LOCUS AK096232 2555 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ38913 fis, clone NT2NE2008017, highly similar
to Homo sapiens SEC14 and spectrin domains 1 (SESTD1), mRNA.
ACCESSION AK096232
VERSION AK096232.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2555)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kanehori,K., Ishibashi,T., Chiba,Y., Fujimori,K., Hiraoka,S.,
Tanai,H., Watanabe,S., Ishida,S., Ono,Y., Hotuta,T., Watanabe,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Takahashi-Fujii,A., Oshima,A.,
Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2555
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2008017"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000021087"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 129..2219
/codon_start=1
/note="highly similar to Homo sapiens SEC14 and spectrin
domains 1 (SESTD1), mRNA"
/protein_id="BAG53235.1"
/translation="MEASVILPILKKKLAFLSGGKDSRSGLILTIPLCLEQTNMDELS
VTLDYLLSIPSEKCKARGFTVIVDGRKSQWNVVKTVVVMLQNVVPAEVSLVCVVKPDE
FWDKKVTHFCFWKEKDRLGFEVILVSANKLTRYIEPCQLTEDFGGSLTYDHVDWLNKR
LVFEKFTKESTSLLDELALINNGSDKGNQQEKERSVDLNFLPSVDPETVLQTGHELLS
ELQQRRFNGSDGGVSWSPMDDELLAQPQVMKLLDSLREQYTRYQEVCRQRSKRTQLEE
IQQKVMQVVNWLEGPGSEQLRAQWGIGDSIRASQALQQKHEEIESQHSEWFAVYVELN
QQIAALLNAGDEEDLVELKSLQQQLSDVCYRQASQLEFRQNLLQAALEFHGVAQDLSQ
QLDGLLGMLCVDVAPADGASIQQTLKLLEEKLKSVDVGLQGLREKGQGLLDQISNQAS
WAYGKDVTIENKENVDHIQGVMEDMQLRKQRCEDMVDVRRLKMLQMVQLFKCEEDAAQ
AVEWLSELLDALLKTHIRLGDDAQETKVLLEKHRKFVDVAQSTYDYGRQLLQATVVLC
QSLRCTSRSSGDTLPRLNRVWKQFTIASEERVHRLEMAIAFHSNAEKILQDCPEEPEA
INDEEQFDEIEAVGKSLLDRLTVPVVYPDGTEQYFGSPSDMASTAENIRDRMKLVNLK
RQQLRHPEMVTTES"
BASE COUNT 781 a 492 c 612 g 670 t
ORIGIN
1 tttcctcccg ccgcgccctc cgcctccgcc cgcacctcgc tagcgttccc ctgtcttccc
61 caacgccccg gagccgccgg ccgctagcgt cagcgccagc cagaattaag gaagttcact
121 ggagtaaaat ggaggcctca gtaatattac ccattctgaa gaaaaaacta gccttccttt
181 caggaggaaa ggacagccgg agtggcctca ttttgacaat tccattatgc ctcgaacaga
241 caaatatgga tgagctgagt gtcaccttag actacctact cagcattcca agtgagaagt
301 gtaaggctag aggatttacc gtgattgtgg atggcagaaa atcacagtgg aatgtggtga
361 aaacagtagt cgtaatgcta cagaatgttg ttccagctga ggtgtccctt gtttgtgtgg
421 taaagccaga tgaattctgg gataagaaag taacgcattt ttgtttttgg aaggagaagg
481 atagacttgg ctttgaggtt attttagtgt ccgccaacaa attgactcgt tatatagaac
541 catgccaatt aacagaagat tttggtggga gtctcaccta tgatcacgtg gactggttaa
601 ataagaggct ggtttttgag aagtttacaa aggaatctac atcattatta gatgaacttg
661 ctttgattaa caatggaagt gataaaggaa atcagcaaga gaaagaaagg tctgtggatt
721 taaactttct tccatcggtt gatcctgaaa cagttcttca gacagggcat gaattgttgt
781 ccgaattaca gcagcgtcga tttaatggct cagacggagg ggtttcatgg tctcctatgg
841 atgatgaact tcttgcacag ccacaggtta tgaaattatt agattcactc cgagagcaat
901 atacccgcta ccaggaagtt tgtaggcaac gtagcaagcg cacacagtta gaagagattc
961 aacagaaggt aatgcaggtg gtgaactggc tagaagggcc tggatcagaa caactaagag
1021 cccagtgggg cattggagac tccattaggg cctcccaggc cctacagcag aaacacgaag
1081 agattgagag ccagcacagt gaatggtttg cagtgtatgt ggaacttaat cagcaaattg
1141 cagcactctt gaatgctggc gatgaggaag atcttgtgga actaaagtca ctgcagcaac
1201 aacttagtga tgtttgttat cgacaggcca gtcagctgga atttaggcaa aatctcttac
1261 aagcagctct tgaatttcat ggtgttgccc aagatttgtc tcagcagttg gatggcttat
1321 tagggatgtt gtgcgtagat gtagcaccag ctgatggagc atcgattcag caaactttaa
1381 aactgcttga agagaagctg aaaagtgttg atgtgggatt gcaaggtttg cgtgaaaaag
1441 gtcaaggtct cctggatcag atctccaatc aggcatcctg ggcctatgga aaggatgtaa
1501 ccattgaaaa taaagaaaat gtggaccaca tacaaggagt gatggaagat atgcagctta
1561 gaaaacaaag atgtgaagac atggtagatg tgcgaaggtt aaagatgctt cagatggtgc
1621 agttgtttaa atgtgaagaa gatgctgccc aggcagtaga atggctaagt gaacttctgg
1681 atgctctgct taagactcac atcagattgg gcgatgatgc tcaagaaacg aaagttttgc
1741 tggaaaagca tagaaaattt gttgatgttg cacagagcac ttatgactat ggcaggcagt
1801 tgctacaggc cacagttgtg ttatgccaat ctttgcgctg cacttctcgg tcatctgggg
1861 atacacttcc tcgactgaac agagtatgga aacaatttac aatagcatct gaagagagag
1921 tacatagatt ggaaatggct attgcatttc actcaaatgc tgaaaagatt ttgcaggact
1981 gtccagaaga gcctgaagct attaatgatg aggagcaatt tgatgaaatt gaagcagttg
2041 ggaaatcact tttggataga ttaactgttc cagtagttta tcctgatgga accgaacaat
2101 attttgggag tccaagtgac atggcttcta ctgcagaaaa catcagagac aggatgaaac
2161 tagttaatct caaaaggcag cagctgagac atcctgaaat ggtgaccaca gagagctaat
2221 agctaccagc tacctacaga tttgcagttc ataatcccgc atgttgtcaa catactacag
2281 cattagccac cacaccttaa gatgcatttc acagccaaaa taagtctcat ttcttttcat
2341 gacacatttc tctttacatg ttaacacctt gctactacca aggcataatt acttaacatg
2401 cttcgaggct gtagattcca agtatcttaa aagaaggaac tataaacatt gcactgaaaa
2461 cttgctttaa agctttacct gacctgtcag tttgtagaca aacaactgat aataagcttt
2521 gaatggtgct aataagagta ggaattctct ctatt
//