LOCUS AK096341 3236 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ39022 fis, clone NT2RP7003724, weakly similar
to Serine/arginine repetitive matrix protein 1.
ACCESSION AK096341
VERSION AK096341.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3236)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3236
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7003724"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000021196"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 221..2002
/codon_start=1
/note="weakly similar to Serine/arginine repetitive
matrix protein 1"
/protein_id="BAG53265.1"
/translation="MESGPRAELGAGAPPAVVARTPPEPRPSPEGDPSPPPPPMSALV
PDTPPDTPPAMKNATSSKQLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMG
PRDARPPRRSSQPSPTAVPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKKAVW
LEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRS
VKKTWAEIRQQRWSWAGALHHSSPGHKTSGSRCSVSAVNLPKHVDSIINKRLSKSSAT
LWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQAVPVCPRSAS
ASPLTPCSVTRSVHRCAPAGERGERRKPNAGGSPAPVRRRPEASPVQKKEKKDKEREN
EKEKSALARERSLKKRQSLPASPRARLSASTASELSPKSKARPSSPSTSWHRPASPCP
SPGPGHTLPPKPPSPRGTTASPKGRVRRKEEAKESPSAAGPEDKSQSKRRASNEKESA
APASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREE
ATRLLAEKRRQAREQREREEQERRLQA"
BASE COUNT 714 a 1079 c 1018 g 425 t
ORIGIN
1 gaacgggttc gcgaccgcag ccgagagacc ccgggcgacc ggcacctccg agactcgcgg
61 gccacctgcc tcgaccttcc ccggagcgcc cccgcctccg agtcgctact tgccgggccg
121 ggccgggccg ggcgtgatgc gccgcgggac ccctgtcctg gccactggcc gccgccgccg
181 ccgccgctga gaccccgaga cccccagtga cgccgcagcc atggagagcg gcccgcgtgc
241 ggagctgggg gcgggcgcac ccccagctgt ggtcgccagg acccccccag agccaagacc
301 ttctccagaa ggtgaccctt cccccccacc accaccaatg tcagccctgg tccccgacac
361 tcccccggac acccctcctg ccatgaagaa tgccactagc tctaagcagc tcccactgga
421 accagagagc ccctcagggc aggtcgggcc taggccagcc cccccgcagg aagagtcccc
481 ttcctctgaa gcaaagagca gaggacccac cccaccagcc atgggcccac gggatgccag
541 acctcctcga aggagcagcc agccatctcc aacagcagtg ccagcctccg acagccctcc
601 caccaagcaa gaggtgaaga aggcaggaga gagacacaag ctggcaaagg agcggcgaga
661 agagcgggcc aagtacctgg cggccaagaa ggcagtgtgg ctggagaagg aggagaaggc
721 caaggcgctg cgggagaagc agctccagga gcgccggcgc cggctggagg agcaacgtct
781 taaagccgag caacgccgtg cagccctgga ggaacggcag cggcagaagc tcgagaaaaa
841 caaggagcgc tatgaagcag ccatccaacg gtcagtgaag aagacgtggg ccgaaatccg
901 gcagcagcgc tggtcctggg caggggccct gcaccacagc tctccaggac ataagaccag
961 tgggagcagg tgctccgtgt cggcagttaa cctgcccaaa cacgtggact ctataatcaa
1021 caagcggctc tcaaagtcct ctgccacgct ctggaactcc cccagtagaa atcgcagcct
1081 gcagctgagc gcatgggaga gcagcatcgt ggatcgtctg atgacgccca ctctctcctt
1141 ccttgctcgg agtcgcagcg cggtcacact gccccgcaac ggccgggacc aggccgtgcc
1201 ggtgtgcccg cgctcggcct ccgccagccc cctgacgccg tgcagcgtca cccgaagcgt
1261 gcaccgctgc gcccccgccg gtgagcgcgg ggagcgccgc aagcccaacg ccgggggcag
1321 ccccgctccg gtgcgccgcc ggccggaggc ctcgccggtg cagaaaaagg agaagaagga
1381 caaggagcgg gaaaacgaga aggagaagag tgccctagcc cgggagcgca gcctcaagaa
1441 gcgccagtcg ctgcccgcct ccccacgtgc ccgcctctcc gccagcaccg cctctgagct
1501 cagccccaaa tccaaggcca ggccatcctc tccctccaca tcctggcaca ggcctgcctc
1561 cccctgcccc agcccagggc caggccacac tctgcctcca aagccaccgt ccccccgagg
1621 caccactgca tcccccaagg ggcgggttcg gaggaaggag gaggcaaagg agagccccag
1681 cgccgcaggg cccgaggaca agagccagag caagcgcagg gccagtaacg agaaggagtc
1741 agcagcccca gcctcaccgg caccttcgcc ggcgccctcg cccaccccag ccccgcccca
1801 gaaggagcag ccccccgcgg agacccctac agacgctgct gtcttgacct cacccccagc
1861 ccctgctccc ccggtgaccc ctagcaaacc aatggccggc accacagacc gagaagaagc
1921 cactcggctc ttggctgaga agcggcgcca ggcccgggag cagcgggagc gcgaggagca
1981 ggagcggagg ctgcaggcat aaagggacaa gcgaatgcga gaggagcagc tggcacggga
2041 ggccgaggcc cgggcggagc gggaggcgga ggcccggagg cgggaggagc aggaggcacg
2101 agagaaggcg caggccgagc aggaggagca ggagcggctg cagaagcaga aagaggaggc
2161 cgaagctcgg tcgcgggaag aggcggagcg gcagcgtctg gagcgggaaa agcacttcca
2221 gcagcaggag caagagcggc aagagcgcag aaagcgtctg gaggagatca tgaagaggac
2281 tcggaagtca gaagtttctg aaaccaagaa gcaggacagc aaggaggcca acgccaacgg
2341 ttccagccca gagcctgtga aagctgtgga ggctcggtcc ccagggctgc agaaggaggc
2401 tgtgcagaaa gaggagccca tcccacagga gcctcagtgg agtctcccaa gcaaggagtt
2461 gccagcgtcc ctggtgaatg gcctgcagcc tctcccagca caccaggaga atggcttctc
2521 caccaacgga ccctctgggg acaagagtct gagccgaaca ccagagacac tcctgccctt
2581 tgcagaggca gaagccttcc tcaagaaagc tgtggtgcag tccccgcagg tcacagaagt
2641 cctttaagag ggtttgcctt ggatccgggc acagttgtga gggctcctct gcatcaccta
2701 ccaggatgtc tggaggagaa aaagacagaa caaagatgga agtggcctgg gcccctgggg
2761 gtgggtcctc tctgttgttt ttaatctgca ccttatagac tgatgtctct ttggccggag
2821 ccagatctgc ccctcagtgc attcgtgtgc tcgcacgcgc agacatccct tctcccccat
2881 acacacatat acactcacag cctctctggc ctcttccctt ggggaggggc cacctgtagt
2941 atttgccttg atttggtggg gtacagtgga tgtgaatact gtaaatagct tgtgctcaga
3001 ctcctctgcg tggagagggt gggtgcagga ggcagaccct ccccccaaag ccccctgggg
3061 agatcttcct ctctctattt aactgtaact gagggggatc ccaggtctgg ggatggggga
3121 caccttgggc cacaggatac tggttgcttc aggggtaccc atgccccctg ccctcgcctg
3181 gaatcagtgt tactgcatct gattaaatgt ctccagaaat aaagaataat tctgcc
//