LOCUS AK096190 3381 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ38871 fis, clone MESAN2013611, highly similar
to Homo sapiens ring finger and KH domain containing 2 (RKHD2),
mRNA.
ACCESSION AK096190
VERSION AK096190.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3381)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3381
/cell_type="normal mesangial cells (NHMC56046-2)"
/clone="MESAN2013611"
/clone_lib="MESAN2"
/db_xref="H-InvDB:HIT000021045"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal mesangial cells"
/organism="Homo sapiens"
CDS 188..1582
/codon_start=1
/note="highly similar to Homo sapiens ring finger and KH
domain containing 2 (RKHD2), mRNA"
/protein_id="BAG53227.1"
/translation="MMAAMLSHAYGPGGCGAAAAALNGEQAALLRRKSVNTTECVPVP
SSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKEDVAMAKREILSAA
EHFSMIRASRNKNGPALGGLSCSPNLPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQ
THTYIVTPSRDKEPVFEVTGMPENVDRAREEIEMHIAMRTGNYIELNEENDFHYNGTD
VSFEGGTLGSAWLSSNPVPPSRARMISNYRNDSSSSLGSGSTDSYFGSNRLADFSPTS
PFSTGNFWFGDTLPSVGSEDLAVDSPAFDSLPTSAQTIWTPFEPVNPLSGFGSDPSGN
MKTQRRGSQPSTPRLSPTFPESIEHPLARRVRSDPPSTGNHVGLPIYIPAFSNGTNSY
SSSNGGSTSSSPPESRRKHDCVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCP
VCQTAVTQAIQIHS"
BASE COUNT 957 a 698 c 730 g 996 t
ORIGIN
1 agaggaggag gaccggtcgt cgctgctgct gctgtcgccg cccgcggcca ccgcctctca
61 gacccagcag atcccaggcg ggtccctggg gtctgtgctg ctgccagccg ccaggttcga
121 tgcccgggag gcggcggccg cggcggcggc ggcgggggtg ctgtacggag gggacgatgc
181 ccagggcatg atggcggcga tgctgtccca cgcctacggc cccggcggtt gtggggcggc
241 ggcggccgcc ctgaacgggg agcaggcggc cctgctccgg agaaagagcg tcaacaccac
301 cgagtgcgtc ccggtgccca gctccgagca cgtcgccgag atcgtcggcc gccagggttg
361 taaaattaaa gcactgagag ccaagacaaa cacgtatatc aagactcctg ttcgtggtga
421 agagcccatt tttgttgtca ctggaaggaa agaagatgtt gccatggcca aaagagagat
481 cctctcagct gcagagcact tctccatgat tcgtgcatct cgaaacaaaa atgggcctgc
541 cctgggagga ttatcatgta gtcctaatct gcccggtcaa accaccgtcc aagtcagggt
601 cccttatcgt gtggtaggat tagtggttgg acccaaagga gcaactatta aaagaattca
661 gcagcagacc cacacctaca tagtaactcc gagcagagat aaggaacctg tctttgaagt
721 gacagggatg cctgaaaatg ttgaccgagc acgggaagaa atagaaatgc atattgccat
781 gcgtacagga aactatatag agctcaatga agagaatgat ttccattaca atggtaccga
841 tgtaagcttt gaaggtggca ctcttggctc tgcgtggctc tcctccaatc ctgttcctcc
901 tagccgcgca agaatgatat ccaattatcg aaatgatagt tccagttctc taggaagtgg
961 ctctacagat tcctactttg gaagcaatag gctggctgac tttagtccaa caagcccatt
1021 tagcacagga aacttctggt ttggagatac actaccatct gtaggctcag aagacctagc
1081 agttgactct cctgcctttg actctttacc aacatctgct caaactatct ggactccatt
1141 tgaaccagtt aacccactct ctggctttgg gagtgatcct tctggtaaca tgaagactca
1201 gcgcagagga agtcagccat ctactcctcg tctgtctcct acatttcctg agagcataga
1261 acatccactt gctcggaggg ttaggagcga cccacctagt acaggcaacc atgttggcct
1321 tccaatatat atccctgctt tttctaatgg taccaatagt tactcctctt ccaatggtgg
1381 ttccacctct agctcacctc cagaatcaag acgaaagcat gactgtgtga tttgctttga
1441 gaatgaggtt attgctgccc tagttccatg tggccacaac ctcttctgca tggaatgtgc
1501 caacaagatc tgtgaaaaga gaacgccatc atgtccagtt tgccagacag ctgttactca
1561 ggcaatccaa attcactctt aactatatat atatacataa atactatatc tctatatgga
1621 ctcgtaaagg catgggtata atggtacccc ccagtaaact tcctaatgat ttcttatgac
1681 tgttatcagg ctttattggg attaggctaa agttgttagt aaacttataa aaggctgcta
1741 tggtaacact aaacctaagt ggtctcttgt ctattagttt ggtttgaatt attagtacta
1801 tcctgtagac ccagagacat agtttatata agaattgcta aagctgaagt tcaacttggc
1861 tgagtgaaga taatcatagg ttgtgtgagc ctatgaaaaa gtgtatacgt ctaagatttc
1921 aaaacaatgg gtcccaaagc ctaaccactt taagagttta tggagggtac ttggcattac
1981 agacgattca tacacttcca gtgctgcctt ctttacactg ccagttttga caaaacaggt
2041 ttgtttttta ttttacaaca acatatgcct aattctgcag gattgcaagt aactttttaa
2101 tgcattgtga ttacttattg gtaatgatag ggctgatggc agtttactag atcactggtt
2161 ataatttggg acaaaaactg ctacatcaac tttcatctcg cccagagtgc tcaaggctgg
2221 tatgatcagt ggatcaggaa tgcaattgtg aattcctgcc cattgcctct cttggtgaat
2281 gtggaaatgg ccacctgggt tttcccatat caggaagggc tttgggatgg cacctatatt
2341 ggctgataat tgaggatgca aacattccat tcattagtgt gatcgagctg ttaattttta
2401 gactatagat caaaatgtga aacattttat gttcaatcca tatttgtctt gcacattata
2461 aatatatttt tattttttag taatttaggg gagggaggag ggagaaaggg ataatgatgc
2521 ccttggcata attcacaaaa acagctgtga caacctccaa tcagtttact tcatttcaaa
2581 actatttcca atcacaagga aagatttatt taaaatatac tcgtacattt cacctgtgga
2641 tgtctataac ttcatcctca gtatgttccc aaatctgtgc tggcattgaa aggacaaaac
2701 attatactag tgggtttttc tactaattat tttttgaagc attattttcc caacacaaaa
2761 gagctttttt ctcggtataa tgaaaattga aatcctatgt gtattcaata gtaaatagac
2821 aaattttatt ttttatttcc acttgaagag ttacatttcg tataaaagtt tacaaataac
2881 ggtttttatt ttgatttttt cagtataaaa aaagttgcct tgatggcata ttatgatgta
2941 atgctaattg cttgtaggat agtaaatggt cagtattgaa acctaatctc tagctgccgt
3001 cttgtagata tgaacgaatg ttcaccaagc atgtattttg tattttgttg cattgtacac
3061 tgcaactaat aagccaagga atcgacatat attaggtgcg tgtactgttt ctaaaaacca
3121 caaactaaga atgataaatt atcaatatag tttagtattt gctaatttta ctacactctt
3181 ttgttatgta tatgtaggga agtcataggg attataaatt caatttgagt aaaatttaaa
3241 accatatatt ttatgataaa gggcctttaa cttaagatgg ccaaagcact gatattatat
3301 atttgctgta aagagaatta taagagtttt atttttctga tattaaaagt tacttaataa
3361 agacttgttt ccattaactt g
//