LOCUS AK096172 2793 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ38853 fis, clone MESAN2010321, highly similar
to LIM domain and actin-binding protein 1.
ACCESSION AK096172
VERSION AK096172.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2793)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2793
/cell_type="normal mesangial cells (NHMC56046-2)"
/clone="MESAN2010321"
/clone_lib="MESAN2"
/db_xref="H-InvDB:HIT000021027"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal mesangial cells"
/organism="Homo sapiens"
CDS 1272..2645
/codon_start=1
/note="highly similar to LIM domain and actin-binding
protein 1"
/protein_id="BAG53224.1"
/translation="MEQKENVPPGPEVCITHQEGEKISANENSLAVRSTPAEDDSRDS
QVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLL
ANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHK
DLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKED
KPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKL
RRPSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQV
ENAKASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFL
KQQSPQEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYY
DEDEDEE"
BASE COUNT 826 a 577 c 637 g 753 t
ORIGIN
1 tgggtcgtaa tctagaatac catcactagg tgactaagtc atactcacat tcctttcatt
61 ggcctggtgg ccataaattg tttcctccca tgcctaaaga ttcacagaga acagaaaagt
121 actagattac tacattatta gcagactaat ggtgggaaat gtctatagtc atcgacctct
181 atgtttattt tattttattt tattttttta ttttgagatg gagtttcact cttgttcccc
241 aggctggagt gcagtggcgt ggtctcggct cactgcaacc tctgcctccc tgattcaagc
301 gattctcctg cctcagcctc ccaagtagct gggattgcag gtgtgcacca ccacacgtgg
361 ctaatttttt gtatttttag tggagacggg atttcaccat gttcgccagg ctggtcttga
421 actcctgacc tcgggcgatc cgcccgcctc ggcttcccaa agtgctggga ttacaggcgt
481 gagccactgc acccaggttc tatgttgatt ttagatgtaa tagatgagtt aattgtaata
541 ttcaccccag tgtcctttgc aaggaaaaaa atgcaattat ccttattcct tatgacaata
601 aaatgcatgt tcttttatgt tgaggctctg ttatgagaag taaaataaat tatgtcttta
661 gtacaatata tgaattgtat atggaaaaac atgctttttg aaagtcccac caaaaaggtt
721 tctttatggt atcattaaat ataatttcag tttttatatg tatacatcat ccctgtctct
781 ctttccaggc cgggcattta tatatgtatg gtcagtatat tttctattat tggcacttgg
841 catctccttt cccctgctcc agaatggtct tttctgataa aactcacaag ctttgcatta
901 ccacaagctc tgctgctaga agagtgaatc acaagaatgt tgtatgctcg gggtgttctg
961 tgtgcctgtg ttgatgtgtc tgtattctaa tgagcaatcc agttttacac tagcatacag
1021 atatttaact ctgaggtatg tgtccacaaa gctgcttttg tcatttcact agtcagtggg
1081 ttttgcttgt gagagttagg gggttgattt gacccgaggc ttcttagaag aattttttaa
1141 cattccaagt ttatctaata gatgtgctat gaagagaaca gaatgatggg actttaaaaa
1201 aaatttttac agttattttt attttgtaga atgagctgaa agccagtggt ggcgaaatca
1261 aaattcataa aatggagcaa aaggagaatg tgcccccagg tcctgaggtc tgcatcaccc
1321 atcaggaagg ggaaaagatt tctgcaaatg agaatagcct ggcagtccgt tccacccctg
1381 ccgaagatga ctcccgtgac tcccaggtta agagtgaggt tcaacagcct gtccatccca
1441 agccactaag tccagattcc agagcctcca gtctttctga aagttctcct cccaaagcaa
1501 tgaagaagtt tcaggcacct gcaagagaga cctgcgtgga atgtcagaag acagtctatc
1561 caatggagcg tctcttggcc aaccagcagg tgtttcacat cagctgcttc cgttgctcct
1621 attgcaacaa caaactcagt ctaggaacat atgcatcttt acatggaaga atctattgta
1681 agcctcactt caatcaactc tttaaatcta agggcaacta tgatgaaggc tttgggcaca
1741 gaccacacaa ggatctatgg gcaagcaaaa atgaaaacga agagattttg gagagaccag
1801 cccagcttgc aaatgcaagg gagacccctc acagcccagg ggtagaagat gcccctattg
1861 ctaaggtggg tgtcctggct gcaagtatgg aagccaaggc ctcctctcag caggagaagg
1921 aagacaagcc agctgaaacc aagaagctga ggatcgcctg gccacccccc actgaacttg
1981 gaagttcagg aagtgccttg gaggaaggga tcaaaatgtc aaagcccaaa tggcctcctg
2041 aagacgaaat cagcaagccc gaagttcctg aggatgtcga tctagatctg aagaagctaa
2101 gacgaccttc ttcactgaag gaaagaagcc gcccattcac tgtagcagct tcatttcaaa
2161 gcacctctgt caagagccca aaaactgtgt ccccacctat caggaaaggc tggagcatgt
2221 cagagcagag tgaagagtct gtgggtggaa gagttgcaga aaggaaacaa gtggaaaatg
2281 ccaaggcttc taagaagaat gggaatgtgg gaaaaacaac ctggcaaaac aaagaatcta
2341 aaggagagac agggaagaga agtaaggaag gtcatagttt ggagatggag aatgagaatc
2401 ttgtagaaaa tggtgcagac tccgatgaag atgataacag cttcctcaaa caacaatctc
2461 cacaagaacc caagtctctg aattggtcga gttttgtaga caacaccttt gctgaagaat
2521 tcactactca gaatcagaaa tcccaggatg tggaactctg ggagggagaa gtggtcaaag
2581 agctctctgt ggaagaacag ataaagagaa atcggtatta tgatgaggat gaggatgaag
2641 agtgacaaat tgcaatgatg ctgggcctta aattcatgtt agtgttagcg agccactgcc
2701 ctttgtcaaa atgtgatgca cctaagcagg tatcccagca tgaaatgtaa tttacttgga
2761 agtaactttg gaaaagaatt ccttcttaaa atc
//