LOCUS AK096308 2653 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ38989 fis, clone NT2RI2007629, highly similar
to Protein FAM11A.
ACCESSION AK096308
VERSION AK096308.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2653)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kanehori,K., Ishibashi,T., Chiba,Y., Fujimori,K., Hiraoka,S.,
Tanai,H., Watanabe,S., Ishida,S., Ono,Y., Hotuta,T., Watanabe,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Takahashi-Fujii,A., Oshima,A.,
Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2653
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2007629"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000021163"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 145..1197
/codon_start=1
/note="highly similar to Protein FAM11A"
/protein_id="BAG53255.1"
/translation="MNLRGLFQDFNPSKFLIYACLLLFSVLLALRLDGIIQWSYWAVF
APIWLWKLMVIVGASVGTGVWARNPQYRAEGETCVEFKAMLIAVGIHLLLLMFEVLVC
DRIERGSHFWLLVFMPLFFVSPVSVAACVWGFRHDRSLELEILCSVNILQFIFIALRL
DKIIHWPWLVVCVPLWILMSFLCLVVLYYIVWSVLFLRSMDVIAEQRRTHITMALSWM
TIVVPLLTFEILLVHKLDGHNAFSCIPIFVPLWLSLITLMATTFGQKGGNHWWFGIRK
DFCQFLLEIFPFLREYGNISYDLHHEDNEETEETPVPEPPKIAPMFRKKARVVITQSP
GKYVLPPPKLNIEMPD"
BASE COUNT 567 a 690 c 702 g 694 t
ORIGIN
1 gacggcagcg gggacggcag cggtagcggg agcagcagcg tggacgcggc tggcgctggc
61 gccatgaacc cgctgtaagg cgcaggctgt gcagcacggg gtgcggggga ggaggaggag
121 gacgccgcgg tgaagttctc cgccatgaac ctgaggggcc tcttccagga cttcaacccg
181 agtaaattcc tcatctatgc ctgtctgctg ctgttctctg tgctgctggc ccttcgtttg
241 gatggcatca tacagtggag ttactgggct gtctttgctc caatatggct gtggaagtta
301 atggtcattg ttggagcctc agttggaact ggagtctggg cacgaaatcc tcaatatcga
361 gcagaaggag aaacgtgtgt ggagtttaaa gccatgttga ttgcagtggg catccacttg
421 ctcttgttga tgtttgaagt tctggtctgt gacagaatcg agagaggaag ccatttctgg
481 ctcctggtct tcatgccgct gttctttgtt tccccggtgt ctgttgcagc ttgcgtttgg
541 ggctttcgac atgacaggtc actagagtta gaaatcctgt gttctgtcaa cattctccag
601 tttatattca ttgccttaag actggacaag atcatccact ggccctggct tgttgtgtgt
661 gtcccgctgt ggattctcat gtcctttctg tgcctggtgg tcctctacta cattgtgtgg
721 tccgtcttgt tcttgcgctc tatggatgtg attgcggagc agcgcaggac acacataacc
781 atggccctga gctggatgac catcgtcgtg ccccttctta catttgagat tctgctggtt
841 cacaaactgg atggccacaa cgccttctcc tgcatcccga tctttgtccc cctttggctc
901 tcgttgatca cgctgatggc aaccacattt ggacagaagg gaggaaacca ctggtggttt
961 ggtatccgca aagatttctg tcagtttctg cttgaaatct tcccatttct acgagaatat
1021 ggaaacattt cctatgatct ccatcacgaa gataatgaag aaaccgaaga gaccccagtt
1081 ccggagcccc ctaaaatcgc acccatgttt cgaaagaagg ccagggtggt cattacccag
1141 agccctggga agtatgtgct cccacctccc aaattaaata tcgaaatgcc agattagatg
1201 ccacttccgg ggacagagct taagtggact gggacgcact ctctccgcct tcctctgccc
1261 cctcgttcac cccgcagacc agaaccagta ctggagctgg gtctccaggt acgtccatct
1321 catgccttgt ttgcatccag cgcctatcag ccactcacca cgacgggacg cggaagtggc
1381 aggtgacggg ggtgtgtgcc agcagatgcg gatgccagga agagtgtgag aacaggggtg
1441 ggattaccgt ctgtctggga ggggctccag gtacccctct tccccgtcag acccactggg
1501 agatggctgc ttgccaggcc cccagaagga acatctgtct atacggtgct gaaatcccaa
1561 tcaaaagtat tgtttagaaa tgtatttctc cacagggctg acctcctgca gctcgctgag
1621 cactcccagg tcctcagcac tcccaggtcg tggctggggc agtcagtagg aactgtaact
1681 atgtctctga tgcaccacgt gtttagacac agcacagtcc ttttttctgt tcctactgtg
1741 gaagtagttt ctctttgggc atgctgacag cagtttttca tagcctcacg gatgagccct
1801 ttctacggga gtgactccat gcttgtatac agagtattta tacaaatgtt ttagcatctt
1861 catatgcggt gttaacccct agttctgtac agcatattct gttcaagtat ttttttacaa
1921 gcttgtgctg taggcacatg ccttctgctg cagaagtgga cgcccgtggc acactccccc
1981 cccccccccg tggggtgcca tgccttcatg ggacattgcc acttctgccc tggaactcgt
2041 gcaggtacgt agtagctgct actgccacaa cggcaacacc aagcaagaga tggtccatgc
2101 ttttctgacg ttctcagaat agtggctagc ttcaaacctg acaagcgctg cttgaagccg
2161 gaacactaga gaatgttgct gagagcagaa acggccacgc gggtcacgac tatgcgtggg
2221 aaagtctcaa gcttccctcc tgccagcaac aagaaggctt tggagtaggc atgatgtttt
2281 cacgtgtgcg tgccgtttct ccaagcactg caggttccac cgtgtgtcag aggctgcaag
2341 tttaacatcc tcctgcctga aaacaaatag gtcctttgct gaaaagaggg taaaaaaaga
2401 gctttgatct tctcagccag gagaagaggg tggtgttttc acgcgggcaa ctgctcgccg
2461 gcctacatgg ggttaattca agtctgctgc gagcacgact ccgcccttgg cactggcctc
2521 cagcaagccc tgttctcttt ggggtacagg ggaacgggat ggtttagact ttcctgctca
2581 gtgtgtaaaa aatgtagcta aagccactat ttttgctctc cttaagctgt tcaataaacc
2641 ggttcctcat ttt
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