LOCUS AK095897 2560 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ38578 fis, clone HCHON2007674, highly similar
to NUCLEOLIN.
ACCESSION AK095897
VERSION AK095897.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2560)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2560
/cell_type="chondrocytes (HC)"
/clone="HCHON2007674"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000020752"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 220..2121
/codon_start=1
/protein_id="BAG53161.1"
/translation="MKKAAVTPGKKAAATPAKKTVTPAKAVTTPGKKGATPGKALVAT
PGKKGAAIPAKGAKNGKNAKREDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAA
AAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDED
EEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKK
QKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRKFGYVD
FESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKE
VFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQ
NQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAF
IEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNAGSQPSKTLFVKGLSEDTTE
ETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLD
WAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGGGDHK
PQGKKTKFE"
BASE COUNT 805 a 455 c 716 g 584 t
ORIGIN
1 agtctcgagc tctcgctggc cttcgggtgt acgtgctccg ggatcttcag cacccgcggc
61 cgccatcgcc gtcgcttggc ttcttctgga ctcatctgcg ccacttgtcc gcttcacact
121 ccgccgccat catggtgaag ctcgcgaagg caggtaaaaa tcaaggtgac cccaagaaaa
181 tggctcctcc tccaaaggag gtagaagaag atagtgtaga tgaagaaagc agctgtcact
241 ccaggcaaaa aggcagcagc aacacctgcc aagaagacag ttacaccagc caaagcagtt
301 accacacctg gcaagaaggg agccacacca ggcaaagcat tggtagcaac tcctggtaag
361 aagggtgctg ccatcccagc caagggggca aagaatggca agaatgccaa gagggaagac
421 agtgatgaag aggaggatga tgacagtgag gaggatgagg aggatgacga ggacgaggat
481 gaggatgaag atgaaattga accagcagcg atgaaagcag cagctgctgc ccctgcctca
541 gaggatgagg acgatgagga tgacgaagat gatgaggatg acgatgacga tgaggaagat
601 gactctgaag aagaagctat ggagactaca ccagccaaag gaaagaaagc tgcaaaagtt
661 gttcctgtga aagccaagaa cgtggctgag gatgaagatg aagaagagga tgatgaggac
721 gaggatgacg acgacgacga agatgatgaa gatgatgatg atgaagatga tgaggaggag
781 gaagaagagg aggaggaaga gcctgtcaaa gaagcacctg gaaaacgaaa gaaggaaatg
841 gccaaacaga aagcagctcc tgaagccaag aaacagaaag tggaaggcac agaaccgact
901 acggctttca atctctttgt tggaaaccta aactttaaca aatctgctcc tgaattaaaa
961 actggtatca gcgatgtttt tgctaaaaat gatcttgctg ttgtggatgt cagaattggt
1021 atgactagga aatttggtta tgtggatttt gaatctgctg aagacctgga gaaagcgttg
1081 gaactcactg gtttgaaagt ctttggcaat gaaattaaac tagagaaacc aaaaggaaaa
1141 gacagtaaga aagagcgaga tgcgagaaca cttttggcta aaaatctccc ttacaaagtc
1201 actcaggatg aattgaaaga agtgtttgaa gatgctgcgg agatcagatt agtcagcaag
1261 gatgggaaaa gtaaagggat tgcttatatt gaatttaaga cagaagctga tgcagagaaa
1321 acctttgaag aaaagcaggg aacagagatc gatgggcgat ctatttccct gtactatact
1381 ggagagaaag gtcaaaatca agactataga ggtggaaaga atagcacttg gagtggtgaa
1441 tcaaaaactc tggttttaag caacctctcc tacagtgcaa cagaagaaac tcttcaggaa
1501 gtatttgaga aagcaacttt tatcaaagta ccccagaacc aaaatggcaa atctaaaggg
1561 tatgcattta tagagtttgc ttcattcgaa gacgctaaag aagctttaaa ttcctgtaat
1621 aaaagggaaa ttgagggcag agcaatcagg ctggagttgc aaggacccag gggatcacct
1681 aatgccggaa gccagccatc caaaactctg tttgtcaaag gcctgtctga ggataccact
1741 gaagagacat taaaggagtc atttgacggc tccgttcggg caaggatagt tactgaccgg
1801 gaaactgggt cctccaaagg gtttggtttt gtagacttca acagtgagga ggatgccaaa
1861 gctgccaagg aggccatgga agacggtgaa attgatggaa ataaagttac cttggactgg
1921 gccaaaccta agggtgaagg tggcttcggg ggtcgtggtg gaggcagagg cggctttgga
1981 ggacgaggtg gtggtagagg aggccgagga ggatttggtg gcagaggccg gggaggcttt
2041 ggagggcgag gaggcttccg aggaggcaga ggaggaggag gtgaccacaa gccacaagga
2101 aagaagacga agtttgaata gcttctgtcc ctctgctttc ccttttccat ttgaaagaaa
2161 ggactctggg gtttttactg ttacctgatc aatgacagag ccttctgagg acattccaag
2221 acagtataca gtcctgtggt ctccttggaa atccgtctag ttaacatttc aagggcaata
2281 ccgtgttggt tttgactgga tattcatata aactttttaa agagttgagt gatagagcta
2341 acccttatct gtaagttttg aatttatatt gtttcatccc atgtacaaaa ccattttttc
2401 ctacaaatag tttgggtttt gttgttgttt cttttttttg ttttgttttt gttttttttt
2461 ttttgcgttc gtggggttgt aaaagaaaag aaagcagaat gttttatcat ggtttttgct
2521 tcagcggctt taggacaaat taaaagtcaa ctctggtgcc
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