LOCUS AK095887 2829 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ38568 fis, clone HCHON2005987.
ACCESSION AK095887
VERSION AK095887.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2829)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2829
/cell_type="chondrocytes (HC)"
/clone="HCHON2005987"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000020742"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 198..2297
/codon_start=1
/protein_id="BAC04641.1"
/translation="MDISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSR
RVVVNELNNGVSRVQEECRTAKGDIEISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRT
QRKRQHTYQTRSNIEHNSQASCQNSGVQEDSDSSSEEDETVGTSDASVEDPVVEWQSE
SSSSDSSSEYSDWTADAGINLQPPKRQTRQTTRKICSSSDEENLKSLEERQKKPKQTR
KKKGGLVSIAGEPNEEWFAPQWILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKS
KIYSVNLQKQPWNKMDLREQEFVKIVGIKYEVGPPTLCCLKLAFLDPISGKMTGESFS
IKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQPEYPD
SSFQCYSVHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTALLYKPQEGE
WGAHSRDEECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRL
ENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILDT
YNKIKAEERNSTDAEEDTEIVDLDSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKE
LLSLIYEREDSEPFRQPADLLSYPGHQEQEGESSESVVPERQQDSSLSEDYQDVIDTP
VDFSTVKETLEAGNYDL"
BASE COUNT 917 a 539 c 673 g 700 t
ORIGIN
1 atgtggctaa tggtgatggt gaggtagtag aacaggtaat tgggcagcaa accaatgacc
61 aagatgagag cattcttgat ggaataatca gggagctgca gagagaacaa gacctgagac
121 taattaatga aggagatgtt ccacatttac cagttaatag agcatactct gttaatggtg
181 ctctgagaag tccaaacatg gacatatctt cttccccaaa catcaggctt cgaagacata
241 gtagtcaaat tgaaggtgtt agacaaatgc ataacaatgc tcctcggagc cagatggcca
301 ctgaaagaga tctcatggcg tggagcagaa gagtggtggt caatgaacta aataatgggg
361 ttagtagggt acaggaagaa tgtcgaactg caaaaggtga catagaaatc agtctttata
421 cagttgaaaa gaagaaaaag ccatcttaca ctactcaaag gaatgattat gagcctagct
481 gtgggcgttc tttacgcagg acacagcgca aacgtcagca tacttaccaa acacggtcca
541 acatagagca taattcacag gcatcatgtc aaaattcagg tgtacaggaa gactcagaca
601 gttcttcaga ggaagatgaa actgttggca caagtgacgc ttcggtagag gatcctgttg
661 ttgaatggca aagtgaaagt tcttccagtg actcatcaag tgaatattct gattggacag
721 cagatgctgg aataaattta caacccccaa aaagacaaac cagacagaca acacgtaaaa
781 tatgcagcag ctctgatgag gaaaatttga agtccctaga agaaaggcag aagaaaccta
841 agcagactag aaagaagaaa ggaggactgg tttctatagc aggtgagcct aatgaagaat
901 ggtttgcccc tcagtggatc ttggatacta taccccgacg ttccccattt gtcccacaaa
961 tgggagatga gcttatctat tttaggcaag gacatgaagc ttatgttcgg gctgtaagga
1021 aatcgaaaat atacagtgtt aatttacaaa aacagccatg gaacaaaatg gatctcaggg
1081 agcaagagtt tgttaagatt gtaggaatca aatatgaggt tggcccaccc acactgtgct
1141 gcttgaagct tgcatttctg gacccaattt caggcaaaat gactggagaa tctttttcca
1201 ttaagtatca tgacatgccg gatgtcattg acttccttgt gctacatcag ttttataatg
1261 aagccaaaga aaggaactgg cagattggtg atagattccg cagtataata gatgacgcct
1321 ggtggtttgg gactgtggag agtcagcagc cttttcaacc agagtatcct gatagttctt
1381 tccagtgtta cagtgttcac tgggacaata atgagagaga aaagatgagc ccatgggata
1441 tggagccaat tccagaagga actgcctttc cagatgaagt tggtgctggt gttcctgtct
1501 cccaggaaga attgactgct ttgctataca aaccccagga aggagagtgg ggggctcatt
1561 ccagagacga agaatgtgaa cgggttattc agggcatcaa ccaccttctt tccctggatt
1621 ttgccagccc ttttgctgtt ccagtggatc tcagtgccta ccccttgtat tgtactgtag
1681 ttgcttatcc aactgacctc aataccatca ggcggagact tgaaaatcgc ttttacagga
1741 gaatatcagc attaatgtgg gaggtacgct atattgaaca taatgccagg actttcaatg
1801 agccagacag tcctatagtt aaagcagcta aaattgtaac tgatgtctta cttcgattta
1861 ttggggatca gagctgtact gatatactgg atacttataa taaaattaaa gcagaagaac
1921 gaaacagtac tgatgcagag gaggatacag aaattgttga tttagattca gacggtcctg
1981 gtacttcatc tggaagaagg gtcaaatgcc gaggcagaag acagtcttta aagtgtaatc
2041 ctgatgcttg gaaaaaacaa tgcaaggaac tattgagcct catttatgaa cgtgaagact
2101 cggagccatt tcgacagcca gctgatcttc tttcttaccc aggtcatcag gagcaagagg
2161 gagaatcctc agagtctgtt gttccagaaa gacaacaaga ttcatctctt tctgaggatt
2221 atcaagatgt tatagatact cctgtggact tcagcactgt gaaagaaact ttggaagcag
2281 gaaactatga tctatagcat gatgctgcga ttatctgcct tatttgaaag tcatatcaaa
2341 aatatcatct ctgaatataa gtcagcaatc cagagtcaga agaggagaag gccacggtac
2401 agaaaacgtc taagaagcag cagcagttca ttatctagta gtggagcacc tagtccaaaa
2461 gggaagcaga aacaaatgaa gttgcagcct aaaaatgacc agaatacctc agtatctcat
2521 gccaggacta gctctccttt ctcatctcct gtttcagatg ctgctgaagg gctttcacta
2581 tatctacttg atgatgagcc agatgggcca ttttcttcat cgagcttcgg tggatatagc
2641 cgaagtggaa atagccatga cccagggaaa gccaaatcat ttcggaatag agttttgcca
2701 gttaaacaag atcactccct tgatggaccc cttacaaatg gtgatggcag agagccccgg
2761 acaggaatca agagaaaact acttagtgca tcagaagaag atgaaaacat gggaggagaa
2821 gataaagag
//