttta atggacttgc atctcctcac
1561 cttgatcagg actaaaggac ggaggccgcc ccaccccctt ccctttcctc caaaccccta
1621 actccctcca gacacccagg gaataccctc tgccccacag gattgaagac tgcttggcag
1681 tcctcccaat cccacacctc ctgtttgcca ggggaaagaa cctaaagact tcgtgtgatt
1741 gggaggggtg gcagacagga agaaaacatg tccaggcccc tggtctccat agagaatggt
1801 gctttgtcca agaaaacgta tgagtttctg attctccggg agccgttcaa tggtgaggtt
1861 gatgggaaga cttccttccc aaagaaaata gatcctccat gcaggatcta ggagagtgac
1921 tgggtgtgcc aaaatatgcc cagggtcctg ccctcagcac tagatttaat ggggccaaga
1981 gggtccaaac cccttgctaa cataccactt ctttgtttaa ctcctttacc tttccagccc
2041 tttgaggagg gaccatgaga acagaaatta ccttatgaaa agctacttct gttcctgctt
2101 tccctctcac gtattgacgg tttatttctt tgacctccca gagggctgaa ctctttcaac
2161 tctgcgctgc ccagccttct cagtggactt gcccctccta agcagagaag gcctatgagg
2221 ttgcttgctg ctgggaagcc tggcagagcc aattaccacc ctctgctgct tagtgcttgg
2281 gtacctcttg caataaccag ctcttagttg ttccctttcc ctggggcttt tccatttaac
2341 acatggagcc cttcccccag aaggctactt ccttgtttta gaggaaggta ctgcccattg
2401 ggagatgggg acattgggac ctcagcaatg aagaaccctt gtgaagtaac caggaggaat
2461 ggggaaagaa gcaagttggg caggatatgg cctacttcca taggcttttc ttttttcagg
2521 tttgatgtaa gcatgggctt acatccccca ggtacatact tttacttatt gtgggataac
2581 ctggcactag taggcaggta aagtcacaaa tttggtgtct tttcaccttt tgactgttga
2641 cttaatagct cctctcactc tgcctggaga tacttcctgc ctcagatgag gagccagaag
2701 aaacagagcc cgacttgaat gaactcagct cagagttcta aggaccagca ttctgggggc
2761 cattttctct acaggcaaat ggaattgctt ttccataaca tccaaattgt aatgtggttg
2821 ctgctgaagg aggaggcagc agcgaggtcc tgcggtaccc atggggtgat gctacttctg
2881 catgcatcta cagggcatct gacacctaac atgagacgtg gcatgtgaga tgagacttgg
2941 catgtgagac atagggtcac tagagaccct tctgggtcag aggagagaga ctgaattgga
3001 ctaaacccgt cctctgttcc cagcacgttt ctcatatagc cctcagtcac tgagggagtc
3061 ccccgcagga ttggagaggc acattccctt gggacagagg ctacaggttg gagctttttt
3121 tcccctgtcc cccaacccca tccccacctc cacttcagaa catggcaccc cacccaactg
3181 gccaagtgtt aagtgatgtg cttattgaga gcaactccgg gtgtctttta aaatgtagag
3241 aaaaggtgac agtttaagga aaaatatata tagaatacca gaaatgccgt ttacccggag
3301 aatttttttc tccccatttg ttttgttttt actcaatgac accattttta gttttatttc
3361 ctgatagcaa aaggaaaaaa aacacccatc cctcaaaaag gccaaggtcc cgtccccctg
3421 ttgtcggtga tttgtttgtc tttctgatag gttgaaaatt gtgtaataaa cttgatgacg
3481 ctgtcaatct tttatactgc attgtatttt tttccttttg taacaaaata tttttaaata
3541 ataaatgggg tgtgagctgt tttatgg
//