LOCUS AK095903 2053 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ38584 fis, clone HCHON2008989, highly similar
to Salvador homolog 1 protein (45 kDa WW domain protein).
ACCESSION AK095903
VERSION AK095903.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2053)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2053
/cell_type="chondrocytes (HC)"
/clone="HCHON2008989"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000020758"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 350..1402
/codon_start=1
/note="highly similar to Salvador homolog 1 protein (45
kDa WW domain protein)"
/protein_id="BAG53163.1"
/translation="MPSFIRHGPTIPRRTDICLPDSSPNAFSTSGDVVSRNQSFLRTP
IQRTPHEIMRRESNRLSAPSYLARSLADVPREYGSSQSFVTEVSFAVENGDSGSRYYY
SDNFFDGQRKRPLGDRAHEDYRYYEYNHDLFQRMPQNQGRHASGIGRVAATSLGNLTN
HGSEDLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLEREGLPPGWERVESSEFGTY
YVDHTNKKAQYRHPCAPSVPRYDQPPPVTYQPQQTERNQSLLVPANPYHTAEIPDWLQ
VYARAPVKYDHILKWELFQLADLDTYQGMLKLLFMKELEQIVKMYEAYRQALLTELEN
RKQRQQWYAQQHGKNF"
BASE COUNT 594 a 424 c 492 g 543 t
ORIGIN
1 aaagtttacg ggatgtaggc ggcggcggcg gtagtggtag cggttattcg gcggcccgcg
61 gcggaccatg gccctggccc ggcgtcgctg ggctttcctc acggcgtccc cgagcagcgt
121 cgcagagcgg gccgacttcc gggaaggaac tgaccagcga ctgagcggcg gccggcgcgc
181 ttagcgccct gaacatgcgg cagtccctgc gggcgacccc gggctccgga caggcggcgg
241 cggaggcggc ggctcgggag ggaaggaggc ggcggcgccg gcggaggtgg cggcggaggt
301 gcaggggaag tacgtgaaga aggagacgtc gcctctgctt cggaatctta tgccttcatt
361 catccggcat ggtccaacaa ttccaagacg aactgatatc tgtcttccag attcaagccc
421 taatgccttt tcaacttctg gagatgtagt ttcaagaaac cagagtttcc ttagaactcc
481 aattcaaaga acacctcatg aaataatgag aagagaaagc aacagattat ctgcaccttc
541 ttatcttgcc agaagtctag cagatgtccc tagagagtat ggttcttctc agtcatttgt
601 aacggaagtt agttttgctg ttgaaaatgg agactctggt tcccgatatt attattcaga
661 caattttttt gatggtcaga gaaagcggcc acttggagat cgtgcacatg aagactacag
721 atattatgaa tacaaccatg atctcttcca aagaatgcca cagaatcagg ggaggcatgc
781 ttcaggtatt gggagagttg ctgctacatc tttaggaaat ttgactaacc atggttctga
841 agatttaccc cttcctcctg gctggtctgt ggactggaca atgagaggga gaaaatatta
901 tatagatcat aacacaaata caactcactg gagccatcct cttgagcgag aaggacttcc
961 tcctggatgg gaacgagttg agtcatccga atttggaacc tattatgtag atcacacaaa
1021 taagaaggcc caatacaggc atccctgtgc tcctagtgta cctcggtatg atcaaccacc
1081 tcctgtcaca taccagccac agcaaactga aagaaatcag tcccttctgg tacctgcaaa
1141 tccatatcat actgcagaaa ttcctgactg gcttcaggtt tacgcacgag cccctgtgaa
1201 atatgaccac attctgaagt gggaactctt ccagctggct gacctggata cataccaggg
1261 aatgctaaag ttgctcttca tgaaagaatt ggagcagatt gttaaaatgt atgaagcata
1321 cagacaagcc cttcttacag agttggaaaa ccgaaagcag agacagcagt ggtatgccca
1381 acaacatgga aaaaattttt gagctgattt tttaaaaatt taagttttgt aagagcttta
1441 aaatattttc acagataaaa aattgcaaac aagtactctg gttaataaat gctgcttcct
1501 ttgtggaaat tataaaattc taactttaca tgtattttgt tattagaaat tttcttttat
1561 tgaatgagaa aaattagtct atcattttaa gagccaatat ggcaaacact ttcaaatact
1621 gtatattagg aaactgtttt ggtattcttg atggaaaaaa atgcagcgga aatgtcatta
1681 tgaacagatg ttaaatagga aattattact tgttaacttc ttacagcagt agtaccttct
1741 ttaaaaaaaa aaaagaatct gcggtatttt tttaaaaaaa aagtttactg ctgtagtgtg
1801 aaatattgtc tggaaaggga tggtttaaat attaccatga tgtagttgaa atataaaata
1861 ggatttggaa ccttattgtg ataaatattt atatatgatg tatgtttgtc tcccctctcc
1921 aaagtaagga acccagctgg gcgtggtggc tcactcctgt aatcccagca ttttgggagg
1981 ccgaggtggg tggaccgctt gagtccacga gtttaagacc agcctgggca acatggtgaa
2041 gccccatctc tac
//